BAC Information

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BAC

Clone NameB6Ng01-094J23
Chromosome3 (Build37)
Map Location 75,428,765 - 75,429,865
singlet/doubletsinglet
Overlap geneSerpini1
Upstream geneLOC100041551, EG667459, BC050789, Serpini2, Wdr49, Pdcd10
Downstream geneGolph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094J23.bB6Ng01-094J23.g
ACCDH905792DH905793
length1,0781,117
definitionDH905792|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J23, 5' end.DH905793|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcattttgcatagaggtttgcttcagagagtggtattcaggatg
actagcactggtttggttgataattgacttcccaagaactgtagtgtata
agatgcaccctaccaacctggatcccttcttccctcaacccattttagta
tcagcacacacttactgtgttccagttctctctaataggtttgatcaaat
gactagacactttgcatacccatgattagaaattctctggaagataataa
ttattttctaaatctacaagctatcctaacaaacatttacggtttacacc
tctgtcatagaagaaagcaatgaaatattaccttatgaacctaaatatgt
ctaaaattataagtcacactgacctcagtgattgagttgccttagcagag
ctaacctctctgtggtaaaaggtgttatatttaggtaatatatctgcctg
aatgcttgggagacaatgaggaatcacggtaaagaaagcagaatgtaatt
atccagtgggaactcagccagtagagtaagataaatgttctaaatttaca
aggaaggcagcattaggattttatgctgtgcttcagctatgaatatgtcc
ctgactcaggtacaaagataccatgcaattgtttatatctccacaagtct
ggccctcctagctatgccaacgagatgcttacatctctaggaactgggac
atgaaccctgataacatttactaaaggaaaacagatttgtcttgtgtaga
catgtatctatactgtataaatagtaatctatacagtaggctcttagaaa
atgttgttgctcaggtttcaagcttcctgaatgagaagtagaagttacat
tgcccaattttatcggaaatatatgagctcattgtgagaaggctgagtga
tgcttaaagaaatttttgaggaaagtgtaggatttttgactctatgattc
attcatcttctctgtctctgtctctcctggtcctcctgggtttctctgtc
tgtctctccctcctctgctctagctccccttccccaacggtactatgtag
tgatcaagtggaaatatatttcgagaat
gaattctttgttcagctctgagccctattttttaatggggttatttgatt
ttctggagtccaccttcttgagatctttatatatataggatattaatccc
ctatctgatttaggataggtaaagatcctttgccaatctgttggtggcct
tttggtcttattgacggtgtcttttgcattgaagaagctttgtaatttta
tcaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtc
ctattcaggaattttcccctgtgcccatatctttgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtggagttcttgatc
cacttagatttgaccttagtacaaggagataggaatggatcaattcgctt
tcttctacatgataactgccagttttaccggcaccatttattgaaaatgc
tgtcttttccactggatggttttagctcccttgtcaaagatcaattgccc
atagttgtgtgggttcctttctgggtctttaattctattccattggtcta
cttgtctgtcgctataccagtaccatgcagtttttatcactattgctctg
tagtacagctttaggtcaggcagggtgattccaccagaggtgcttttatc
actgaggagggtttttgctatcctaggtatcttgttattacagattaatt
tgcaatttaacctttctaattcattgaagaattgagttggaattttgatg
gggattgcattgaatctgtagattgcttttggcaagacagccatttttac
tatattgatcctgccaatccatgagcatgggagagcattccatcttctga
gacctttttaaatttctttctttagagacttgaagttctatcatacagat
cttttacttccttagttagagtcatgccaaggtattttatataatggtac
tattgagaagggtgttgttcactattttctcctcagcttttttatcttgg
tgtagaacaaggccattgacttggtttagtaaatttatatatcagctact
cattggagcctgttatcagggttaaggagagcctctctgggtgaaatctt
taagggtcgcacttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75428765_75429865
seq2: B6Ng01-094J23.b_49_1126 (reverse)

seq1  ATTCTCGAAATATATTCTCCACTTTGGAATCACTTACATAGGTTACTGTT  50
      |||||||||||||||| |||||||    ||||| |||||||  ||| |||
seq2  ATTCTCGAAATATATT-TCCACTT---GATCAC-TACATAG--TACCGTT  43

seq1  TGGGGGAAGAGGGAGACAGAGAGACAAGAGAGAGGGAGAGACAGACAGAG  100
        ||||||| |||||  ||||     |||| |||||||||||||||||||
seq2  --GGGGAAG-GGGAGCTAGAG----CAGAG-GAGGGAGAGACAGACAGAG  85

seq1  AAACACAGGGAGGACCAGGAGAGACAGGAAGACAGAGAAGGATGGATGAA  150
      |||| || |||||||||||||||||||  |||||||||| |||| |||||
seq2  AAACCCA-GGAGGACCAGGAGAGACAG--AGACAGAGAA-GATGAATGAA  131

seq1  TCATAGAGTTCAAAAATCCTAACACTTTCCCTCCAAAAATTTTCTTTAAG  200
      |||||||| ||||||||||| ||||||| ||||  |||| ||||||||||
seq2  TCATAGAG-TCAAAAATCCT-ACACTTT-CCTC--AAAAATTTCTTTAAG  176

seq1  CATCACTCAGCC-TCTCACAATGAGCTCATATATTTCCGAT-ATATTTGG  248
      |||||||||||| |||||||||||||||||||||||||||| | ||| ||
seq2  CATCACTCAGCCTTCTCACAATGAGCTCATATATTTCCGATAAAATTGGG  226

seq1  CAATGTAACTTCTACTTCTCATTCAGGAAGCTTGACACCCTGAGCAACAA  298
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  CAATGTAACTTCTACTTCTCATTCAGGAAGCTTGA-AACCTGAGCAACAA  275

seq1  CATTCTCTAAGAGCCTACTGTATAGATTACTATTTATACAGTATAGATAC  348
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTAAGAGCCTACTGTATAGATTACTATTTATACAGTATAGATAC  325

seq1  ATGTCTACACAAGACAAATCTGTTTTCCTTTAGTAAATGTTATCAGGGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTACACAAGACAAATCTGTTTTCCTTTAGTAAATGTTATCAGGGTT  375

seq1  CATGTCCCAGTTCCTAGAGATGTAAGCATCTCGTTGGCATAGCTAGGAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCCAGTTCCTAGAGATGTAAGCATCTCGTTGGCATAGCTAGGAGG  425

seq1  GCCAGACTTGTGGAGATATAAACAATTGCATGGTATCTTTGTACCTGAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACTTGTGGAGATATAAACAATTGCATGGTATCTTTGTACCTGAGT  475

seq1  CAGGGACATATTCATAGCTGAAGCACAGCATAAAATCCTAATGCTGCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACATATTCATAGCTGAAGCACAGCATAAAATCCTAATGCTGCCTT  525

seq1  CCTTGTAAATTTAGAACATTTATCTTACTCTACTGGCTGAGTTCCCACTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAAATTTAGAACATTTATCTTACTCTACTGGCTGAGTTCCCACTG  575

seq1  GATAATTACATTCTGCTTTCTTTACCGTGATTCCTCATTGTCTCCCAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTACATTCTGCTTTCTTTACCGTGATTCCTCATTGTCTCCCAAGC  625

seq1  ATTCAGGCAGATATATTACCTAAATATAACACCTTTTACCACAGAGAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGCAGATATATTACCTAAATATAACACCTTTTACCACAGAGAGGT  675

seq1  TAGCTCTGCTAAGGCAACTCAATCACTGAGGTCAGTGTGACTTATAATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGCTAAGGCAACTCAATCACTGAGGTCAGTGTGACTTATAATTT  725

seq1  TAGACATATTTAGGTTCATAAGGTAATATTTCATTGCTTTCTTCTATGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATATTTAGGTTCATAAGGTAATATTTCATTGCTTTCTTCTATGAC  775

seq1  AGAGGTGTAAACCGTAAATGTTTGTTAGGATAGCTTGTAGATTTAGAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGTAAACCGTAAATGTTTGTTAGGATAGCTTGTAGATTTAGAAAA  825

seq1  TAATTATTATCTTCCAGAGAATTTCTAATCATGGGTATGCAAAGTGTCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTATCTTCCAGAGAATTTCTAATCATGGGTATGCAAAGTGTCTA  875

seq1  GTCATTTGATCAAACCTATTAGAGAGAACTGGAACACAGTAAGTGTGTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGATCAAACCTATTAGAGAGAACTGGAACACAGTAAGTGTGTGC  925

seq1  TGATACTAAAATGGGTTGAGGGAAGAAGGGATCCAGGTTGGTAGGGTGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTAAAATGGGTTGAGGGAAGAAGGGATCCAGGTTGGTAGGGTGCA  975

seq1  TCTTATACACTACAGTTCTTGGGAAGTCAATTATCAACCAAACCAGTGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATACACTACAGTTCTTGGGAAGTCAATTATCAACCAAACCAGTGCT  1025

seq1  AGTCATCCTGAATACCACTCTCTGAAGCAAACCTCTATGCAAAATGAGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCCTGAATACCACTCTCTGAAGCAAACCTCTATGCAAAATGAGAA  1075

seq1  TTC  1101
      |||
seq2  TTC  1078