BAC Information

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BAC

Clone NameB6Ng01-092I06
Chromosome3 (Build37)
Map Location 130,620,609 - 130,621,521
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc109b, Sec24b, EG668844, EG668845, Col25a1, Agxt2l1, 2310008M10Rik, Rpl34, LOC546811
Downstream geneLOC545568, Lef1, 6720418B01Rik, Hadh, Cyp2u1, Sgms2, LOC100043443, Papss1, Olfr375-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092I06.b
ACCDH904260
length974
definitionDH904260|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I06, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcatagtctttttcagttcacaatgagtacagagactggtgtg
agtcggtccttctgcttcaaacctttctaagagcacagaggccagtttaa
gtaattaattattcaggtataacataccaaggctatacaacaaaaatgga
gatcaggtaattattcatgaacgtaaagtgtgtggaatcaattaaaagca
gcggggcgacttaaaaaactaagctcctaactttgatttctctacttggg
gtcatctccaattgtgtgtgctctgtgaccttgctctcatatttgatgct
agtgataatctccaaggattttagggacatgaatttcttaagagaaagtc
tcagtattcagtccacgttgttaagacttcaatagagagaaagagaacaa
tttggtccagggattgttgggagccgccctcacatttgccattataagat
ggcgctgacagctgtgttctaagtggtaaacataatctgcacacgtgcag
gggcagttttcccgccatgtgttctgcctttctcgtgatgacaactgggc
cgatgggctgcagccaatcagggagtaatacgtcctaggcggaggataat
tctccttaaaagggacggggttttgccatgctttttctctctctttctct
tgctttcttgctctctcttgctctcttgctctctggctctctggctcctg
aagatgtaagcaataaagttttgccgcagaagattccggtttgttgcgtt
cttcctggccggtcgtgaacgcgggtaagagttggtgccggaaacccggg
aagagaaaacccgggacggaaactaccatcaccggcgcaaggaagattcc
tcattccggaaccagaactgcgggtcacggtataaagtgtcccgtaaaac
agactgttgagaaggatccagcgtggattcagaactcttcagctgggaat
ggtggtaatgaagtgttcccacaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_130620609_130621521
seq2: B6Ng01-092I06.b_41_950

seq1  GAATTCCTCATAGTCTTTTTCAGTTCACAATGAGTACAGAGACTGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATAGTCTTTTTCAGTTCACAATGAGTACAGAGACTGGTGTG  50

seq1  AGTCGGTCCTACTGCTTCCAAACCTTTCTAAGAGCACAGAGGCCAGTTTA  100
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  AGTCGGTCCTTCTGCTT-CAAACCTTTCTAAGAGCACAGAGGCCAGTTTA  99

seq1  AGTAATTAATTATTCAGGTATAACATACCAAGGCTATACAACAAAAATAG  150
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTAATTAATTATTCAGGTATAACATACCAAGGCTATACAACAAAAATGG  149

seq1  AGATCAGGTAATTATTCATGAACGTAAAGTGTGTGGAATCAATTAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGTAATTATTCATGAACGTAAAGTGTGTGGAATCAATTAAAAGC  199

seq1  AGCGGGGCGACTTAAAAAACTAAGCTCCTAACTTTGATTTCTCTACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGGCGACTTAAAAAACTAAGCTCCTAACTTTGATTTCTCTACTTGG  249

seq1  GGTCATCTCCAATTGTGTGTGCTCTGTGACCTTGCTCTCATATTTGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTCCAATTGTGTGTGCTCTGTGACCTTGCTCTCATATTTGATGC  299

seq1  TAGTGATAATCTCCAAGGATTTTAGGGACATGAATTTCTTAAGAGAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATAATCTCCAAGGATTTTAGGGACATGAATTTCTTAAGAGAAAGT  349

seq1  CTCAGTATTCAGTCCACGTTGTTAAGACTTCAATAGAGAGAAAGAGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATTCAGTCCACGTTGTTAAGACTTCAATAGAGAGAAAGAGAACA  399

seq1  ATTTGGTCCAGGGATTGTTGGGAGCCGCCCTCACATTTGCCATTATAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCCAGGGATTGTTGGGAGCCGCCCTCACATTTGCCATTATAAGA  449

seq1  TGGCGCTGACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCTGACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCA  499

seq1  GGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGATGACAACTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGATGACAACTGGG  549

seq1  CCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAA  599

seq1  TTCTCCTTAAAAGGGACGGGGTTTTGCCATGCTTTTTCTCTCTCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTAAAAGGGACGGGGTTTTGCCATGCTTTTTCTCTCTCTTTCTC  649

seq1  TTGCTTTCTTGCTCTCTCTTGCTCTCTTGCTCTCTGGCTCTCTGGCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTTGCTCTCTCTTGCTCTCTTGCTCTCTGGCTCTCTGGCTCCT  699

seq1  GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGT  749

seq1  TCTTCCTGGCCGGTCGTGAACGCGGGTAAGAGTTGGTGCCGGAAACCCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGGCCGGTCGTGAACGCGGGTAAGAGTTGGTGCCGGAAACCCGG  799

seq1  GAAGAGAAAACCCGGGACGGAAACTACCATCACCGGCGCAAGGAAGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAACCCGGGACGGAAACTACCATCACCGGCGCAAGGAAGATTC  849

seq1  CTCATTCCGGAACCAGAACTGCGGGTCACGGTAATAAAGTGTTCCCGTAA  900
      |||||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  CTCATTCCGGAACCAGAACTGCGGGTCACGGT-ATAAAGTG-TCCCGTAA  897

seq1  AACAGACTGTTGA  913
      |||||||||||||
seq2  AACAGACTGTTGA  910