BAC Information

Click to search

BAC

Clone NameB6Ng01-094L16
Chromosome3 (Build37)
Map Location 137,280,912 - 137,281,952
singlet/doubletsinglet
Overlap genenone
Upstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862
Downstream geneDdit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094L16.bB6Ng01-094L16.g
ACCDH905870DH905871
length1,1271,026
definitionDH905870|Mus musculus domesticus DNA, BAC clone: B6Ng01-094L16, 5' end.DH905871|Mus musculus domesticus DNA, BAC clone: B6Ng01-094L16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctggggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcttcagaaaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtataaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccgggggatcccgcaatacctctcctgggc
atatatccagaagatgttgcaactggtaagaaggacacatgctccactat
gttcatagaagccttattcataatagacagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaggaatgaatttatgaaattcctaggca
agatgttggacctggagggcatcatcctgattgacgtaacataatcacaa
aagaactcaaataatatgtactcactgataagtggatattaacccagaaa
cttagtatacctgagatataagatacaatttgcaaaacacatgaaactga
agaagaacgaagaccaaatgtgggccactttgccccttcttagaattggg
aacaatcacccatggaaggagttacagagacaaagtttgtagccgagaca
aaaggatgggatccatcccataatcagtctccaaacgatgacaccattgc
atacactagcaagagttgctgaaaggaccctgatatagctgtctctgtga
gactaggctgggcctagcaacacataagtggatgctcacagtcagctagt
ggatggatcacaagggctccaatggaggagctagagaagtacccagagct
aacggatctagcatcctataggtggaacagcatatgaactacagtaggca
tgagctcttactctagctgcatacatatcaaagatgactaatcgcatctt
gaaaagtggccattggacatgcgaccttaatgtcctagtaacggatgcag
tcaaaatggaagatgtcaggaagtgtg
gaattctacataggtagatagtcttacatgcccatgtagttatccatcct
tcaacagcacccctccatggaccactccagtgccctaatctagtgagtcc
tcttaggtcttaggccctttacatcctgtcccaccaaaactacacactat
tttatgacacaaatctgtgggttgctgtagaagaggattcaacctaagaa
cttacccaaagtgttgagtagatacagggttctgttgggtggtccacgtg
gcattctgcagctgtaaaacagagtgagttaaaccatggagtgactccat
gatgtacatccatctcagggagtagaagttaggtgcatgggctgtggagc
ccgcctgcctgggtttgtattccagagaaggtatttgatagcttggtaaa
tatgaataatgaactggatatttctgttggaacagtttactttttaagat
gagaattaaaataagttttccctattagagttatagggattcaggtaatg
agactataactcactgtataaattttagccatgattacagtgacaaaatt
tactgtacctttggaaaaaaaaaaccctccagtgttctggtgacattctt
atgataacattgctgggagaatgtttgtatgaactcaagagtatgtgtac
aagttttatcatttgtgcacaggaattcatttgatgatgttctgagtatt
aattacaggagacattgaaaatacaacagaatgccaggtaaatattattt
ctattccaggagaattatggttagataagcagcagatatacaaaattacc
attgcattggttcactctgttgtttctgtgaaagaatacctaaaggttgg
gtaacttatcagagcagagatttgtcttctacagtgctgaattctaggaa
atccaaagtcagtgagggccgagtctgggaaggactctcttgtgttgttc
tgtgagagcagagacagagagcattcatgaagagatgaaaggacagggat
ggaagttgaggcaaggggaagaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137280912_137281952
seq2: B6Ng01-094L16.g_67_1092 (reverse)

seq1  TCTTTCTTCCCCCCTTGCCCTCAACTTTTCCATCCCCTGTCCCTTTCATC  50
      ||||||||  ||||||| |||||||  |||||| |||||| |||||||| 
seq2  TCTTTCTT--CCCCTTG-CCTCAAC--TTCCAT-CCCTGT-CCTTTCAT-  42

seq1  CTCTCTCATGAATGCTCTTCTGTTCTTCTGCCTTCTCCACAGAACAACAC  100
      |||| |||||||||||| |||||   |||||  ||| |||||||||||||
seq2  CTCT-TCATGAATGCTC-TCTGT--CTCTGC--TCT-CACAGAACAACAC  85

seq1  AAGAGAGGTCCTTCCCAGACTCGGCCCTCACTGACTTTGGATTTCCTAGA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGA-GTCCTTCCCAGACTCGGCCCTCACTGACTTTGGATTTCCTAGA  134

seq1  ATTCAGCACTGTAGAAGACAAATCTCTGCTCTGATAAGTTACCCAACC-T  199
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTCAGCACTGTAGAAGACAAATCTCTGCTCTGATAAGTTACCCAACCTT  184

seq1  TAGGTATTCTTTCACAGAAACAACAGAGTGAACCAATGCAATGGTAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTCTTTCACAGAAACAACAGAGTGAACCAATGCAATGGTAATTT  234

seq1  TGTATATCTGCTGCTTATCTAACCATAATTCTCCTGGAATAGAAATAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCTGCTGCTTATCTAACCATAATTCTCCTGGAATAGAAATAATA  284

seq1  TTTACCTGGCATTCTGTTGTATTTTCAATGTCTCCTGTAATTAATACTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGGCATTCTGTTGTATTTTCAATGTCTCCTGTAATTAATACTCA  334

seq1  GAACATCATCAAATGAATTCCTGTGCACAAATGATAAAACTTGTACACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCATCAAATGAATTCCTGTGCACAAATGATAAAACTTGTACACAT  384

seq1  ACTCTTGAGTTCATACAAACATTCTCCCAGCAATGTTATCATAAGAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGAGTTCATACAAACATTCTCCCAGCAATGTTATCATAAGAATGT  434

seq1  CACCAGAACACTGGAGGGTTTTTTTTTTCCAAAGGTACAGTAAATTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAACACTGGAGGGTTTTTTTTTTCCAAAGGTACAGTAAATTTTGT  484

seq1  CACTGTAATCATGGCTAAAATTTATACAGTGAGTTATAGTCTCATTACCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAATCATGGCTAAAATTTATACAGTGAGTTATAGTCTCATTACCT  534

seq1  GAATCCCTATAACTCTAATAGGGAAAACTTATTTTAATTCTCATCTTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCTATAACTCTAATAGGGAAAACTTATTTTAATTCTCATCTTAAA  584

seq1  AAGTAAACTGTTCCAACAGAAATATCCAGTTCATTATTCATATTTACCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACTGTTCCAACAGAAATATCCAGTTCATTATTCATATTTACCAA  634

seq1  GCTATCAAATACCTTCTCTGGAATACAAACCCAGGCAGGCGGGCTCCACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAAATACCTTCTCTGGAATACAAACCCAGGCAGGCGGGCTCCACA  684

seq1  GCCCATGCACCTAACTTCTACTCCCTGAGATGGATGTACATCATGGAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGCACCTAACTTCTACTCCCTGAGATGGATGTACATCATGGAGTC  734

seq1  ACTCCATGGTTTAACTCACTCTGTTTTACAGCTGCAGAATGCCACGTGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGGTTTAACTCACTCTGTTTTACAGCTGCAGAATGCCACGTGGA  784

seq1  CCACCCAACAGAACCCTGTATCTACTCAACACTTTGGGTAAGTTCTTAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAACAGAACCCTGTATCTACTCAACACTTTGGGTAAGTTCTTAGG  834

seq1  TTGAATCCTCTTCTACAGCAACCCACAGATTTGTGTCATAAAATAGTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCTCTTCTACAGCAACCCACAGATTTGTGTCATAAAATAGTGTG  884

seq1  TAGTTTTGGTGGGACAGGATGTAAAGGGCCTAAGACCTAAGAGGACTCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGGTGGGACAGGATGTAAAGGGCCTAAGACCTAAGAGGACTCAC  934

seq1  TAGATTAGGGCACTGGAGTGGTCCATGGAGGGGTGCTGTTGAAGGATGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAGGGCACTGGAGTGGTCCATGGAGGGGTGCTGTTGAAGGATGGA  984

seq1  TAACTACATGGGCATGTAAGACTATCTACCTATGTAGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACATGGGCATGTAAGACTATCTACCTATGTAGAATTC  1026