BAC Information

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BAC

Clone NameB6Ng01-096G16
Chromosome3 (Build37)
Map Location 64,453,575 - 64,637,349
singlet/doubletdoublet
Overlap gene4930518C23Rik, 4933425M15Rik
Upstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918
Downstream geneLOC670110, Kcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096G16.bB6Ng01-096G16.g
ACCDH907073DH907074
length3881,053
definitionDH907073|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G16, 5' end.DH907074|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,453,575 - 64,453,968)(64,636,285 - 64,637,349)
sequence
aggtttgattccaaatgcccaaggtggtgcttcccaaccatctacaagta
tcgtccaggggatctgagctccctctttagatcactgttggtatattcat
acttacggtgcacaaaaatgcacaaaaggaatcattaacgaatattaagt
aagataaaatcaaaagaaaataaaactttaaaagaaagtatcaaggataa
gaagacactaaaaaaatagtaaataaaacatgttgtcagaatatatggta
aggtggcaggctaacagaatgaggaatgttacctgcattactaagaagag
ccagcactgagtgttgtgtgggtcaataccttggtcttgcaaactttata
tgccccaatacaggggaacaccagggccaagaagtggg
gaattctatgacctatggtggtactacaaaactattaagctgacaaaaag
aaaatgtgggtgtattataactgggtggcatcaagcctgagccgtcattc
tgtccttatcccaaacctttctaagagcctgttcttcaaatcctcccttc
tttcctcagttccccaaaccttctgattgtctaccatgccactgtctgtc
ctctactactgctatttagtgctctaatgctgtactaatcactgctctca
ctctgttaaaaaaaaaacaaaaacaaaaccaagcaaacgaacaaacaagc
aaaaaaaaaccttgagatgaatatcttaagaggaggagagtttaggactc
acactttctgagggttcaattcatggctaacttgccccaatgtttctgtg
tctatgattaaagagatcacgctgagttatctgctcatctcacatctgcc
agtgggcaatggaacagagagatgtatccacctttcatggcatgatgtag
ggtgttgtaggtaggtttccaaggtatctgggaaagtagaagtgacagta
atgaggtaagctaaagactgatagctgtagaaacagactagattggggag
aaagaacattgaaaggcaatcattagtcctaaaaatggcaagtagaaaaa
aatcaactagaaaaataaatcagtccctgaataaggccttggtgaaataa
aatgattcgacaattaccttaggcatttttaggctcataatatattgttt
ttgttacagtctgcctccttctgttctattgcttagactcaaaatttatg
gttgctcatcagtttgcagtagttgacagaggaaaacatgaatgaatttt
ccaaatgatcatgttttctgtgtcattgattcagcttatggttcatcctt
gtctgtgactcaatgtgataaatgagcatatgttgactaggaaatatgca
tgatgctttataaagctgtgtgtgtcagcctacatatgtattcaagatat
ccttccacatgagagcttcaacagaatccccatcaacaatattttcttgc
tat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64453575_64453968
seq2: B6Ng01-096G16.b_43_436

seq1  GAATTCAGGTTTGATTCCAAATGCCCAAGGTGGTGCTTCCCAACCATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTTGATTCCAAATGCCCAAGGTGGTGCTTCCCAACCATCTA  50

seq1  CAAGTATCGTCCAGGGGATCTGAGCTCCCTCTTTAGATCACTGTTGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATCGTCCAGGGGATCTGAGCTCCCTCTTTAGATCACTGTTGGTAT  100

seq1  ATTCATACTTACGGTGCACAAAAATGCACAAAAGGAATCATTAACGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATACTTACGGTGCACAAAAATGCACAAAAGGAATCATTAACGAATA  150

seq1  TTAAGTAAGATAAAATCAAAAGAAAATAAAACTTTAAAAGAAAGTATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAAGATAAAATCAAAAGAAAATAAAACTTTAAAAGAAAGTATCAA  200

seq1  GGATAAGAAGACACTAAAAAAATAGTAAATAAAACATGTTGTCAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGAAGACACTAAAAAAATAGTAAATAAAACATGTTGTCAGAATAT  250

seq1  ATGGTAAGGTGGCAGGCTAACAGAATGAGGAATGTTACCTGCATTACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAGGTGGCAGGCTAACAGAATGAGGAATGTTACCTGCATTACTAA  300

seq1  GAAGAGCCAGCACTGAGTGTTGTGTGGGTCAATACCTTGGTCTTGCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCCAGCACTGAGTGTTGTGTGGGTCAATACCTTGGTCTTGCAAAC  350

seq1  TTTATATGCCCCAATACAGGGGAACACCAGGGCCAAGAAGTGGG  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGCCCCAATACAGGGGAACACCAGGGCCAAGAAGTGGG  394

seq1: chr3_64636285_64637349
seq2: B6Ng01-096G16.g_67_1119 (reverse)

seq1  ATAGCAAGAAAATATTTGTTGAT-GTGATTCTGTTGAAGCTCTTCATGTG  49
      |||||||||||||| |||||||| | |||||||||||||||| |||||||
seq2  ATAGCAAGAAAATA-TTGTTGATGGGGATTCTGTTGAAGCTC-TCATGTG  48

seq1  GAAGGAATTATCTTGAAATACATATGTAGGCTGACACAACAACAGCTTTA  99
      ||||||  ||||||| ||||||||||||||||||||||   |||||||||
seq2  GAAGGA--TATCTTG-AATACATATGTAGGCTGACACA--CACAGCTTTA  93

seq1  TAAAGCATTCATGCATAATTTCCTAGTTCAACATATTGCTCATTTATCAC  149
      ||||||| |||||||| ||||||||| |||||||| ||||||||||||||
seq2  TAAAGCA-TCATGCAT-ATTTCCTAG-TCAACATA-TGCTCATTTATCAC  139

seq1  AATTGAGTTCACAGACAAGGATGAACCATAAGCTGAATCAATGACACAGA  199
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  -ATTGAG-TCACAGACAAGGATGAACCATAAGCTGAATCAATGACACAGA  187

seq1  AAACATGATCATTTGGAAAATTCATTCATGTTTTCCTCTGTCAACTACTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGATCATTTGGAAAATTCATTCATGTTTTCCTCTGTCAACTACTG  237

seq1  CAAACTGATGAGCAACCATAAATTTTGAGTCTAAGCAATAGAACAGAAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGATGAGCAACCATAAATTTTGAGTCTAAGCAATAGAACAGAAGG  287

seq1  AGGCAGACTGTAACAAAAACAATATATTATGAGCCTAAAAATGCCTAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACTGTAACAAAAACAATATATTATGAGCCTAAAAATGCCTAAGG  337

seq1  TAATTGTCGAATCATTTTATTTCACCAAGGCCTTATTCAGGGACTGATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTCGAATCATTTTATTTCACCAAGGCCTTATTCAGGGACTGATTT  387

seq1  ATTTTTCTAGTTGATTTTTTTCTACTTGCCATTTTTAGGACTAATGATTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTAGTTGATTTTTTTCTACTTGCCATTTTTAGGACTAATGATTG  437

seq1  CCTTTCAATGTTCTTTCTCCCCAATCTAGTCTGTTTCTACAGCTATCAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAATGTTCTTTCTCCCCAATCTAGTCTGTTTCTACAGCTATCAGT  487

seq1  CTTTAGCTTACCTCATTACTGTCACTTCTACTTTCCCAGATACCTTGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTTACCTCATTACTGTCACTTCTACTTTCCCAGATACCTTGGAA  537

seq1  ACCTACCTACAACACCCTACATCATGCCATGAAAGGTGGATACATCTCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCTACAACACCCTACATCATGCCATGAAAGGTGGATACATCTCTC  587

seq1  TGTTCCATTGCCCACTGGCAGATGTGAGATGAGCAGATAACTCAGCGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATTGCCCACTGGCAGATGTGAGATGAGCAGATAACTCAGCGTGA  637

seq1  TCTCTTTAATCATAGACACAGAAACATTGGGGCAAGTTAGCCATGAATTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAATCATAGACACAGAAACATTGGGGCAAGTTAGCCATGAATTG  687

seq1  AACCCTCAGAAAGTGTGAGTCCTAAACTCTCCTCCTCTTAAGATATTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCAGAAAGTGTGAGTCCTAAACTCTCCTCCTCTTAAGATATTCAT  737

seq1  CTCAAGGTTTTTTTTTGCTTGTTTGTTCGTTTGCTTGGTTTTGTTTTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGTTTTTTTTTGCTTGTTTGTTCGTTTGCTTGGTTTTGTTTTTGT  787

seq1  TTTTTTTTTAACAGAGTGAGAGCAGTGATTAGTACAGCATTAGAGCACTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAACAGAGTGAGAGCAGTGATTAGTACAGCATTAGAGCACTA  837

seq1  AATAGCAGTAGTAGAGGACAGACAGTGGCATGGTAGACAATCAGAAGGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAGTAGTAGAGGACAGACAGTGGCATGGTAGACAATCAGAAGGTT  887

seq1  TGGGGAACTGAGGAAAGAAGGGAGGATTTGAAGAACAGGCTCTTAGAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAACTGAGGAAAGAAGGGAGGATTTGAAGAACAGGCTCTTAGAAAG  937

seq1  GTTTGGGATAAGGACAGAATGACGGCTCAGGCTTGATGCCACCCAGTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGATAAGGACAGAATGACGGCTCAGGCTTGATGCCACCCAGTTAT  987

seq1  AATACACCCACATTTTCTTTTTGTCAGCTTAATAGTTTTGTAGTACCACC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACCCACATTTTCTTTTTGTCAGCTTAATAGTTTTGTAGTACCACC  1037

seq1  ATAGGTCATAGAATTC  1065
      ||||||||||||||||
seq2  ATAGGTCATAGAATTC  1053