BAC Information

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BAC

Clone NameB6Ng01-093F15
Chromosome3 (Build37)
Map Location 76,250,160 - 76,429,617
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093F15.bB6Ng01-093F15.g
ACCDH904865DH904866
length8471,075
definitionDH904865|Mus musculus domesticus DNA, BAC clone: B6Ng01-093F15, 5' end.DH904866|Mus musculus domesticus DNA, BAC clone: B6Ng01-093F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,428,777 - 76,429,617)(76,250,160 - 76,251,238)
sequence
gaattcacaccagtaattttataaatataaaaatgggctcaggatggtca
cagatgaaaaataaatattatctaaagtggtttactctgttttgttcatt
tctaattttccagtagaaaaataatccttttggatgtatgcaatcattat
gaaattttggcaaagaatgataattgtatgacaattgcccatattgaatt
taaaggtcataactgtatcacacagctattagtatcaaatgagatatagg
ggcacagatttagcagaatgattggcacccagtaatatttaaagaacagt
tgagaatttcatgatgctatctgtctaggatatgatgggcaacatgggtg
agaagtcaactcatcattatattcattttttttcttgaacctaatttggt
ccctcattctgtgctaaacttctcgtttccctattatatccagttttata
tcatttccccaagaattcatgatcccacttaaatttaagttttgattttc
ttgaagaattttttttaaatagtctgttacttgagagtacaccaggagat
ttctgtctgtgttcacagtagaatgaaatgccattctcattattctacac
aagcagtgtactgctcttgaatactgtagcacatgatatcatctgaatta
taccacctcgattcataaatatttaagtaaactgatacctactattcaac
cccatcataaaaatattttgaaaatttaatatagtttaagtctgcttcat
taattttgaaaaacatttaaaatactgattacctttgatacctaaaacca
tacaaggacccaaacaaaaaaagagaacttcctccaatctcgcttat
gaattcataagttcctttttgtgaaattacttccaaatttatccttgctt
tttctaggcatcatttgtaattataaggttcttactatatccggtgttaa
tttaaatgttttcattgtttatattttgattacctctcctttcaagagat
gtttgtctagttattggactaatagctagtatgaattttaattttcatag
atatgtacaatttttcaatattgttaataccttgaagcccaccacttagt
ttgtgtgcctaatctagttttcttaaaatcatttctttttgagataagat
gcagtacaaattcaatatccattttgttacattcctacttattaatttat
tttaaaatatattttatttgttgaagcaagatcacaactggatgagactg
gattacaactctctatatgatgtataatatataacatctttgaattcctg
attctcctacttcagtcaactaagtattgggattacagctgtgtatatga
catatcactagaaatttttattagtactatggattattaaattgcagagt
atgacaggtgaacactccagtactgagttatttaatcagccttctgtttt
tttttaaagtgtagaactagagagagtgcaatcagtgcccattggacact
agacctgtgctctcactttgaactatgctcccagttcaagaatttgcttt
ttactgtaaaatatatctcacatatatttagaaagagagatggacagaga
gagagagcgagagagagacagagatagagacagagacagagtgattctgt
gtgtgtgtgctcttagttttatggcacacacatgtgtgcatttgtaatta
tttgctttaacatggagtcccaaagtctatataggttaatgcagcatgtt
tgctggccctttctctcagcttcctacatgctgcattacagataagctac
tgtactcacccattatttatgtgaaggctggagatctggatactggtttc
acttcccagttgagtctttgtcaactaacctcataggcatttttatggac
caatatttaaaaataaaaggtagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76428777_76429617
seq2: B6Ng01-093F15.b_44_890 (reverse)

seq1  ATAAGCGAGATTGGATGAAGTTCTC-TTTTTTGTTTGGGTCCTTGTATGG  49
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  ATAAGCGAGATTGGAGGAAGTTCTCTTTTTTTGTTTGGGTCCTTGTATGG  50

seq1  -TTTAGGTATC-AAGGTAATCAGTATTTTAAAATGTTTTCAAAATTAATG  97
       |||||||||| ||||||||||||||||||||   |||||||||||||||
seq2  TTTTAGGTATCAAAGGTAATCAGTATTTTAAATGTTTTTCAAAATTAATG  100

seq1  -AGCAGACTTAAACTATATTAAATTTTC-AAATATTTTTATGAT-GGGTT  144
       ||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  AAGCAGACTTAAACTATATTAAATTTTCAAAATATTTTTATGATGGGGTT  150

seq1  GAATAGTAGGTATCAGTTTACTTAAATATTTATGAATCGAGGTGGTATAA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTAGGTATCAGTTTACTTAAATATTTATGAATCGAGGTGGTATAA  200

seq1  TTCAGATGATATCATGTGCTACAGTATTCAAGAGCAGTACACTGCTTGTG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGATATCATGTGCTACAGTATTCAAGAGCAGTACACTGCTTGTG  250

seq1  TAGAATAATGAGAATGGCATTTCATTCTACTGTGAACACAGACAGAAATC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAATGAGAATGGCATTTCATTCTACTGTGAACACAGACAGAAATC  300

seq1  TCCTGGTGTACTCTCAAGTAACAGACTATTTAAAAAAAATTCTTCAAGAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTGTACTCTCAAGTAACAGACTATTTAAAAAAAATTCTTCAAGAA  350

seq1  AATCAAAACTTAAATTTAAGTGGGATCATGAATTCTTGGGGAAATGATAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAACTTAAATTTAAGTGGGATCATGAATTCTTGGGGAAATGATAT  400

seq1  AAAACTGGATATAATAGGGAAACGAGAAGTTTAGCACAGAATGAGGGACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGATATAATAGGGAAACGAGAAGTTTAGCACAGAATGAGGGACC  450

seq1  AAATTAGGTTCAAGAAAAAAAATGAATATAATGATGAGTTGACTTCTCAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGTTCAAGAAAAAAAATGAATATAATGATGAGTTGACTTCTCAC  500

seq1  CCATGTTGCCCATCATATCCTAGACAGATAGCATCATGAAATTCTCAACT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTGCCCATCATATCCTAGACAGATAGCATCATGAAATTCTCAACT  550

seq1  GTTCTTTAAATATTACTGGGTGCCAATCATTCTGCTAAATCTGTGCCCCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTAAATATTACTGGGTGCCAATCATTCTGCTAAATCTGTGCCCCT  600

seq1  ATATCTCATTTGATACTAATAGCTGTGTGATACAGTTATGACCTTTAAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCATTTGATACTAATAGCTGTGTGATACAGTTATGACCTTTAAAT  650

seq1  TCAATATGGGCAATTGTCATACAATTATCATTCTTTGCCAAAATTTCATA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGGGCAATTGTCATACAATTATCATTCTTTGCCAAAATTTCATA  700

seq1  ATGATTGCATACATCCAAAAGGATTATTTTTCTACTGGAAAATTAGAAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGCATACATCCAAAAGGATTATTTTTCTACTGGAAAATTAGAAAT  750

seq1  GAACAAAACAGAGTAAACCACTATAGATAATATTTATTTTTCATCTGTGA  794
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAACAAAACAGAGTAAACCACTTTAGATAATATTTATTTTTCATCTGTGA  800

seq1  CCATCCTGAG-GTATATTTATGATTTATAAAATTACTGGTGTGAATTC  841
      ||||||||||   || ||||| ||||||||||||||||||||||||||
seq2  CCATCCTGAGCCCATTTTTAT-ATTTATAAAATTACTGGTGTGAATTC  847

seq1: chr3_76250160_76251238
seq2: B6Ng01-093F15.g_67_1141

seq1  GAATTCATAAGTTCCTTTTTGTGAAATTACTTCCAAATTTATCCTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGTTCCTTTTTGTGAAATTACTTCCAAATTTATCCTTGCTT  50

seq1  TTTCTAGGCATCATTTGTAATTATAAGGTTCTTACTATATCCGGTGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGCATCATTTGTAATTATAAGGTTCTTACTATATCCGGTGTTAA  100

seq1  TTTAAATGTTTTCATTGTTTATATTTTGATTACCTCTCCTTTCAAGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTTTTCATTGTTTATATTTTGATTACCTCTCCTTTCAAGAGAT  150

seq1  GTTTGTCTAGTTATTGGACTAATAGCTAGTATGAATTTTAATTTTCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTAGTTATTGGACTAATAGCTAGTATGAATTTTAATTTTCATAG  200

seq1  ATATGTACAATTTTTCAATATTGTTAATACCTTGAAGCCCACCACTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACAATTTTTCAATATTGTTAATACCTTGAAGCCCACCACTTAGT  250

seq1  TTGTGTGCCTAATCTAGTTTTCTTAAAATCATTTCTTTTTGAGATAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCCTAATCTAGTTTTCTTAAAATCATTTCTTTTTGAGATAAGAT  300

seq1  GCAGTACAAATTCAATATCCATTTTGTTACATTCCTACTTATTAATTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACAAATTCAATATCCATTTTGTTACATTCCTACTTATTAATTTAT  350

seq1  TTTAAAATATATTTTATTTGTTGAAGCAAGATCACAACTGGATGAGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATATTTTATTTGTTGAAGCAAGATCACAACTGGATGAGACTG  400

seq1  GATTACAACTCTCTATATGATGTATAATATATAACATCTTTGAATTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAACTCTCTATATGATGTATAATATATAACATCTTTGAATTCCTG  450

seq1  ATTCTCCTACTTCAGTCAACTAAGTATTGGGATTACAGCTGTGTATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTACTTCAGTCAACTAAGTATTGGGATTACAGCTGTGTATATGA  500

seq1  CATATCACTAGAAATTTTTATTAGTACTATGGATTATTAAATTGCAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACTAGAAATTTTTATTAGTACTATGGATTATTAAATTGCAGAGT  550

seq1  ATGACAGGTGAACACTCCAGTACTGAGTTATTTAATCAGCCTTCTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGGTGAACACTCCAGTACTGAGTTATTTAATCAGCCTTCTGTTTT  600

seq1  TTTTTAAAGTGTAGAACTAGAGAGAGTGCAATCAGTGCCCATTGGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGTGTAGAACTAGAGAGAGTGCAATCAGTGCCCATTGGACACT  650

seq1  AGACCTGTGCTCTCACTTTGAACTATGCTCCCAGTTCAAGAATTTGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGTGCTCTCACTTTGAACTATGCTCCCAGTTCAAGAATTTGCTTT  700

seq1  TTACTGTAAAATATATCTCACATATATTTAGAAAGAGAGATGGACAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAAAATATATCTCACATATATTTAGAAAGAGAGATGGACAGAGA  750

seq1  GAGAGAGCGAGAGAGAGACAGAGATAGAGACAGAGACAGAGTGATTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCGAGAGAGAGACAGAGATAGAGACAGAGACAGAGTGATTCTGT  800

seq1  GTGTGTGTGCTCTTAGTTTTATGGCACACACATGTGTGCATTTGTAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCTCTTAGTTTTATGGCACACACATGTGTGCATTTGTAATTA  850

seq1  TTTGCTTTAACATGGAGTCCCAAAGTCTATATAGGTTAATGCAGCATGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTAACATGGAGTCCCAAAGTCTATATAGGTTAATGCAGCATGTT  900

seq1  TGCTGGCCCTTTCTCTCAGCTTCCTACATGCTGCAATTACAGATAAGCTA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGCTGGCCCTTTCTCTCAGCTTCCTACATGCTGC-ATTACAGATAAGCTA  949

seq1  CTGTACTCACCCATTATTTATGTGAAGGCTGGAGATCTGAATACTGGTTT  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGTACTCACCCATTATTTATGTGAAGGCTGGAGATCTGGATACTGGTTT  999

seq1  CAACTTCCCAGTTGAGTTCTTTGTCAACTAACCTCCATAAGGCA-TTTTA  1049
      | |||||||||||||| ||||||||||||||||| ||| ||||| |||||
seq2  C-ACTTCCCAGTTGAG-TCTTTGTCAACTAACCT-CAT-AGGCATTTTTA  1045

seq1  TGGAACAATATTTAAAAATAAAAGGTAGCA  1079
      |||| |||||||||||||||||||||||||
seq2  TGGACCAATATTTAAAAATAAAAGGTAGCA  1075