BAC Information

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BAC

Clone NameB6Ng01-097I06
Chromosome3 (Build37)
Map Location 98,493,566 - 98,494,305
singlet/doubletsinglet
Overlap genenone
Upstream genePde4dip, Sec22b, EG433632, LOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh, Zfp697, LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5, LOC668543
Downstream geneHsd3b2, Hsd3b3, Hsd3b6, LOC545556, Hsd3b1, Hao3, LOC668557, Wars2, Tbx15, M6pr-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097I06.bB6Ng01-097I06.g
ACCDH907875DH907876
length1,282892
definitionDH907875|Mus musculus domesticus DNA, BAC clone: B6Ng01-097I06, 5' end.DH907876|Mus musculus domesticus DNA, BAC clone: B6Ng01-097I06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggattgcaaactttaaaaagactaaatgaacttattagaccta
agagatttgtagcagctttgattttaggaattactgccttaattgcaatt
ttaacttcctttacattatctactacagccttagttcagcaactgcatac
cgctcattttgttaatgatatgcatatgaatatctctgtagccttgtcag
agttgtatattatagataaaaaattagaagcaaaggttaacaccctagaa
gaagtagtgctggcaatagggcaagatattgctaatattaagaccaggtt
agctactaaatgtcatgcttctttccaatacatttgtgtcacacccttac
cttataatacaaccactgactgggaaaagactaaagctcatttacaggga
atatgaagagatactgatatttctcatgacttagaacagttaaaggcaaa
attttcagatattagtaaaagtcatctggacacctggaacattgatgtat
tggctagagattggaaaaacaacctaagtgcattgaaccccctggattgg
gttcaatatataatcctacttgttattatttttggcattgttttattagt
aatcattgtgtttccactcatctttagagtgctcctgaggtctgtagcta
caacgaagcgggacatcctggaactttggctgaaaaataaaaaaagaaag
ggagaaatgccacactctccagtcaaatcagtttgacaagccggcttaaa
atctgctcatgaagcaaaaagagtttcaaggaagctctcttcctggagtc
tggcgttttaacccatacattaattttccactcccgcattagtctagtgt
atggatccacatgctctctaattagtattaccctattataagtgcctttt
aagattgaattctgacatagcttaaagcctcccccagtgttccagatccc
agatacagcaggagtttaacctattcagttacttattagcattacattaa
aacagagccattgctcaccggtctgcagaagagccggggattctcactga
gtagaaattcttttagtacaggctacattccatactaatagcaagttgat
tatctctctggacatgggggatttcctcagaacaagataggatttagcca
gggcccatgatttaggcctcagtgaccctcatattattcctggaagcccc
gtcagagtaagaccctgggtgccattaccataagtgggtatttctcgcgc
ctgtcacttaggcgctgacactcttagcgaca
gaattcccaatgaagctcaactcaaatataacgaggtaattaatctggga
aaggaaactccaagggactctgtgctgcttgatgccagacattgttgtgt
aaaaattcacagtgactcagagtcctttcaaagacattgcttccggtact
ggacccaaatgtgcttgctgggggaagagattctgtcagtaaaaccactt
agagttaattgttgctttggttcaagagggcctgtctgattctgccccta
cccacccattcccattttttggccctggcattcccctgtactggggcata
taaagtttgcgtgtccaatggacctctctttccagtgatggccgattagg
ccatctgttgatacatatgcacctagagtcaagagatccggggtattggt
tagttcataatgttgttgcacctacagggttgcagatcattttagctcct
tggatactttctctagctcctccattgggggccctgtgctccaaccaata
gctgactgtgagcatccacttctgtgtttgctaggccccggcctagtctc
aaaagagacagctatatcaaggtcctttcaggcaacgcttactagtgtat
gccatggtgtcatcgttttggaggctaattatgggatggatccctggata
tggcagtctctagatggtccatccttttgtctcagctccaaactttgtct
ctgtaactccttccatgggtgattgtttccaattctaagaaggggcaaag
tgtccacactttggtctttcattcttcagtttcatgtgtttagcaaattg
taacttatatctcagtatactaagttttctgggcttatatccacttatca
gtgagtacatataatttgagttcttttgtgattgtgtacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_98493566_98494305
seq2: B6Ng01-097I06.g_69_809

seq1  GAATTCCCAATGAAGCTCAACTCAAATATAACGAGGTAATTAATCTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAATGAAGCTCAACTCAAATATAACGAGGTAATTAATCTGGGA  50

seq1  AAGGAAACTCCAAGGGACTCTGTGCTGCTTGATGCCAGACATTGTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACTCCAAGGGACTCTGTGCTGCTTGATGCCAGACATTGTTGTGT  100

seq1  AAAAATTCACAGTGACTCAGAGTCCTTTCAAAGACATTGCTTCCGGTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCACAGTGACTCAGAGTCCTTTCAAAGACATTGCTTCCGGTACT  150

seq1  GGACCCAAATGTGCTTGCTGGGGGAAGAGATTCTGTCAGTAAAACCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAAATGTGCTTGCTGGGGGAAGAGATTCTGTCAGTAAAACCACTT  200

seq1  AGAGTTAATTGTTGCTTTGGTTCAAGAGGGCCTGTCTGATTCTGCCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAATTGTTGCTTTGGTTCAAGAGGGCCTGTCTGATTCTGCCCCTA  250

seq1  CCCACCCATTCCCATTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCATTCCCATTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATA  300

seq1  TAAAGTTTGCGTGTCCAATGGACCTCTCTTTCCAGTGATGGCCGATTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTGCGTGTCCAATGGACCTCTCTTTCCAGTGATGGCCGATTAGG  350

seq1  CCATCTGTTGATACATATGCACCTAGAGTCAAGAGATCCGGGGTATTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTTGATACATATGCACCTAGAGTCAAGAGATCCGGGGTATTGGT  400

seq1  TAGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCATTTTAGCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCATTTTAGCTCCT  450

seq1  TGGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGCTCCAACCAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGCTCCAACCAATA  500

seq1  GCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCCTAGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCCTAGTCTC  550

seq1  AAAAGAGACAGCTATATCAAGGTCCTTTCAGGCAACGCTTACTAGTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGACAGCTATATCAAGGTCCTTTCAGGCAACGCTTACTAGTGTAT  600

seq1  GCCATGGTGTCATCG-TTTGGAGGCTAATTATGGGATGGATCCCTGGATA  649
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCCATGGTGTCATCGTTTTGGAGGCTAATTATGGGATGGATCCCTGGATA  650

seq1  TGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT  700

seq1  CTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAAGAA  740
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAAGAA  741