BAC Information

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BAC

Clone NameB6Ng01-094L05
Chromosome3 (Build37)
Map Location 150,985,712 - 151,167,070
singlet/doubletdoublet
Overlap geneEltd1
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094L05.bB6Ng01-094L05.g
ACCDH905852DH905853
length1,2081,048
definitionDH905852|Mus musculus domesticus DNA, BAC clone: B6Ng01-094L05, 5' end.DH905853|Mus musculus domesticus DNA, BAC clone: B6Ng01-094L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,985,712 - 150,986,942)(151,166,012 - 151,167,070)
sequence
gaattctttttaaaattgagtaatcagtttgcacaaaggaaatctgtaat
ggtattggcgagattgttgaaaaacaaaaggtgtgcaggaggtggcagag
tttcatgagacacaatcttcatctccatgaccattaatttaatagcaatt
tggtcttcaatttttaaatttttgtacatttatataataaacttcagtca
ttttcacccctcttctgttccctttcattctcctccccctcacctttctt
ctcaccaagtttcttcttttctacttttgtttcaacccagtgtgtatggc
ctgttgagtttaattagtttcttggccaagggagggcaagatattgtcta
caggggcagtgactacatcactaaaagaaactgccacgcttatcaaggag
ccattaactgccaacatatcctctttgtctttaatcttcagattattctt
cggtggctttaaggaacatccacaggtatgtttcaaggtgttagttttca
catgtgctatgtaaaacatacctgtttttattcattcgttgtattctctt
tccccaagtccaattttgaaaagtctattgttgttagagctagtctaacc
ctgagtcagaagccatctctcactgaagtgcctcctgtaactgcccagtg
ttgacaaggagccagtgacacccataaccttccagattcccctggcttta
atttctaatgctctcagattgctgactttcatattgtagcctctgaagtc
actgctccgttggcctggtttctcttcaggttcctgcagaacattctttg
taggagtgtcacgcaaaagaaaaggacattaaaataaacatcccaacaac
acatcatctatgaaacccttcttttatagagtctgtcgtattttatattt
ctagaactttactgagaagtttgttgatatcttaaaatctcatatttcag
acatttcttaaaaacactaccagtgacagatcctttgcagagaacaatga
tgtttagaattggagattacctatagcttaaaaatgatcttaattcttat
ttccatatacggatacattgactgtttattttcagactgagaaataagac
cttatcctctatgataaggataaccttgaacctgttcaaggcctggttat
cagatgtcctaccctgagactgttcatgcctgtcacaataacaggcaccg
gcctggtg
gaattccatctgctctcatttctgccttatgatgtttatgcttttttgtc
atctatattttgttagtattaacgtatctttttctaagaacaaaaaactt
cctttcattcaatttctagaacaaatgtgtaagtatttatttcatgcaaa
ttactgtgttaaagttccatatatattagtataattgcaatataagtata
tatgtacatacatttgtaacacacatatacgtcatatacatgttcatgta
tatacctatacatatatatgtgtgtgtgtgtgtatatatgtatatatata
catatatatacatatatatatacatatatatacatatatatatacatata
tatacatatatatatatatacatatatatatatttgttaatatctataga
tttttccttagatttatttgtctctttattttttctgtgggagttccagc
aatcatatttttcctgagtgatacaactataaccagcaacctagattccc
gaaaagtatcagggagatgcaagttaagattttcctccatgctacatttc
aggaataagttttccaatatggacttctttaagaatcttgctcccaaatg
cctttctgatcctttcttttggagaatgccagaggttcttctaagctgga
cgttctctagtggtcttgggcatctgactattatcccactttcacaagta
tttaaaagaaagtatgtagaattccttaacagaaggctattatattttta
ttgtaaaaccatggttcagagcactgaattttgttttgtgttccttgtct
ctatcacagttctaaattcagcttacaaataatgtaaaaacccatctgtg
tctcttgatcgcctctgaaatcctaccaatggtactgtgtttctttctaa
tgaatttcagagtgaaatcacatacagacatcacctgggaggtgagatca
gttgtatatttgctctttcttttaagatttaaccttgaggataagcattt
tctcgtctgcttatgagatctgatattaccccttactgtccattctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150985712_150986942
seq2: B6Ng01-094L05.b_47_1254

seq1  GAATTCTTTTTAAAATTGAGTAATCAGTTTGCACAAAGGAAATCTGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAAAATTGAGTAATCAGTTTGCACAAAGGAAATCTGTAAT  50

seq1  GGTATTGGCGAGATTGTTGAAAAACAAAAGGTGTGCAGGAGGTGGCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGGCGAGATTGTTGAAAAACAAAAGGTGTGCAGGAGGTGGCAGAG  100

seq1  TTTCATGAGACACAATCTTCATCTCCATGACCATTAATTTAATAGCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAGACACAATCTTCATCTCCATGACCATTAATTTAATAGCAATT  150

seq1  TGGTCTTCAATTTTTAAATTTTTGTACATTTATATAATAAACTTCAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTCAATTTTTAAATTTTTGTACATTTATATAATAAACTTCAGTCA  200

seq1  TTTTCACCCCTCTTCTGTTCCCTTTCATTCTCCTCCCCCTCACCTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACCCCTCTTCTGTTCCCTTTCATTCTCCTCCCCCTCACCTTTCTT  250

seq1  CTCACCAAGTTTCTTCTTTTCTACTTTTGTTTCAACCCAGTGTGTATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAAGTTTCTTCTTTTCTACTTTTGTTTCAACCCAGTGTGTATGGC  300

seq1  CTGTTGAGTTTAATTAGTTTCTTGGCCAAGGGAGGGCAAGATATTGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGTTTAATTAGTTTCTTGGCCAAGGGAGGGCAAGATATTGTCTA  350

seq1  CAGGGGCAGTGACTACATCACTAAAAGAAACTGCCACGCTTATCAAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCAGTGACTACATCACTAAAAGAAACTGCCACGCTTATCAAGGAG  400

seq1  CCATTAACTGCCAACATATCCTCTTTGTCTTTAATCTTCAGATTATTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAACTGCCAACATATCCTCTTTGTCTTTAATCTTCAGATTATTCTT  450

seq1  CGGTGGCTTTAAGGAACATCCACAGGTATGTTTCAAGGTGTTAGTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGCTTTAAGGAACATCCACAGGTATGTTTCAAGGTGTTAGTTTTCA  500

seq1  CATGTGCTATGTAAAACATACCTGTTTTTATTCATTCGTTGTATTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCTATGTAAAACATACCTGTTTTTATTCATTCGTTGTATTCTCTT  550

seq1  TCCCCAAGTCCAATTTTGAAAAGTCTATTGTTGTTAGAGCTAGTCTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAGTCCAATTTTGAAAAGTCTATTGTTGTTAGAGCTAGTCTAACC  600

seq1  CTGAGTCAGAAGCCATCTCTCACTGAAGTGCCTCCTGTAACTGCCCAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAGAAGCCATCTCTCACTGAAGTGCCTCCTGTAACTGCCCAGTG  650

seq1  TTGACAAGGAGCCAGTGACACCCATAACCTTCCAGATTCCCCTGGCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAGGAGCCAGTGACACCCATAACCTTCCAGATTCCCCTGGCTTTA  700

seq1  ATTTCTAATGCTCTCAGATTGCTGACTTTCATATTGTAGCCTCTGAAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAATGCTCTCAGATTGCTGACTTTCATATTGTAGCCTCTGAAGTC  750

seq1  ACTGCTCCGTTGGCCTGGTTTCTCTTCAGGTTCCTGCAGAACATTCTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCCGTTGGCCTGGTTTCTCTTCAGGTTCCTGCAGAACATTCTTTG  800

seq1  TAGGAGTGTCAGGCAAAAGAAAAGGACATTAAAATAAACATCCCAACAAC  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTGTCACGCAAAAGAAAAGGACATTAAAATAAACATCCCAACAAC  850

seq1  ACATCATCTATGAAACCCTTCTTTTATAGAGTCTGTCGTATTTTATATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCTATGAAACCCTTCTTTTATAGAGTCTGTCGTATTTTATATTT  900

seq1  CTAGAACTTTACTGAGAAGTTTGTTGATATCTTAAAATCTCATATTTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACTTTACTGAGAAGTTTGTTGATATCTTAAAATCTCATATTTCAG  950

seq1  ACATTTCTTAAAAACACTACCAGTGACAGATCCTTTGCAGAGAACAATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTTAAAAACACTACCAGTGACAGATCCTTTGCAGAGAACAATGA  1000

seq1  TGTTTAGAATTGGAGATTACCTATAGCTTAAAAATGATCTTAAATTCTTA  1050
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTTTAGAATTGGAGATTACCTATAGCTTAAAAATGATCTT-AATTCTTA  1049

seq1  TTTCCATATACGGATAACATTGACTGTTTATTTTCAGACTGAGAATTAAG  1100
      ||||||||||||||| ||||||||||||||||||||||||||||| ||| 
seq2  TTTCCATATACGGAT-ACATTGACTGTTTATTTTCAGACTGAGAAATAA-  1097

seq1  GACCTTAATCCTCTAGTGAATAAGGTATAACCCTGAAACGTGTTCCAGTG  1150
      |||||| |||||||| || |||||| |||||| || ||| ||||| || |
seq2  GACCTT-ATCCTCTA-TG-ATAAGG-ATAACCTTG-AACCTGTTCAAG-G  1141

seq1  CCCTTGTTAATCAGGATGTCCTACCCTGAGGACCTGTTCAATGCCTTGTC  1200
      ||  || | |||| ||||||||||||||||   |||||| ||||| ||||
seq2  CC--TGGTTATCA-GATGTCCTACCCTGAG--ACTGTTC-ATGCC-TGTC  1184

seq1  AAACAATAGACAGGCCACCAGAAGCCTGGTG  1231
        |||||| ||||| ||||    ||||||||
seq2  --ACAATA-ACAGG-CACC---GGCCTGGTG  1208

seq1: chr3_151166012_151167070
seq2: B6Ng01-094L05.g_68_1115 (reverse)

seq1  ACAGAAATGGACAGTTGAAGGGGGTAATATCAGATCTCAATAAGGCAGAC  50
      |||| ||||||||||   | |||||||||||||||||| |||| ||||||
seq2  ACAG-AATGGACAGT---AAGGGGTAATATCAGATCTC-ATAA-GCAGAC  44

seq1  GGAGAAAATGGCTTTTCCTCAAGGTTAAATCTTAAAAGAAAGAGCAAATA  100
       |||||||| |||| |||||||||||||||||||||||||||||||||||
seq2  -GAGAAAAT-GCTTATCCTCAAGGTTAAATCTTAAAAGAAAGAGCAAATA  92

seq1  TACAAACTGATCTCACCTCCCA-GTGATGTCTGTATGTGATTTCACTTCT  149
      ||| |||||||||||||||||| ||||||||||||||||||||||| |||
seq2  TAC-AACTGATCTCACCTCCCAGGTGATGTCTGTATGTGATTTCAC-TCT  140

seq1  GAAATTCATTAGAAAAGAAACACAGTACCATTGGTAGGATTTCAGAGGCG  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATTAG-AAAGAAACACAGTACCATTGGTAGGATTTCAGAGGCG  189

seq1  ATCAAGAGACACAGATGGGTTTTTACATTATTTTGTAAGCTGAATTTAGA  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATCAAGAGACACAGATGGGTTTTTACATTA-TTTGTAAGCTGAATTTAGA  238

seq1  ACTGTGATAGAGACAAGGAACACAAAACAAAATTCAGTGCTCTGAACCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATAGAGACAAGGAACACAAAACAAAATTCAGTGCTCTGAACCAT  288

seq1  GGTTTTACAATAAAAATATAATAGCCTTCTGTTAAGGAATTCTACATACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTACAATAAAAATATAATAGCCTTCTGTTAAGGAATTCTACATACT  338

seq1  TTCTTTTAAATACTTGTGAAAGTGGGATAATAGTCAGATGCCCAAGACCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAAATACTTGTGAAAGTGGGATAATAGTCAGATGCCCAAGACCA  388

seq1  CTAGAGAACGTCCAGCTTAGAAGAACCTCTGGCATTCTCCAAAAGAAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAACGTCCAGCTTAGAAGAACCTCTGGCATTCTCCAAAAGAAAGG  438

seq1  ATCAGAAAGGCATTTGGGAGCAAGATTCTTAAAGAAGTCCATATTGGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAGGCATTTGGGAGCAAGATTCTTAAAGAAGTCCATATTGGAAA  488

seq1  ACTTATTCCTGAAATGTAGCATGGAGGAAAATCTTAACTTGCATCTCCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTCCTGAAATGTAGCATGGAGGAAAATCTTAACTTGCATCTCCCT  538

seq1  GATACTTTTCGGGAATCTAGGTTGCTGGTTATAGTTGTATCACTCAGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTTTCGGGAATCTAGGTTGCTGGTTATAGTTGTATCACTCAGGAA  588

seq1  AAATATGATTGCTGGAACTCCCACAGAAAAAATAAAGAGACAAATAAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATTGCTGGAACTCCCACAGAAAAAATAAAGAGACAAATAAATC  638

seq1  TAAGGAAAAATCTATAGATATTAACAAATATATATATATGTATATATATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAAATCTATAGATATTAACAAATATATATATATGTATATATATA  688

seq1  TATATGTATATATATGTATATATATATGTATATATATGTATATATATATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATATATATGTATATATATATGTATATATATGTATATATATATG  738

seq1  TATATATATGTATATATATACATATATACACACACACACACATATATATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATGTATATATATACATATATACACACACACACACATATATATG  788

seq1  TATAGGTATATACATGAACATGTATATGACGTATATGTGTGTTACAAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTATATACATGAACATGTATATGACGTATATGTGTGTTACAAATG  838

seq1  TATGTACATATATACTTATATTGCAATTATACTAATATATATGGAACTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACATATATACTTATATTGCAATTATACTAATATATATGGAACTTT  888

seq1  AACACAGTAATTTGCATGAAATAAATACTTACACATTTGTTCTAGAAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTAATTTGCATGAAATAAATACTTACACATTTGTTCTAGAAATT  938

seq1  GAATGAAAGGAAGTTTTTTGTTCTTAGAAAAAGATACGTTAATACTAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAGGAAGTTTTTTGTTCTTAGAAAAAGATACGTTAATACTAACA  988

seq1  AAATATAGATGACAAAAAAGCATAAACATCATAAGGCAGAAATGAGAGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGATGACAAAAAAGCATAAACATCATAAGGCAGAAATGAGAGCA  1038

seq1  GATGGAATTC  1059
      ||||||||||
seq2  GATGGAATTC  1048