BAC Information

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BAC

Clone NameB6Ng01-093M24
Chromosome3 (Build37)
Map Location 32,033,075 - 32,238,278
singlet/doubletdoublet
Overlap geneKcnmb2, LOC665514, Zmat3
Upstream geneCldn11, Slc7a14, LOC625125
Downstream gene4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13, Pex2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093M24.bB6Ng01-093M24.g
ACCDH905194DH905195
length1,1131,011
definitionDH905194|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M24, 5' end.DH905195|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,033,075 - 32,034,184)(32,237,283 - 32,238,278)
sequence
gaattctctactttcctctgatctctggagcagcctcagttcccgtgctt
ttcacatttagatgggacacacagtgagccaagagggtagttggagtgag
ctaactagtgagagaggggtggagccaagcaacaactggcctcaatcctc
acaggagtggccttgtatttctcttcaccctgttgctccttccttatgca
tacgattatgaacagagatttcggtcccttgaagttgaaagttcactagg
gaaagggcacaagcactctgtccacactcccatagccaggtcttcttaag
agagtctcaactgacccaagttcaagcaccatcactcattgttctttatg
ccccatttcatggcctctccaattttattcatgtcttatctttgaggcct
agatcaggtccagttgaaaccactggcacctagttttgatggccccttgg
ttcatccttagagagctaaccttctgctctgtaactggaggaagaagcct
agaaaagaaggtaagaccctggagctctacaggtacaaaaacagcattaa
tcctgctcacaaaaactctgttctctgaagtcccacctcaaaagtaccca
tgaaattaaagtggcattcagacaagggctgggcatgtagcttagtgagt
agaacgcttgtctggcatgcagtttcaccaccagcaccaatgaaccactg
tggtagtgcagtgcacaccagtagtcctaggaccaaggaaaagtaaactg
ggaggtcagatgttttctaggtcatcctaagctacatattaaatttgaga
cccatctgggaaagaagggaagggcagagagaaataatctaatcttaata
actcttgataaaatagattttttagtaattatattacactagaaatatta
gattatttaattggaaataacttcttgagagaagttacctgccatcatca
gacatattaagtaaacatgaacattttgtacccaaacaagcacactgcag
agaatgtggctcttgtcagaaaggctgttcctgaccataaacacaattta
tttacaaatgacaaggccaaaaaataaatagaccatttcgggcttgagtt
ttgaatacaagaa
gaattcaggtttctagtctcccagtgcccttaatggatgttagggacgtg
taggcgtggtttcttttagagtgaaacgttagatttatagtgtcacttct
gtatttctttgcactagagagagtgatgcgttggttttatgacactccag
tgccaggctacctgtgagaactcggtttgtttctgaactctgcaagtctt
taagtagctgctatggtcattgatagaggtgctgtgggtttccgaagcac
ttggaagttccctggctgaggctctgttgtctttacttgtattcggtggg
tagggcagaggccatcagaactgcacggtgcagtttctcactaagcgaat
gctgtctggacagtgtcccttccttgtccgatcaagctatggcggcatca
gagtcagtcaggcgagctacctgttggcttcattttgctgtaggattgga
cccccgtcccccaggaagcctgtatattatggtgtgttacagtcatggat
ggacagagtgtagacaaatggagaccttagtccaaaattaaggagatttc
agtgtcatcaattatttgtagcattgaagtctgttcttgtggctctctgc
tgctgcttctttttttgtttgttttttgggtttttttttgtttgtttgtt
ttgtttttttgtttgtttgagacagggtttctctgtatagctttggctgt
cctgggactcactttgtagaccaggctggcctccaactcagaaatccgcc
tgcctctgcttcccaagtgctggggattaaaggcgtgtgccacaaccgcc
cgggtggcctctctgctttcatgattgaagccagttcagaacacccagag
cccaaggcttcaaggaagagtctggtttcaagtcagatggtctgcatccc
actggccttcagaaggccattagcttttgaggttcagctaaatcctggtg
tggcttgaccttttagaactttacatggagtacgaaaactttgctggttc
tgaagttgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32033075_32034184
seq2: B6Ng01-093M24.b_43_1155

seq1  GAATTCTCTACTTTCCTCTGATCTCTGGAGCAGCCTCAGTTCCCGTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTTTCCTCTGATCTCTGGAGCAGCCTCAGTTCCCGTGCTT  50

seq1  TTCACATTTAGATGGGACACACAGTGAGCCAAGAGGGTAGTTGGAGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTTAGATGGGACACACAGTGAGCCAAGAGGGTAGTTGGAGTGAG  100

seq1  CTAACTAGTGAGAGAGGGGTGGAGCCAAGCAACAACTGGCCTCAATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGTGAGAGAGGGGTGGAGCCAAGCAACAACTGGCCTCAATCCTC  150

seq1  ACAGGAGTGGCCTTGTATTTCTCTTCACCCTGTTGCTCCTTCCTTATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTGGCCTTGTATTTCTCTTCACCCTGTTGCTCCTTCCTTATGCA  200

seq1  TACGATTATGAACAGAGATTTCGGTCCCTTGAAGTTGAAAGTTCACTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATTATGAACAGAGATTTCGGTCCCTTGAAGTTGAAAGTTCACTAGG  250

seq1  GAAAGGGCACAAGCACTCTGTCCACACTCCCATAGCCAGGTCTTCTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGCACAAGCACTCTGTCCACACTCCCATAGCCAGGTCTTCTTAAG  300

seq1  AGAGTCTCAACTGACCCAAGTTCAAGCACCATCACTCATTGTTCTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCAACTGACCCAAGTTCAAGCACCATCACTCATTGTTCTTTATG  350

seq1  CCCCATTTCATGGCCTCTCCAATTTTATTCATGTCTTATCTTTGAGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTCATGGCCTCTCCAATTTTATTCATGTCTTATCTTTGAGGCCT  400

seq1  AGATCAGGTCCAGTTGAAACCACTGGCACCTAGTTTTGATGGCCCCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGTCCAGTTGAAACCACTGGCACCTAGTTTTGATGGCCCCTTGG  450

seq1  TTCATCCTTAGAGAGCTAACCTTCTGCTCTGTAACTGGAGGAAGAAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTTAGAGAGCTAACCTTCTGCTCTGTAACTGGAGGAAGAAGCCT  500

seq1  AGAAAAGAAGGTAAGACCCTGGAGCTCTACAGGTACAAAAACAGCATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAGGTAAGACCCTGGAGCTCTACAGGTACAAAAACAGCATTAA  550

seq1  TCCTGCTCACAAAAACTCTGTTCTCTGAAGTCCCACCTCAAAAGTACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCACAAAAACTCTGTTCTCTGAAGTCCCACCTCAAAAGTACCCA  600

seq1  TGAAATTAAAGTGGCATTCAGACAAGGGCTGGGCATGTAGCTTAGTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAAGTGGCATTCAGACAAGGGCTGGGCATGTAGCTTAGTGAGT  650

seq1  AGAACGCTTGTCTGGCATGCAGTTTCACCACCAGCACCAATGAACCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGCTTGTCTGGCATGCAGTTTCACCACCAGCACCAATGAACCACTG  700

seq1  TGGTAGTGCAGTGCACACCAGTAGTCCTAGGACCAAGGAAAAGTAAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTGCAGTGCACACCAGTAGTCCTAGGACCAAGGAAAAGTAAACTG  750

seq1  GGAGGTCAGATGTTTTCTAGGTCATCCTAAGCTACATATTAAATTTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCAGATGTTTTCTAGGTCATCCTAAGCTACATATTAAATTTGAGA  800

seq1  CCCATCTGGGAAAGAAGGGAAGGGCAGAGAGAAATAATCTAATCTTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTGGGAAAGAAGGGAAGGGCAGAGAGAAATAATCTAATCTTAATA  850

seq1  ACTCTTGATAAAATAGA-TTTTTAGTAATTATATTACACTAGAAATATTA  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTCTTGATAAAATAGATTTTTTAGTAATTATATTACACTAGAAATATTA  900

seq1  GATTATTTAATTGGAAATAACTTCTTGAGAGAAGTTACCTGCCATCATCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTAATTGGAAATAACTTCTTGAGAGAAGTTACCTGCCATCATCA  950

seq1  GACATATTAAGTAAAACATGAACATTTTGTA-CCAAACAAGCACACTGCA  998
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  GACATATTAAGT-AAACATGAACATTTTGTACCCAAACAAGCACACTGCA  999

seq1  GAGAATGTGGCTCTTGTCAAGAAGGCTGTTCCTGA-CATAAACACAAATT  1047
      |||||||||||||||||||  |||||||||||||| ||||||||| ||||
seq2  GAGAATGTGGCTCTTGTCAGAAAGGCTGTTCCTGACCATAAACAC-AATT  1048

seq1  TATTTACAAATGACAAGG-CAAAAAATAAAATTAGACCATT--CGGCTTG  1094
      |||||||||||||||||| |||||||||||  |||||||||   ||||||
seq2  TATTTACAAATGACAAGGCCAAAAAATAAA--TAGACCATTTCGGGCTTG  1096

seq1  AGTTTTG-ATACAAGAA  1110
      ||||||| |||||||||
seq2  AGTTTTGAATACAAGAA  1113

seq1: chr3_32237283_32238278
seq2: B6Ng01-093M24.g_67_1077 (reverse)

seq1  GATCAAC-TCAG-ACCAGCAAAG-TCTCGT-CTCAATGTAAAG-TCTAAA  45
      ||||||| |||| |||||||||| | |||| ||| |||||||| ||||||
seq2  GATCAACTTCAGAACCAGCAAAGTTTTCGTACTCCATGTAAAGTTCTAAA  50

seq1  AGGTCAAAGCACACAGGGATTTAGCTGAACTTCAAAAGCTAAT-GCCCTC  94
      |||||||  |||||  |||||||||||||| |||||||||||| ||| ||
seq2  AGGTCAAGCCACACCAGGATTTAGCTGAACCTCAAAAGCTAATGGCCTTC  100

seq1  TGAAGGCATGTGGGATGCAGACCATCTGAC-TGAAACCAGACTCTTCC-T  142
      |||||||  ||||||||||||||||||||| ||||||||||||||||| |
seq2  TGAAGGCCAGTGGGATGCAGACCATCTGACTTGAAACCAGACTCTTCCTT  150

seq1  GAAGCC-TGGGCTCTGGGTGTTCTG-ACTGGCTTC-ATCATG-AAGCAGA  188
      |||||| |||||||||||||||||| ||||||||| |||||| |||||||
seq2  GAAGCCTTGGGCTCTGGGTGTTCTGAACTGGCTTCAATCATGAAAGCAGA  200

seq1  GA-GCCA-CCGGGCGGTGGTGGCACACGCCTTTAAT-CCCAGCACTTGGG  235
      || |||| ||||||||| |||||||||||||||||| |||||||||||||
seq2  GAGGCCACCCGGGCGGTTGTGGCACACGCCTTTAATCCCCAGCACTTGGG  250

seq1  AAGCAGAGGCAGGCGGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAAG  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGGCAGGCGGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAAG  300

seq1  TGAGTTCCAGGACAGCCAAAGCTATACAGAGAAACCCTGTCTCAAACAAA  335
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCCAGGACAGCCAAAGCTATACAGAGAAACCCTGTCTCAAACAAA  350

seq1  CAAAAAAACAAAACAAACAAACAAAAAAAAACCCAAAAAACAAACAAAAA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACAAAACAAACAAACAAAAAAAAACCCAAAAAACAAACAAAAA  400

seq1  AAGAAGCAGCAGCAGAGAGCCACAAGAACAGACTTCAATGCTACAAATAA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAGCAGCAGAGAGCCACAAGAACAGACTTCAATGCTACAAATAA  450

seq1  TTGATGACACTGAAATCTCCTTAATTTTGGACTAAGGTCTCCATTTGTCT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGACACTGAAATCTCCTTAATTTTGGACTAAGGTCTCCATTTGTCT  500

seq1  ACACTCTGTCCATCCATGACTGTAACACACCATAATATACAGGCTTCCTG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGTCCATCCATGACTGTAACACACCATAATATACAGGCTTCCTG  550

seq1  GGGGACGGGGGTCCAATCCTACAGCAAAATGAAGCCAACAGGTAGCTCGC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACGGGGGTCCAATCCTACAGCAAAATGAAGCCAACAGGTAGCTCGC  600

seq1  CTGACTGACTCTGATGCCGCCATAGCTTGATCGGACAAGGAAGGGACACT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGACTCTGATGCCGCCATAGCTTGATCGGACAAGGAAGGGACACT  650

seq1  GTCCAGACAGCATTCGCTTAGTGAGAAACTGCACCGTGCAGTTCTGATGG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGACAGCATTCGCTTAGTGAGAAACTGCACCGTGCAGTTCTGATGG  700

seq1  CCTCTGCCCTACCCACCGAATACAAGTAAAGACAACAGAGCCTCAGCCAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCCTACCCACCGAATACAAGTAAAGACAACAGAGCCTCAGCCAG  750

seq1  GGAACTTCCAAGTGCTTCGGAAACCCACAGCACCTCTATCAATGACCATA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTCCAAGTGCTTCGGAAACCCACAGCACCTCTATCAATGACCATA  800

seq1  GCAGCTACTTAAAGACTTGCAGAGTTCAGAAACAAACCGAGTTCTCACAG  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTACTTAAAGACTTGCAGAGTTCAGAAACAAACCGAGTTCTCACAG  850

seq1  GTAGCCTGGCACTGGAGTGTCATAAAACCAACGCATCACTCTCTCTAGTG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTGGCACTGGAGTGTCATAAAACCAACGCATCACTCTCTCTAGTG  900

seq1  CAAAGAAATACAGAAGTGACACTATAAATCTAACGTTTCACTCTAAAAGA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAATACAGAAGTGACACTATAAATCTAACGTTTCACTCTAAAAGA  950

seq1  AACCACGCCTACACGTCCCTAACATCCATTAAGGGCACTGGGAGACTAGA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACGCCTACACGTCCCTAACATCCATTAAGGGCACTGGGAGACTAGA  1000

seq1  AACCTGAATTC  996
      |||||||||||
seq2  AACCTGAATTC  1011