BAC Information

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BAC

Clone NameB6Ng01-093P08
Chromosome3 (Build37)
Map Location 132,786,372 - 132,921,615
singlet/doubletdoublet
Overlap gene9130221D24Rik
Upstream geneDkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12
Downstream genePpa2, E130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P08.bB6Ng01-093P08.g
ACCDH905303DH905304
length9841,096
definitionDH905303|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P08, 5' end.DH905304|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,786,372 - 132,787,126)(132,920,495 - 132,921,615)
sequence
gaattccctactacctaaataagacttaaataaagctatttataaagggc
agcatggcaaactctgtaaagattccctttataacctgtgacccctcaat
atatttattaatttttcttacaaatgtatttataaaagtatagaaaagga
gatgaagaatactcctggttttacacttttaaacacaaaatattttcagt
atctttgcctgggttagtaattatgtatatgacttattctataaaatggg
tgtgatgttgggagccgcgcccacattcgccgttacaagatggcgctgac
agctgtgttctaagtggtaaacaaataatctgcgcatatgccgagggtgg
ttctctactccatgtgctctgccttccccgtgacgtcaactcggccgatg
ggctgcagccaatcagggagtgacacgtccgaggcgaaggagaatgctcc
ttaagagggacggggtttcgttttctctctctcttgcttcttgctctctt
gcttcctgcaccctggctcctgaagatgtaagaataaagctttgccgcag
aagattctggtctgtggtgttcttcctggccggtcgtgagaacgcgtcta
ataacaattggtgccgaattccgggacgagaaaaaaactcgggactggcg
caaggaagatccctcattccagaaccagaactgcgggtcgcggtaataaa
ggttcccgtaaagcagactgttaagaaggattcaactgtatgaattcaga
acttttcagctggggaacgagagtaccagtgagtacagctttacgaggta
agtctgatcttgaactttctaacgaaattcagacagtctatcagaaagta
aagtggaatatgtttggccttgaattttttctggtgttaggagccctttt
gttccttttcacatgttatcagggattaagatagggctgaaaatctaaag
gaaattcaggacagctatcagaagtaaagtgggg
gaattccatataatcactggaacaggaaagaaaggagagccctggggctc
actgatcagactgtccagctgaatcagtgagctgcagagctggtgagatg
ccacagctaaaaaaaaaaatgtgtagagcaattgagaaaggcacctaaca
tcagcctctggccctcacacacacgtgcttacacatgtgcacatgaacct
gcacatagatgtgtacacacaggaacacacacaaacacaaacaccaaaga
aatacacagaagactataatcaaagcttgtggcatcagtgtaaaaaggac
caatgtgttcttattaaagcctgaaaagttacattttcaatggcacatgc
tatgaacacgtgttatggcatactgatgttgatccattttgttaaaacgg
tttaactaaagcacaattcttaaagaagaagacaacataaaaagaagaaa
acggagggctgaagatatggctcagcagctgaaggtgcatcctgctctct
cagaggaaagaattgagctcctagcacccactctgggacacacttcctgc
aacttcagctccaggggatccagggtcctctctggcccccaagagtacct
gcacacatgtagcatacagacacacacacacacacacacacacacacaca
cacacacggaagatcatgtaataggtaatgtatattgtacatcgcggaac
agggatgtcaaatgaggatcttggcttccctgtgatatgtgtatactggg
accaagaaactggtggttgaatgtttaattagaaataagggcaacacagc
atgaagactaacaaaagctgaaagtaggaagattacaagggaggaaatga
gataagtaataagcctaaagtaagaaagatagcaaggtgaaaatgattca
acttctcggagaagtggcttgtatattatcagtaattaaaatattaatat
ccctgacccaggtattctacatctcagagatacctaaggaaatgctgaaa
tctgaaaaatagccacgctcactcactctgtaatgtaggttaaacgaaaa
aaatcgaaatgctgcttaagatatctgaaaatgaataacatcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132786372_132787126
seq2: B6Ng01-093P08.b_47_801

seq1  GAATTCCCTACTACCTAAATAAGACTTAAATAATGCTATTTATAAAGGGC  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAATTCCCTACTACCTAAATAAGACTTAAATAAAGCTATTTATAAAGGGC  50

seq1  AGCATGGCAAACTCTGTAAAGATTCCCTTTATAACCTGTGACCCCTCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCAAACTCTGTAAAGATTCCCTTTATAACCTGTGACCCCTCAAT  100

seq1  ATATTTATTAATTTTTCTTACAAATGTATTTATAAAAGTATAGAAAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTAATTTTTCTTACAAATGTATTTATAAAAGTATAGAAAAGGA  150

seq1  GATGAAGAATACTCCTGGTTTTACACTTTTAAACACAAAATATTTTCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGAATACTCCTGGTTTTACACTTTTAAACACAAAATATTTTCAGT  200

seq1  ATCTTTGCCTGGGTTAGTAATTATGTATATGACTTATTCTATAAAATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGCCTGGGTTAGTAATTATGTATATGACTTATTCTATAAAATGGG  250

seq1  TGTGATGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGAC  300

seq1  AGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGTGG  350

seq1  TTCTCTACTCCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACTCCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATG  400

seq1  GGCTGCAGCCAATCAGGGAGTGACACGTCCGAGGCGAAGGAGAATGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGCCAATCAGGGAGTGACACGTCCGAGGCGAAGGAGAATGCTCC  450

seq1  TTAAGAGGGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTGCTCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTGCTCTCTT  500

seq1  GCTTCCTGCACCCTGGCTCCTGAAGATGTAAGAATAAAGCTTTGCCGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGCACCCTGGCTCCTGAAGATGTAAGAATAAAGCTTTGCCGCAG  550

seq1  AAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGTCGTGAGAACGCGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGTCGTGAGAACGCGTCTA  600

seq1  ATAACAATTGGTGCCGAATTCCGGGACGAGAAAAAAACTCGGGACTGGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATTGGTGCCGAATTCCGGGACGAGAAAAAAACTCGGGACTGGCG  650

seq1  CAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGTAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGTAATAAA  700

seq1  GGTTCCCGTAAAGCAGACTGTTAAGAAGGATTCAACTGTATGAATTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCGTAAAGCAGACTGTTAAGAAGGATTCAACTGTATGAATTCAGA  750

seq1  ACTTT  755
      |||||
seq2  ACTTT  755

seq1: chr3_132920495_132921615
seq2: B6Ng01-093P08.g_69_1164 (reverse)

seq1  AGCTGATGTTTTATCATTTTCAAGATTATACATTAAGGCAGCCATTTCCG  50
      |||||||||| | |||||||||     |||  |||| |||| ||||| ||
seq2  AGCTGATGTTAT-TCATTTTCA----GATATCTTAA-GCAG-CATTT-CG  42

seq1  ATTTTTTTTTCCCTTTTAAACTACA-TACAGAGTGAGTGAAGCGTGGCTA  99
      ||||||||    | ||||| ||||| ||||||||||||| ||||||||||
seq2  ATTTTTTT----CGTTTAACCTACATTACAGAGTGAGTG-AGCGTGGCTA  87

seq1  TTTTTCAGATTTCAGCATTTTTCCCTTAGGTTATCTTCTGAGATGTAGAA  149
      ||||||||||||||||||||   ||||||| |||| ||||||||||||||
seq2  TTTTTCAGATTTCAGCATTT---CCTTAGG-TATC-TCTGAGATGTAGAA  132

seq1  TAACTGGGTCAAGGGATATTAATATTTTAATTACTTGATAAATATTACAA  199
      || ||||||| ||||||||||||||||||||||| |||| |||| ||| |
seq2  TACCTGGGTC-AGGGATATTAATATTTTAATTAC-TGAT-AATA-TAC-A  177

seq1  AGCCACTTCTCCGAGAAGTTGAATCATTTTTCACCTTGCTATCTTTCTTA  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCCACTTCTCCGAGAAGTTGAATCA-TTTTCACCTTGCTATCTTTCTTA  226

seq1  CTTTAGGCTTATTACTTATCTCATTTCCTCCCTTGTAATCTTCCTACTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGCTTATTACTTATCTCATTTCCTCCCTTGTAATCTTCCTACTTT  276

seq1  CAGCTTTTTGTTAGTCTTCATGCTGTGTTGCCCTTATTTCTAATTAAACA  349
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGC-TTTTGTTAGTCTTCATGCTGTGTTGCCCTTATTTCTAATTAAACA  325

seq1  TTCAACCACCAGTTTCTTGGTCCCAGTATACACATATCACAGGGAAGCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCACCAGTTTCTTGGTCCCAGTATACACATATCACAGGGAAGCCA  375

seq1  AGATCCTCATTTGACATCCCTGTTCCTGCGATGTACAATATACATTACCT  449
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGATCCTCATTTGACATCCCTGTTCC-GCGATGTACAATATACATTACCT  424

seq1  ATTACATGATCTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGATCTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  474

seq1  TGTCTGTATGCTACATGTGTGCAGGTACTCTTGGGGGCCAGAGAGGACCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTATGCTACATGTGTGCAGGTACTCTTGGGGGCCAGAGAGGACCC  524

seq1  TGGATCCCCTGGAGCTGAAGTTGCAGGAAGTGTGTCCCAGAGTGGGTGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCCCTGGAGCTGAAGTTGCAGGAAGTGTGTCCCAGAGTGGGTGCT  574

seq1  AGGAGCTCAATTCTTTCCTCTGAGAGAGCAGGATGCACCTTCAGCTGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCAATTCTTTCCTCTGAGAGAGCAGGATGCACCTTCAGCTGCTG  624

seq1  AGCCATATCTTCAGCCCTCCGTTTTCTTCTTTTTATGTTGTCTTCTTCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATCTTCAGCCCTCCGTTTTCTTCTTTTTATGTTGTCTTCTTCTT  674

seq1  TAAGAATTGTGCTTTAGTTAAACCGTTTTAACAAAATGGATCAACATCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTGTGCTTTAGTTAAACCGTTTTAACAAAATGGATCAACATCAG  724

seq1  TATGCCATAACACGTGTTCATAGCATGTGCCATTGAAAATGTAACTTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCATAACACGTGTTCATAGCATGTGCCATTGAAAATGTAACTTTTC  774

seq1  AGGCTTTAATAAGAACACATTGGTCCTTTTTACACTGATGCCACAAGCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTAATAAGAACACATTGGTCCTTTTTACACTGATGCCACAAGCTT  824

seq1  TGATTATAGTCTTCTGTGTATTTCTTTGGTGTTTGTGTTTGTGTGTGTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATAGTCTTCTGTGTATTTCTTTGGTGTTTGTGTTTGTGTGTGTTC  874

seq1  CTGTGTGTACACATCTATGTGCAGGTTCATGTGCACATGTGTAAGCACGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTACACATCTATGTGCAGGTTCATGTGCACATGTGTAAGCACGT  924

seq1  GTGTGTGAGGGCCAGAGGCTGATGTTAGGTGCCTTTCTCAATTGCTCTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGAGGGCCAGAGGCTGATGTTAGGTGCCTTTCTCAATTGCTCTAC  974

seq1  ACATTTTTTTTTTTAGCTGTGGCATCTCACCAGCTCTGCAGCTCACTGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTTTTTTAGCTGTGGCATCTCACCAGCTCTGCAGCTCACTGAT  1024

seq1  TCAGCTGGACAGTCTGATCAGTGAGCCCCAGGGCTCTCCTTTCTTTCCTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGGACAGTCTGATCAGTGAGCCCCAGGGCTCTCCTTTCTTTCCTG  1074

seq1  TTCCAGTGATTATATGGAATTC  1121
      ||||||||||||||||||||||
seq2  TTCCAGTGATTATATGGAATTC  1096