BAC Information

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BAC

Clone NameB6Ng01-092E06
Chromosome11 (Build37)3 (Build37)
Map Location 12,672,455 - 12,672,81677,875,741 - 77,876,479
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092E06.bB6Ng01-092E06.g
ACCDH904074DH904075
length408716
definitionDH904074|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E06, 5' end.DH904075|Mus musculus domesticus DNA, BAC clone: B6Ng01-092E06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(12,672,455 - 12,672,816)(77,875,741 - 77,876,479)
sequence
ttaattaactcatctttaatgagctgaatatcaacaaagattgcattttc
ctttttttttttctctttcattttttttttcattttttttaattaggtat
tttcctcgtttacattttcaatgctatcccaaaggtcccccatacccacc
cccccaatctcctacccacccactacccctttttggccctggtgttcccc
tgtactggggcatataaagtttgcatgtccaatgggcctctctttccagt
gatgaccgactaggccatcttttgatacatatgcagctaaagataagagc
tccggggtactggttagttcataatgttgttccacctacagggttgcaga
tccctttagctccttgggtaatttctctagctcccccataaggggccccg
tgacccat
gaattcaaataatatttcaaggcttgacctcacataatgcaaaatatttc
cttctgagaatatgtgaccatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatacacacacacacatataca
tatacatatacacacacatacacatatacatatgtatacatatatatgtg
tgtctgtgtgtgtgtgtgtctgtctgtgtgtctgtctgtgtgtgtctgtg
tgttggatagaattgaacatgaagaaaagagaataaggaaggctaaatat
aacaggataaggaagtactaatttgcaagcaatggacacttgttatgaaa
gaaaataataactattttttctaattctaaatgtgtcattgattttggat
tttttaattattgtggtatataagtgtaaaaaatattttctataaatttt
tctataaaaaggcttaaatttatgtgaagtttaatgtgaagttcatagaa
ttattattataatgcagaatacctatgaatttattgatgtcataattgat
gtatcagatgcatgctagactcaataggcagtcagatatcttcagcctca
cagtattctctctctcgagtgataggatctcacatccgtgctacaagctc
agtattattaactataattgaggtatgatattatgatactatatatatgt
aagcagttccatgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12672455_12672816
seq2: B6Ng01-092E06.b_97_459

seq1  TTTTCCTTTTTTTTTCTTTTAATTC-TTTTTTTTTTAATTATTATT-ATT  48
      ||||||||||||||| || |  ||| |||||||||| ||| || || |||
seq2  TTTTCCTTTTTTTTT-TTCTCTTTCATTTTTTTTTTCATTTTTTTTAATT  49

seq1  AGGTATTTTCCTCATTTACATTTTCAATGCTATCCCAAAGGTCCCCCATA  98
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTTCCTCGTTTACATTTTCAATGCTATCCCAAAGGTCCCCCATA  99

seq1  CCCACCACCCCAATCCCCTACCCACCCATTCCCCCTTTTTGGCCCTGGCG  148
      |||||| |||||||| |||||||||||| | ||||||||||||||||| |
seq2  CCCACCCCCCCAATCTCCTACCCACCCACTACCCCTTTTTGGCCCTGGTG  149

seq1  TTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTT  198
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTCCCCTGTACTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCTT  199

seq1  TGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAAAGAC  248
      | |||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  TCCAGTGATGACCGACTAGGCCATCTTTTGATACATATGCAGCTAAAGAT  249

seq1  AAGAGCTCCCGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGT  298
      ||||||||| ||||||||||||||||||| |||||||||||||| |||||
seq2  AAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTACAGGGT  299

seq1  TGCAGTTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTGGGG  348
      ||||| |||||||||||||||||||||||||||||||||| ||||  |||
seq2  TGCAGATCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCCCCATAAGGG  349

seq1  GCCATGTGACCCAT  362
      |||  |||||||||
seq2  GCCCCGTGACCCAT  363

seq1: chr3_77875741_77876479
seq2: B6Ng01-092E06.g_68_783

seq1  GAATTCAAATAATATTTCAAGGCTTGACCTCACATAATGCAAAATATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAATATTTCAAGGCTTGACCTCACATAATGCAAAATATTTC  50

seq1  CTTCTGAGAATATGTGACC--------ATATATATATATATATATATATA  92
      |||||||||||||||||||        |||||||||||||||||||||||
seq2  CTTCTGAGAATATGTGACCATATATATATATATATATATATATATATATA  100

seq1  TATATATATATATATATATATATATATATATACACACACACACATATACA  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATACACACACACACATATACA  150

seq1  TATACATATACACACACATACACATATACATATGTATACATATATATGTG  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATACACACACATACACATATACATATGTATACATATATATGTG  200

seq1  TGTCTGTGTGTGTGTGTGTCTGTCTGTGTGTCTGTCTGTGTGTGTCTGTG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGTGTGTGTGTGTCTGTCTGTGTGTCTGTCTGTGTGTGTCTGTG  250

seq1  TGTTGGATAGAATTGAACATGAAGAAAAGAGAATAAGGAAGGCTAAATAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGATAGAATTGAACATGAAGAAAAGAGAATAAGGAAGGCTAAATAT  300

seq1  AACAGGATAAGGAAGTACTAATTTGCAAGCAATGGACACTTGTTATGAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATAAGGAAGTACTAATTTGCAAGCAATGGACACTTGTTATGAAA  350

seq1  GAAAATAATAACTATTTTTTCTAATTCTAAATGTGTCATTGATTTTGGAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATAACTATTTTTTCTAATTCTAAATGTGTCATTGATTTTGGAT  400

seq1  TTTTTAATTATTGTGGTATATAAGTGTAAAAAATATTTTCTAATAAAATT  442
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  TTTTTAATTATTGTGGTATATAAGTGTAAAAAATATTTTCTA--TAAATT  448

seq1  TTTCTAATAAAAAGGCTTAAAATTTAATGTGAAGTTTAATGTGAAGTTTC  492
      ||||| |||||||||||||||  || |||||||||||||||||||| |||
seq2  TTTCT-ATAAAAAGGCTTAAA--TTTATGTGAAGTTTAATGTGAAG-TTC  494

seq1  ATAGAATTTATTAATTATAATGCAGAAATTAACCTATGAAAATTTTATTG  542
      |||||| ||||| ||||||||||||||    |||||||||   |||||||
seq2  ATAGAA-TTATT-ATTATAATGCAGAA---TACCTATGAA---TTTATTG  536

seq1  ATTGTCATAAAATTGATGTATCAGATTGCATGGCTTAGAACTCAATAGGC  592
      | ||||||  ||||||||||||||| ||||||   ||| |||||||||||
seq2  A-TGTCAT--AATTGATGTATCAGA-TGCATG--CTAG-ACTCAATAGGC  579

seq1  AGTCCAGATTATCTTCAGCCTCACAGTAATTCTCTCTCTCAAGTGATAGG  642
      ||| |||| |||||||||||||||||| |||||||||||| |||||||||
seq2  AGT-CAGA-TATCTTCAGCCTCACAGT-ATTCTCTCTCTCGAGTGATAGG  626

seq1  ATCTCACATCCGTGCTACCAAGCTCAGTATTTATTTAACTATTAATTTTA  692
      ||||||||||||||||| |||||||||||||   ||||||||  | || |
seq2  ATCTCACATCCGTGCTA-CAAGCTCAGTATT--ATTAACTAT--AATTGA  671

seq1  GGTATGATATTAATGATACTATATATATGTAAGCAGTTTCCATGATA  739
      ||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  GGTATGATATT-ATGATACTATATATATGTAAGCAG-TTCCATGATA  716