BAC Information

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BAC

Clone NameB6Ng01-096E19
Chromosome3 (Build37)
Map Location 137,601,662 - 137,742,285
singlet/doubletdoublet
Overlap geneDapp1, EG329763, LOC100039528
Upstream geneLOC668870, LOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1
Downstream geneMttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096E19.bB6Ng01-096E19.g
ACCDH906997DH906998
length1,106385
definitionDH906997|Mus musculus domesticus DNA, BAC clone: B6Ng01-096E19, 5' end.DH906998|Mus musculus domesticus DNA, BAC clone: B6Ng01-096E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,741,163 - 137,742,285)(137,601,662 - 137,602,052)
sequence
gaattctctttctctgtcactgaaggtagtagacctcaggtggtgaccca
tgtgggaaaggaccaatagctgtcatgaatggcatgagcatcagtttata
agtacactttaaccacttggacatttaccacatccctggcaggccgagtg
aggtttcaggctttcacacagaagcaacaaataaaaagttctttccctac
ccccacccaagtttctctcctactgtgggagaatggaaggctcagatctg
ctggtggaaaatactgatagtagcccataatacattttcttcctaccttt
gtggggagctggctaacaaatctatggggctgtcccagaagtctgctgaa
acttacatggccttctgggcacagcctctctccactcagaccctgtatac
tctctccattccattcaaatccttgacattccacacctgctgctctcaga
tatacgggtttgagatcttggaaagaaatggattctagcttcttgttcca
atagtaagtgacccttatatgcagtcagtttgactgaaaaaaaaaatgtt
caaattctggggtagcaatggcttcttaaatatggcccaaaggcatcttc
tgacccagagaccatgtttcatatcatatacctcagagacaagggtttat
ttcacagctcattgtccggtaaccaagtggactgtggtcaaagaccactc
actactcctgcttcaaatcttgctctttgtctaaaagaacttaattttta
gaacttgtttctccccctttagaaaggccctggaagtggtattgaatttg
gtttgagcctggatttaaaaaaaaacaaacccaacagtgacaaagtatta
aaatgttaaaagctttagaaaattcatattctgagaggcataaaatccct
gacttcaggagcattttaagtggaaagcaatactggtgattgtcaaataa
aagggtcatctaaagaattttccagatacttatctttaacaaacaagaga
ctgaacagagattccttacagaaatcttgagcgttaatactggcttttaa
ccggggtattgggtagaaagtattaagaaatcttcagtgtacactcatcg
agagac
ctttgtcccaagcagagggagccaaatactgcggagagcgacagctgcac
tgaccaatcagcagcctctggagggagccctcattttagcagagtcagaa
tagatcaggatcaagagccccgatcctgggctggcaacatggctcagtgg
gtaaagatgtttgtggtcaaatcaagcctgataatccgagtttgattccc
atgaactgcttattgaaaggagagatgcaactccataggttgtctctgat
ctccgaacaaactctgtggccagtgtgccccgccccctcataattgggtc
tctagactcttgtttcagaggatgtctagaacctcacggaaccaacacct
aagcagcggcgggagtggggatggggtgagggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137741163_137742285
seq2: B6Ng01-096E19.b_44_1149 (reverse)

seq1  GTCTCTCAATTAAGTGATACACTGAAGAATTTCTTAATTACTTTCTAACC  50
      ||||||| | | |||| |||||||||| ||||||||| |||||||| |||
seq2  GTCTCTCGA-TGAGTG-TACACTGAAG-ATTTCTTAA-TACTTTCT-ACC  45

seq1  AAATACCCCGTTTAAAAGGCAAGTATTAACGCTCAAGATTTCTGTAAGGA  100
       ||||||||| |||||| || |||||||||||||||||||||||||||||
seq2  CAATACCCCGGTTAAAA-GCCAGTATTAACGCTCAAGATTTCTGTAAGGA  94

seq1  ATCTCTGTTCAGTCTCTTGTTTGTTTAAAGATAAAGTATTCTGGAAAATT  150
      ||||||||||||||||||||||| |||||||| ||||| |||||||||||
seq2  ATCTCTGTTCAGTCTCTTGTTTG-TTAAAGAT-AAGTA-TCTGGAAAATT  141

seq1  CTTTAGATGACCCTTTTTATTTTGACAATCACCAGTATTTGCTTTCCACT  200
      |||||||||||||||||   ||||||||||||||||| ||||||||||||
seq2  CTTTAGATGACCCTTTT--ATTTGACAATCACCAGTA-TTGCTTTCCACT  188

seq1  TAAAATTGCTTCTTGAAGTCAGGGATTTTATGCCTCTCAGAATACTGAAT  250
      ||||| ||| || ||||||||||||||||||||||||||||||| |||||
seq2  TAAAA-TGC-TCCTGAAGTCAGGGATTTTATGCCTCTCAGAATA-TGAAT  235

seq1  TTTCTAAAGCTTTTAACATTTTAATACTTTGTCACTGTTGGGTTTGTTTT  300
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCTAAAGCTTTTAACATTTTAATACTTTGTCACTGTTGGGTTTG-TTT  284

seq1  TTTTTTAAATCCAGGCTCAAAACCAAATTCAATACCACTTCCAGGGCCTT  350
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTTTAAATCCAGGCTC-AAACCAAATTCAATACCACTTCCAGGGCCTT  333

seq1  TCTTAAGGGGGAGAAACAAGTTCTAAAAATTAAGTTCTTTTAGACAAAGA  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGGGGAGAAACAAGTTCTAAAAATTAAGTTCTTTTAGACAAAGA  383

seq1  GCAAGATTTGAAGCAGGAGTAGTGAGTGGTCTTTGACCACAGTCCACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATTTGAAGCAGGAGTAGTGAGTGGTCTTTGACCACAGTCCACTTG  433

seq1  GTTACCGGACAATGAGCTGTGAAATAAACCCTTGTCTCTGAGGTATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCGGACAATGAGCTGTGAAATAAACCCTTGTCTCTGAGGTATATGA  483

seq1  TATGAAACATGGTCTCTGGGTCAGAAGATGCCTTTGGGCCATATTTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAACATGGTCTCTGGGTCAGAAGATGCCTTTGGGCCATATTTAAGA  533

seq1  AGCCATTGCTACCCCAGAATTTGAACATTTTTTTTTTCAGTCAAACTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGCTACCCCAGAATTTGAACATTTTTTTTTTCAGTCAAACTGAC  583

seq1  TGCATATAAGGGTCACTTACTATTGGAACAAGAAGCTAGAATCCATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATAAGGGTCACTTACTATTGGAACAAGAAGCTAGAATCCATTTCT  633

seq1  TTCCAAGATCTCAAACCCGTATATCTGAGAGCAGCAGGTGTGGAATGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGATCTCAAACCCGTATATCTGAGAGCAGCAGGTGTGGAATGTCA  683

seq1  AGGATTTGAATGGAATGGAGAGAGTATACAGGGTCTGAGTGGAGAGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGAATGGAATGGAGAGAGTATACAGGGTCTGAGTGGAGAGAGGC  733

seq1  TGTGCCCAGAAGGCCATGTAAGTTTCAGCAGACTTCTGGGACAGCCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCAGAAGGCCATGTAAGTTTCAGCAGACTTCTGGGACAGCCCCAT  783

seq1  AGATTTGTTAGCCAGCTCCCCACAAAGGTAGGAAGAAAATGTATTATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTTAGCCAGCTCCCCACAAAGGTAGGAAGAAAATGTATTATGGG  833

seq1  CTACTATCAGTATTTTCCACCAGCAGATCTGAGCCTTCCATTCTCCCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATCAGTATTTTCCACCAGCAGATCTGAGCCTTCCATTCTCCCACA  883

seq1  GTAGGAGAGAAACTTGGGTGGGGGTAGGGAAAGAACTTTTTATTTGTTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGAGAAACTTGGGTGGGGGTAGGGAAAGAACTTTTTATTTGTTGC  933

seq1  TTCTGTGTGAAAGCCTGAAACCTCACTCGGCCTGCCAGGGATGTGGTAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTGAAAGCCTGAAACCTCACTCGGCCTGCCAGGGATGTGGTAAA  983

seq1  TGTCCAAGTGGTTAAAGTGTACTTATAAACTGATGCTCATGCCATTCATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAGTGGTTAAAGTGTACTTATAAACTGATGCTCATGCCATTCATG  1033

seq1  ACAGCTATTGGTCCTTTCCCACATGGGTCACCACCTGAGGTCTACTACCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATTGGTCCTTTCCCACATGGGTCACCACCTGAGGTCTACTACCT  1083

seq1  TCAGTGACAGAGAAAGAGAATTC  1123
      |||||||||||||||||||||||
seq2  TCAGTGACAGAGAAAGAGAATTC  1106

seq1: chr3_137601662_137602052
seq2: B6Ng01-096E19.g_67_457

seq1  GAATTCCTTTGTCCCAAGCAGAGGGAGCCAAATACTGCGGAGAGCGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGTCCCAAGCAGAGGGAGCCAAATACTGCGGAGAGCGACAG  50

seq1  CTGCACTGACCAATCAGCAGCCTCTGGAGGGAGCCCTCATTTTAGCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGACCAATCAGCAGCCTCTGGAGGGAGCCCTCATTTTAGCAGAG  100

seq1  TCAGAATAGATCAGGATCAAGAGCCCCGATCCTGGGCTGGCAACATGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATAGATCAGGATCAAGAGCCCCGATCCTGGGCTGGCAACATGGCT  150

seq1  CAGTGGGTAAAGATGTTTGTGGTCAAATCAAGCCTGATAATCCGAGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTAAAGATGTTTGTGGTCAAATCAAGCCTGATAATCCGAGTTTG  200

seq1  ATTCCCATGAACTGCTTATTGAAAGGAGAGATGCAACTCCATAGGTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATGAACTGCTTATTGAAAGGAGAGATGCAACTCCATAGGTTGTC  250

seq1  TCTGATCTCCGAACAAACTCTGTGGCCAGTGTGCCCCGCCCCCTCATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTCCGAACAAACTCTGTGGCCAGTGTGCCCCGCCCCCTCATAAT  300

seq1  TGGGTCTCTAGACTCTTGTTTCAGAGGATGTCTAGAACCTCACGGAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTCTAGACTCTTGTTTCAGAGGATGTCTAGAACCTCACGGAACCA  350

seq1  ACACCTAAGCAGCGGCGGGAGTGGGGATGGGGTGAGGGTGA  391
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAAGCAGCGGCGGGAGTGGGGATGGGGTGAGGGTGA  391