BAC Information

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BAC

Clone NameB6Ng01-096K03
Chromosome3 (Build37)
Map Location 115,429,143 - 115,429,893
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfm3, EG546808, Edg1
Downstream geneDph5, LOC626061, Slc30a7, Extl2, Vcam1, Gpr88, Cdc14a, Rtcd1, Dbt, LOC100043702, LOC100043705, Lrrc39, A930028L21Rik, Sass6, Hiat1, Slc35a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096K03.bB6Ng01-096K03.g
ACCDH907230DH907231
length1,207751
definitionDH907230|Mus musculus domesticus DNA, BAC clone: B6Ng01-096K03, 5' end.DH907231|Mus musculus domesticus DNA, BAC clone: B6Ng01-096K03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccctctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatatttaaattatt
tgtggctattgaggagggtgtgtttccctaaattcttctcagcctgttta
ttctttggtgtagaggaaaggcattgacttgtttgagtaaatttatatct
agctactccaccgaagctgttttcagttagagtttcctgttggaatttag
gtcacttaaatatcattatttcatctgcaaaggaaattgacttcttcatt
gtaaccctgattccttgtgccaatgctcggcatactcagaactatttgaa
atgtgat
gaattctttgtcagaatgtccttctaggccattcgttctggggaccatta
ctatgggttagtaatttttggaggagatatgttgccttggttttctgtgt
tgtttttgtttttgtgctatggcctgtgtatctggaattaggtaagtctt
tctttacttctttctttctttctttctttctttctttctttctttctttc
ttccttccttccttccttccttcctttcttcctttcttcctttcttttcc
agttatttttcttctttcaatagagacatttacaatgttcaggaaggtat
tgtattcctgatgggactaagtcataataggtttgagatgtcattttctt
ctgtaagagctgttattgagttctacagtatctattcaaaatttggctct
gaaagtcagctatagtctgtttaatggctatggcttcttggatcaagagc
tgaactgcagttcccaaggcaacttacaccgttctatctggaggaagtaa
agtctttcacctggtctgagaggtttgtcaggcaccttgaaagagttcat
ctaaggtggcactgatgcatctaaatagaagccaagtccttacttgatgc
ttgagatgtgaagcaggcagtgtacctgcgaggggtggctttgtgggctg
agcccaaacaggcaaagccagcaggtctcttacttgttgtatgaggccct
gcaagcaggcaactagcagatgattggtgtgtggatgcgggtgggtgtgt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_115429143_115429893
seq2: B6Ng01-096K03.g_66_816

seq1  GAATTCTTTGTCAGAATGTCCTTCTAGGCCATTCGTTCTGGGGACCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCAGAATGTCCTTCTAGGCCATTCGTTCTGGGGACCATTA  50

seq1  CTATGGGTTAGTAATTTTTGGAGGAGATATGTTGCCTTGGTTTTCTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGTTAGTAATTTTTGGAGGAGATATGTTGCCTTGGTTTTCTGTGT  100

seq1  TGTTTTTGTTTTTGTGCTATGGCCTGTGTATCTGGAATTAGGTAAGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGTTTTTGTGCTATGGCCTGTGTATCTGGAATTAGGTAAGTCTT  150

seq1  TCTTTACTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  200

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTTCTTCCTTTCTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTTCTTCCTTTCTTTTCC  250

seq1  AGTTATTTTTCTTCTTTCAATAGAGACATTTACAATGTTCAGGAAGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTTTCTTCTTTCAATAGAGACATTTACAATGTTCAGGAAGGTAT  300

seq1  TGTATTCCTGATGGGACTAAGTCATAATAGGTTTGAGATGTCATTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCTGATGGGACTAAGTCATAATAGGTTTGAGATGTCATTTTCTT  350

seq1  CTGTAAGAGCTGTTATTGAGTTCTACAGTATCTATTCAAAATTTGGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGAGCTGTTATTGAGTTCTACAGTATCTATTCAAAATTTGGCTCT  400

seq1  GAAAGTCAGCTATAGTCTGTTTAATGGCTATGGCTTCTTGGATCAAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCAGCTATAGTCTGTTTAATGGCTATGGCTTCTTGGATCAAGAGC  450

seq1  TGAACTGCAGTTCCCAAGGCAACTTACACCGTTCTATCTGGAGGAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGCAGTTCCCAAGGCAACTTACACCGTTCTATCTGGAGGAAGTAA  500

seq1  AGTCTTTCACCTGGTCTGAGAGGTTTGTCAGGCACCTTGAAAGAGTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCACCTGGTCTGAGAGGTTTGTCAGGCACCTTGAAAGAGTTCAT  550

seq1  CTAAGGTGGCACTGATGCATCTAAATAGAAGCCAAGTCCTTACTTGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTGGCACTGATGCATCTAAATAGAAGCCAAGTCCTTACTTGATGC  600

seq1  TTGAGATGTGAAGCAGGCAGTGTACCTGCGAGGGGTGGCTTTGTGGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATGTGAAGCAGGCAGTGTACCTGCGAGGGGTGGCTTTGTGGGCTG  650

seq1  AGCCCAAACAGGCAAAGCCAGCAGGTCTCTTACTTGTTGTATGAGGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAACAGGCAAAGCCAGCAGGTCTCTTACTTGTTGTATGAGGCCCT  700

seq1  GCAAGCAGGCAACTAGCAGATGATTGGTGTGTGGATGCGGGTGGGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGGCAACTAGCAGATGATTGGTGTGTGGATGCGGGTGGGTGTGT  750

seq1  G  751
      |
seq2  G  751