BAC Information

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BAC

Clone NameB6Ng01-092H18
Chromosome3 (Build37)
Map Location 118,917,301 - 118,918,296
singlet/doubletsinglet
Overlap geneDpyd
Upstream genenone
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092H18.bB6Ng01-092H18.g
ACCDH904236DH904237
length991101
definitionDH904236|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H18, 5' end.DH904237|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccattttagatttctctggtgtttcctgttattattgcaaaaa
tataaatatttgctttttctgtaaaagctgtgtttgttgttgctgctctg
ctattttttgtttttgtttttgttttttgttgttgttgttgtttgttttg
ttttgtttgttttgtttttttcattttacatctccaattagcttcatttg
tttcttctcattcctctcagaggaggatggcaggaaacctgtctggggtc
agtcataccattgggtcttttagcaaatttgaagtgttcacccatggctt
cctgacctgagaccactagaaaatattttcttactgcatcttagttacag
gttggcagcttgtcagcaacagctggacacttttgttctctatccactcc
tgttcttgtcatatcctcaactgtaggagaataatgaggcagtcacataa
cttataaagtataaccttcaaaaactgcagcattgggaaattgcctagca
acttgctggccactttggacctctctgttaccttttgactgctaactgtc
taacacctctgaaaggcacaccatgtctacagaggaggtaacacttccaa
aacaggaacattttaagccacaatcaaagaatatcctttgtatctttgta
tttttaaactgattgagtcatgaaataaatgatgcaaactcttacatggc
acattagtcagagtttttcacacagagcgaacaggatgatcacacactaa
acacataaacagtgctgtcagttttttaaaagggctcatgatggcagtgt
gcttaggaccagagctgagcatctttaaaataaaacagggtaggtatgaa
gcaaagtattgacaggtaggagtggcaattccaatactgtacacatggct
attatatggcagatacactaagaggtcaataacttaggtaaagaagcatt
ttgtaggtagatgggaaccaagcagacacgaatgtacctta
cttgtctggcctcagtgggaaaggatgtgcctaatcctgtagagacttga
tgccccagagaagagggatgcagagtggagtgagatgggggtgggagggt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118917301_118918296
seq2: B6Ng01-092H18.b_48_1038

seq1  GAATTCACCATTTTAGATTTCTCTGGTGTTTCCTGTTATTATTGCAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTTTAGATTTCTCTGGTGTTTCCTGTTATTATTGCAAAAA  50

seq1  TATAAATATTTGCTTTTTCTGTAAAAGCTGTGTTTGTTGTTGCTGCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATTTGCTTTTTCTGTAAAAGCTGTGTTTGTTGTTGCTGCTCTG  100

seq1  CTATTTTTTGTTTTTGTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTTGTTTTTGTTTTTGTTTTTTGTTGTTGTTGTTGTTTGTTTTG  150

seq1  TTTTGTTTGTTTTGTTTTTTTCATTTTACATCTCCAATTAGCTTCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTTGTTTTTTTCATTTTACATCTCCAATTAGCTTCATTTG  200

seq1  TTTCTTCTCATTCCTCTCAGAGGAGGATGGCAGGAAACCTGTCTGGGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTCATTCCTCTCAGAGGAGGATGGCAGGAAACCTGTCTGGGGTC  250

seq1  AGTCATACCATTGGGTCTTTTAGCAAATTTGAAGTGTTCACCCATGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATACCATTGGGTCTTTTAGCAAATTTGAAGTGTTCACCCATGGCTT  300

seq1  CCTGACCTGAGACCACTAGAAAATATTTTCTTACTGCATCTTAGTTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTGAGACCACTAGAAAATATTTTCTTACTGCATCTTAGTTACAG  350

seq1  GTTGGCAGCTTGTCAGCAACAGCTGGACACTTTTGTTCTCTATCCACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAGCTTGTCAGCAACAGCTGGACACTTTTGTTCTCTATCCACTCC  400

seq1  TGTTCTTGTCATATCCTCAACTGTAGGAGAATAATGAGGCAGTCACATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGTCATATCCTCAACTGTAGGAGAATAATGAGGCAGTCACATAA  450

seq1  CTTATAAAGTATAACCTTCAAAAACTGCAGCATTGGGAAATTGCCTAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAGTATAACCTTCAAAAACTGCAGCATTGGGAAATTGCCTAGCA  500

seq1  ACTTGCTGGCCACTTTGGACCTCTCTGTTACCTTTTGACTGCTAACTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTGGCCACTTTGGACCTCTCTGTTACCTTTTGACTGCTAACTGTC  550

seq1  TAACACCTCTGAAAGGCACACCATGTCTACAGAGGAGGTAACACTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCTCTGAAAGGCACACCATGTCTACAGAGGAGGTAACACTTCCAA  600

seq1  AACAGGAACATTTTAAGCCACAATCAAAGAATATCCTTTGTATCTTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAACATTTTAAGCCACAATCAAAGAATATCCTTTGTATCTTTGTA  650

seq1  TTTTTAAACTGATTGAGTCATGAAATAAATGATGCAAACTCTTACATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAACTGATTGAGTCATGAAATAAATGATGCAAACTCTTACATGGC  700

seq1  ACATTAGTCAGAGTTTTTCACACAGAGCGAACAGGATGATCACACACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTCAGAGTTTTTCACACAGAGCGAACAGGATGATCACACACTAA  750

seq1  ACACATAAACAGTGCTGTCAGTTTTTT-AAAGGGCTCATGATGGCAGTGT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACACATAAACAGTGCTGTCAGTTTTTTAAAAGGGCTCATGATGGCAGTGT  800

seq1  GCTTAGGACCAGAGCTGAGCATCTTTAAAATAAAACAGGGTAGGTATGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGACCAGAGCTGAGCATCTTTAAAATAAAACAGGGTAGGTATGAA  850

seq1  GCAAAGTTATTGACAGGTAGGAGTGGCAA-TCCAATACTGTACACATGGC  898
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  GCAAAG-TATTGACAGGTAGGAGTGGCAATTCCAATACTGTACACATGGC  899

seq1  TATTATATGGCAGATACACTACAGAGGTCAATAACTTAGGTAAAGAAGGC  948
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  TATTATATGGCAGATACACTA-AGAGGTCAATAACTTAGGTAAAGAA-GC  947

seq1  ATTTTGTAGGCTAGATTGGGAACCCAAGCAAGACACGATGGTACCTTA  996
      |||||||||| |||| |||||| |||||| ||||||||  ||||||||
seq2  ATTTTGTAGG-TAGA-TGGGAA-CCAAGC-AGACACGAATGTACCTTA  991