BAC Information

Click to search

BAC

Clone NameB6Ng01-095P17
Chromosome3 (Build37)
Map Location 70,167,021 - 70,275,037
singlet/doubletdoublet
Overlap geneLOC100041384, LOC625868
Upstream genePpm1l, LOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik, Gm414
Downstream geneLOC670542, EG625901, EG667377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095P17.bB6Ng01-095P17.g
ACCDH906771DH906772
length1,151290
definitionDH906771|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P17, 5' end.DH906772|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,167,021 - 70,168,179)(70,274,748 - 70,275,037)
sequence
gaattcccctttgtttactgtttgtaagtgctaccagcattaaaaaaata
tattcatcccaaccacagtttttcttccctccatgtctcccagatcttac
tttttacccctcctctcatccagaaccagtccttttccctttggtcttca
aaatatagagcatgcctctatttttacaggacaaaacaagatacaataaa
agaagacaaaagattggggttgaatcaaggcaatccaataggaggaaaag
agtcccaggaataggcaaaagagtcagagacacacccactgttactctaa
ggagtcctgcaagaacaccaagcaaacaggctgacattatctttatttca
ttcatgtatacgacttctattcccgagttccgagtcataccatcagttgt
ctcccatctggagcttctacatcatcttctggctcttgttgtttcttcat
tgactatctacaattaactcttacctcaactgccaaagagaacactacaa
aatgcatatcaaaccataccatttgactactaggagttttcaaatagatt
ctgtttaggattaatgtattaacacattactggagctctgaaaaccttct
gcagtcccaaactctcaccttcctccttcccattttctattttttgtcac
tctgctatctgttatgctcctggaatgtagtaaactttcatctctaccat
tttttaaattattattattgttttgcttttttgagacagggactcctctt
tttagttgttgtttttttgttttgttttgtttttttgtttttttttgaga
ctgggtttctctgtatagccctggctgtcctggaactcactttgcagacc
aggctggcctcgaactcagaaatccacctgcctctccctcccaagtgctg
ggattaaaggcgtgcgccaccaacgcccagctaggactcctcctgtagca
ctggctatagtctggaacttgctatttagatgagctgcttcaactcatga
aatcacctgtctctgcctccaagttctagattagagcagacatgttctat
catgcttactttgttctaataaaaaaatttaataactggctctctggcat
tcagttcaccataagagtatcatatctccacaggaattttctggattttt
c
aagaggggtcaggagagacatgggaggagttggaggtggcagagggaggg
acaaaactgatgcagatacaatgcactcatgtatgaacttctaaagtttt
aaaaaattaaaacatgtcataacattcctttctcccttaacatgtaagca
tcaacaccacccaacacacacacacatcataggttctggcctcatgccca
tgtaaaaacacagattaaaacctgctatgatattttcactgagcaaactg
tgtgagtgagtgagtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_70167021_70168179
seq2: B6Ng01-095P17.b_49_1199

seq1  GAATTCCCCTTTGTTTACTGTTTGTAAGTGCTACCAGCATTAAAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTTTGTTTACTGTTTGTAAGTGCTACCAGCATTAAAAAAATA  50

seq1  TATTCATCCCAACCACAGTTTTTCTTCCCTCCATGTCTCCCAGATCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCCCAACCACAGTTTTTCTTCCCTCCATGTCTCCCAGATCTTAC  100

seq1  TTTTTACCCCTCCTCTCATCCAGAACCAGTCCTTTTCCCTTTGGTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCCCTCCTCTCATCCAGAACCAGTCCTTTTCCCTTTGGTCTTCA  150

seq1  AAATATAGAGCATGCCTCTATTTTTACAGGACAAAACAAGATACAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGAGCATGCCTCTATTTTTACAGGACAAAACAAGATACAATAAA  200

seq1  AGAAGACAAAAGATTGGGGTTGAATCAAGGCAATCCAATAGGAGGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAAAAGATTGGGGTTGAATCAAGGCAATCCAATAGGAGGAAAAG  250

seq1  AGTCCCAGGAATAGGCAAAAGAGTCAGAGACACACCCACTGTTACTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGGAATAGGCAAAAGAGTCAGAGACACACCCACTGTTACTCTAA  300

seq1  GGAGTCCTGCAAGAACACCAAGCAAACAGGCTGACATTATCTTTATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTGCAAGAACACCAAGCAAACAGGCTGACATTATCTTTATTTCA  350

seq1  TTCATGTATACGACTTCTATTCCCGAGTTCCGAGTCATACCATCAGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTATACGACTTCTATTCCCGAGTTCCGAGTCATACCATCAGTTGT  400

seq1  CTCCCATCTGGAGCTTCTACATCATCTTCTGGCTCTTGTTGTTTCTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATCTGGAGCTTCTACATCATCTTCTGGCTCTTGTTGTTTCTTCAT  450

seq1  TGACTATCTACAATTAACTCTTACCTCAACTGCCAAAGAGAACACTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATCTACAATTAACTCTTACCTCAACTGCCAAAGAGAACACTACAA  500

seq1  AATGCATATCAAACCATACCATTTGACTACTAGGAGTTTTCAAATAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATATCAAACCATACCATTTGACTACTAGGAGTTTTCAAATAGATT  550

seq1  CTGTTTAGGATTAATGTATTAACACATTACTGGAGCTCTGAAAACCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAGGATTAATGTATTAACACATTACTGGAGCTCTGAAAACCTTCT  600

seq1  GCAGTCCCAAACTCTCACCTTCCTCCTTCCCATTTTCTATTTTTTGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCCAAACTCTCACCTTCCTCCTTCCCATTTTCTATTTTTTGTCAC  650

seq1  TCTGCTATCTGTTATGCTCCTGGAATGTAGTAAACTTTCATCTCTACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATCTGTTATGCTCCTGGAATGTAGTAAACTTTCATCTCTACCAT  700

seq1  TTTTTAAATTATTATTATTGTTTTGCTTTTTTGAGACAGGGACTCCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATTATTATTATTGTTTTGCTTTTTTGAGACAGGGACTCCTCTT  750

seq1  TTTAGTTGTTGTTTTTTTGTTTTGTTTTGTTTTTTTGTTTTTTTTTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTTGTTTTTTTGTTTTGTTTTGTTTTTTTGTTTTTTTTTGAGA  800

seq1  CTGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGCAGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGCAGACC  850

seq1  AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCCCAAGTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTCCCTCCCAAGTGCTG  900

seq1  GGATTAAAGGCGTGCGCCACCAACGCCCAGCTAGGGACTCCTCCTGTAGC  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGATTAAAGGCGTGCGCCACCAACGCCCAGCTA-GGACTCCTCCTGTAGC  949

seq1  ACTGGCTATAGTCTGGAACTTGCTATTTAGATGAGGCTTGCTTCAAACTC  1000
      |||||||||||||||||||||||||||||||||||   |||||| |||||
seq2  ACTGGCTATAGTCTGGAACTTGCTATTTAGATGAG--CTGCTTC-AACTC  996

seq1  ATGAAAATCAACCTGTCTCTGCCTCCAAAGTTCTAGGATTAGAGGCAGAC  1050
      ||| ||||| |||||||||||||||| |||||||| ||||||| ||||||
seq2  ATG-AAATC-ACCTGTCTCTGCCTCC-AAGTTCTA-GATTAGA-GCAGAC  1041

seq1  ATGTTCTATCATGCTTACTTTGTTTCTACATTAAAAAAAATTTAATAACT  1100
      |||||||||||||||||||||| ||||| ||  |||||||||||||||||
seq2  ATGTTCTATCATGCTTACTTTG-TTCTA-AT--AAAAAAATTTAATAACT  1087

seq1  GGCTTCTTCTGGGCATTCAGGTCTCAGCATAAGAGTTATCATATCTACA-  1149
      ||||   ||| |||||||||   ||| |||||||| |||||||||| || 
seq2  GGCT--CTCT-GGCATTCAG--TTCACCATAAGAG-TATCATATCTCCAC  1131

seq1  AGGATTTTTC----------  1159
      |||| |||||          
seq2  AGGAATTTTCTGGATTTTTC  1151

seq1: chr3_70274748_70275037
seq2: B6Ng01-095P17.g_75_364 (reverse)

seq1  CACACACACACACACACACACACACACTCACTCACTCACACAGTTTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACTCACTCACTCACACAGTTTGCTC  50

seq1  AGTGAAAATATCATAGCAGGTTTTAATCTGTGTTTTTACATGGGCATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAATATCATAGCAGGTTTTAATCTGTGTTTTTACATGGGCATGAG  100

seq1  GCCAGAACCTATGATGTGTGTGTGTGTTGGGTGGTGTTGATGCTTACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACCTATGATGTGTGTGTGTGTTGGGTGGTGTTGATGCTTACATG  150

seq1  TTAAGGGAGAAAGGAATGTTATGACATGTTTTAATTTTTTAAAACTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGAGAAAGGAATGTTATGACATGTTTTAATTTTTTAAAACTTTAG  200

seq1  AAGTTCATACATGAGTGCATTGTATCTGCATCAGTTTTGTCCCTCCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATACATGAGTGCATTGTATCTGCATCAGTTTTGTCCCTCCCTCT  250

seq1  GCCACCTCCAACTCCTCCCATGTCTCTCCTGACCCCTCTT  290
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCCAACTCCTCCCATGTCTCTCCTGACCCCTCTT  290