BAC Information

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BAC

Clone NameB6Ng01-094G24
Chromosome3 (Build37)
Map Location 112,061,292 - 112,062,349
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668712, LOC625585
Downstream geneEG229746, LOC668717, Utp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G24.bB6Ng01-094G24.g
ACCDH905661DH905662
length1,0621,151
definitionDH905661|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G24, 5' end.DH905662|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtccatttagatagggagttttagagacaagtccttttactt
gctaagtcatcatgctggctatattgctaaatatttttaagtcagtgttt
ccaatgtgatttaataagtacttattttcatgtctagccttatatgagtt
ttaatgtcttatatcttttgagttgtgttttagtctatatttgaaatcct
gtttagcgaatttagacttttaatagaatagtaaattccaacaaacagaa
gtccataggattggagcagaagtaaacttgaacagttaattaatatggtt
tctaaagtgcaaaatatgacaacaatatattttattttaatgataatatg
cttatgtaacatttactaccaaagtgatatattggtttcttttactgcat
atctatctatgcatttgtttaacaaagtacaactttatcagcaaattagt
gtttatacactacacagtttcaagccagacaatgtcccacttctgagaga
tagagttggacatgagtttctactcatattaatgaaaacaaaaatttaaa
agaataacccagcttccctaagggatagaatattttatagggatacaaaa
tagatatcagtgcctgacacatgcaaaaccagtacatattcattagggca
aaataaatcaagttttatgttttcaagaatgagtgttttaaaatagccaa
taactgtgtttgtatgtatgaatttttactacattgaatcgttatgctaa
ggaaacaataacctaatattcaaccttaagtatacagaaatgaaaaaaat
ctgcaaaattgttttctgcaagcgaatatagcagtttttcactttccccc
aaggaatacatttacagatattttttttctatgctgacctctaagttatt
atgtaatgcagccaaatataacctgaacatgtcataattctatctctact
ttctgatgcattcagtttatggaacactggggatcaagctcatgggcttc
ctgcttactgggtaagacttctacatatgagtcatgtcgggttccttgga
aggttatttttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggttaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatctacacaatg
gagtacgactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgaatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatcaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcttagcaaaca
cagagtggatgctcacagtcagctaatggatggatcacagggctcccaaa
tggagggagctagagaagtacccagactaaaggatctgcaacccttataa
ggtggaatcaacatatgaacaaccagtacctggagctcctgactctagct
gcatatgtatcaaaagatggctagtcggccattattggaaacgaagcaat
ggaaccgctaaaccttaatggctcagtacagggaacgaccaggtccaaaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112061292_112062349
seq2: B6Ng01-094G24.b_50_1111 (reverse)

seq1  AAAAAATAAC--TTCAAGG-ACCCGACATGACTCATATGGTAGAAGTCTT  47
      ||||||||||  | ||||| |||||||||||||||||| |||||||||||
seq2  AAAAAATAACCTTCCAAGGAACCCGACATGACTCATAT-GTAGAAGTCTT  49

seq1  AACCAGTAAGCAGGAAG-CCATGAGCTTGATCCCCAGTGTTCCATAAACT  96
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCCAGTAAGCAGGAAGCCCATGAGCTTGATCCCCAGTGTTCCATAAACT  99

seq1  GAATGCATCAGAAAGTAGAGATAGAATTATGACATGTTCAAGGTTATATT  146
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAATGCATCAGAAAGTAGAGATAGAATTATGACATGTTC-AGGTTATATT  148

seq1  TGGCTGCATTACATAATAACTTAGAGGTCAGCATAG-AAAAAAATATCTG  195
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGCTGCATTACATAATAACTTAGAGGTCAGCATAGAAAAAAAATATCTG  198

seq1  TAAATGTATTCCTTGGGGGGAAAGTGAAAAACTGCTATATTCGCTTGCAG  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAAATGTATTCCTT-GGGGGAAAGTGAAAAACTGCTATATTCGCTTGCAG  247

seq1  -AAACAATTTTGCAGA-TTTTTTCATTTCTGTATACTTAAGGTTGAATAT  293
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAACAATTTTGCAGATTTTTTTCATTTCTGTATACTTAAGGTTGAATAT  297

seq1  TAGGTTATTGTTTCCTTAGCATAACGATTCAATGTAGTAAAAATTCATAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTATTGTTTCCTTAGCATAACGATTCAATGTAGTAAAAATTCATAC  347

seq1  ATACAAACACAGTTATTGGCTATTTTAAAACACTCATTCTTGAAAACATA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACACAGTTATTGGCTATTTTAAAACACTCATTCTTGAAAACATA  397

seq1  AAACTTGATTTATTTTGCCCTAATGAATATGTACTGGTTTTGCATGTGTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGATTTATTTTGCCCTAATGAATATGTACTGGTTTTGCATGTGTC  447

seq1  AGGCACTGATATCTATTTTGTATCCCTATAAAATATTCTATCCCTTAGGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTGATATCTATTTTGTATCCCTATAAAATATTCTATCCCTTAGGG  497

seq1  AAGCTGGGTTATTCTTTTAAATTTTTGTTTTCATTAATATGAGTAGAAAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGTTATTCTTTTAAATTTTTGTTTTCATTAATATGAGTAGAAAC  547

seq1  TCATGTCCAACTCTATCTCTCAGAAGTGGGACATTGTCTGGCTTGAAACT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCCAACTCTATCTCTCAGAAGTGGGACATTGTCTGGCTTGAAACT  597

seq1  GTGTAGTGTATAAACACTAATTTGCTGATAAAGTTGTACTTTGTTAAACA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTGTATAAACACTAATTTGCTGATAAAGTTGTACTTTGTTAAACA  647

seq1  AATGCATAGATAGATATGCAGTAAAAGAAACCAATATATCACTTTGGTAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATAGATAGATATGCAGTAAAAGAAACCAATATATCACTTTGGTAG  697

seq1  TAAATGTTACATAAGCATATTATCATTAAAATAAAATATATTGTTGTCAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTACATAAGCATATTATCATTAAAATAAAATATATTGTTGTCAT  747

seq1  ATTTTGCACTTTAGAAACCATATTAATTAACTGTTCAAGTTTACTTCTGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCACTTTAGAAACCATATTAATTAACTGTTCAAGTTTACTTCTGC  797

seq1  TCCAATCCTATGGACTTCTGTTTGTTGGAATTTACTATTCTATTAAAAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCCTATGGACTTCTGTTTGTTGGAATTTACTATTCTATTAAAAGT  847

seq1  CTAAATTCGCTAAACAGGATTTCAAATATAGACTAAAACACAACTCAAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCGCTAAACAGGATTTCAAATATAGACTAAAACACAACTCAAAA  897

seq1  GATATAAGACATTAAAACTCATATAAGGCTAGACATGAAAATAAGTACTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAGACATTAAAACTCATATAAGGCTAGACATGAAAATAAGTACTT  947

seq1  ATTAAATCACATTGGAAACACTGACTTAAAAATATTTAGCAATATAGCCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCACATTGGAAACACTGACTTAAAAATATTTAGCAATATAGCCA  997

seq1  GCATGATGACTTAGCAAGTAAAAGGACTTGTCTCTAAAACTCCCTATCTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGACTTAGCAAGTAAAAGGACTTGTCTCTAAAACTCCCTATCTA  1047

seq1  AATGGACCTGAATTC  1058
      |||||||||||||||
seq2  AATGGACCTGAATTC  1062