BAC Information

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BAC

Clone NameB6Ng01-097L12
Chromosome3 (Build37)
Map Location 124,636,173 - 124,637,302
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817
Downstream geneLOC668820, Ndst4, Ugt8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L12.bB6Ng01-097L12.g
ACCDH908013DH908014
length7241,106
definitionDH908013|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L12, 5' end.DH908014|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaaaccatctggccctggcttttttggttgggaaggtt
ttcatgactgcttctatttctttaggagttatgggatcctttagatagtt
tacctgatcttgatttagttctggtatgtggtatctgtctataaaaaaaa
aatcatttcacctagattttctagttttgttgagtataagcttttatagt
aatagctggtgattttttaaaaatttccccagtttatcccttttcacttc
tgcttttttagtttaaatattttttctgtgtttgttagtttgattaaggg
tttgtctatcctgctggttttcttaaaaaaccaattcttggttttgttta
ttttttctcttgttctctttgtttctaattggttgctttcagcactgagt
ttgactatttgctgccttctactccccttggatgtgtttacttttttttt
tttcttctagagttttcaggtgtgctgttaagttgctagtatagtatctc
tccgatttctttatgagggcacttagtgctgtgagttttcctcctagcat
tgctttcattgagtcccataagtttgggtatgctgtgtcttcattttcat
tgaaatctagaaagtctttcatttcgttttttatttcttccttgaccagg
ttatcattgagtagagagttattcaggtgggtaagcagtttctcagaggt
agggggagaggagtgtggatgggg

gaattctgtgactacaatcaaatagaagtgtggatggatattgatagaca
aaaggcaatatcccatcactgtaaaattagtgttcatattttgttcttca
ttagcttataattaatttatttttgttttccttaattgccaaatttggag
atttttgaataaacaaagttattttcatctgtatttattggtctactagt
cttagtaatttcttggaatattctccataataattttcaatatttagctt
gtttgaaactaaaaatatttaccctgaaatctccattttcataatatagt
tgaaaaaatatgagtgtatgtttatgcaatttcattctattttaatcgaa
tataagtgttacacaatataaaaagtcacatgcaattctgtggtaaaatt
aaatcaccctccccccattaaaaatatttaaggagctaagaaagtcaaga
tgatatggagaaaatttataggcagattaacttctctttaagtcttaagt
catttactaggagttcaaaggttttgtgtgtaatctatatgttgttagga
cagtttgccaaatataatcatatttgaatgctctaatctcatgcttgtca
atttcatgtcatgtaaatagtaatgtggtaatcatttttactgaggcata
gttacccactagctaaaggtcaggccctatgttctcctctaattgtcttt
ttgctttgcttctgcgatgtatatctcctctagatgtttcataaggaatg
cagtgcttttctccaccccttgtggtcttctgaggccacaatgtccattt
cattttgcaataatgcacctataattgacacaggaatacattagaaacat
aagagggtaatttaacatgataccaagtaggcaaactaggaataatggaa
gaataaaggaaatgaaagtaatccagggaaattccaagtcatccttagtc
taaatagaacttctaatgaaaatagacaatactctcttagcactgatata
gtctagatgaaataacagtagaaaattctgagagcaacttttcaaagttt
atgctgagctaaaacgaagacttaagtccctttttccttatctagtactc
atccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_124636173_124637302
seq2: B6Ng01-097L12.g_68_1173

seq1  GAATTCTGTGACTACAATCAAATAGAAGTGTGGATGGATATTGATAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGACTACAATCAAATAGAAGTGTGGATGGATATTGATAGACA  50

seq1  AAAGGCAATATCCCATCACTGTAAAATTAGTGTTCATATTTTGTTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAATATCCCATCACTGTAAAATTAGTGTTCATATTTTGTTCTTCA  100

seq1  TTAGCTTATAATTAATTTATTTTTGTTTTCCTTAATTGCCAAATTTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTATAATTAATTTATTTTTGTTTTCCTTAATTGCCAAATTTGGAG  150

seq1  ATTTTTGAATAAACAAAGTTATTTTCATCTGTATTTATTGGTCTACTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAATAAACAAAGTTATTTTCATCTGTATTTATTGGTCTACTAGT  200

seq1  CTTAGTAATTTCTTGGAATATTCTCCATAATAATTTTCAATATTTAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAATTTCTTGGAATATTCTCCATAATAATTTTCAATATTTAGCTT  250

seq1  GTTTGAAACTAAAAATATTTACCCTGAAATCTCCATTTTCATAATATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAACTAAAAATATTTACCCTGAAATCTCCATTTTCATAATATAGT  300

seq1  TGAAAAAATATGAGTGTATGTTTATGCAATTTCATTCTATTTTAATCGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAATATGAGTGTATGTTTATGCAATTTCATTCTATTTTAATCGAA  350

seq1  TATAAGTGTTACACAATATAAAAAGTCACATGCAATTCTGTGGTAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTGTTACACAATATAAAAAGTCACATGCAATTCTGTGGTAAAATT  400

seq1  AAATCACCCTCCCCCCATTAAAAATATTTAAGGAGCTAAGAAAGTCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACCCTCCCCCCATTAAAAATATTTAAGGAGCTAAGAAAGTCAAGA  450

seq1  TGATATGGAGAAAATTTATAGGCAGATTAACTTCTCTTTAAGTCTTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGGAGAAAATTTATAGGCAGATTAACTTCTCTTTAAGTCTTAAGT  500

seq1  CATTTACTAGGAGTTCAAAGGTTTTGTGTGTAATCTATATGTTGTTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTAGGAGTTCAAAGGTTTTGTGTGTAATCTATATGTTGTTAGGA  550

seq1  CAGTTTGCCAAATATAATCATATTTGAATGCTCTAATCTCATGCTTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCCAAATATAATCATATTTGAATGCTCTAATCTCATGCTTGTCA  600

seq1  ATTTCATGTCATGTAAATAGTAATGTGGTAATCATTTTTACTGAGGCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGTCATGTAAATAGTAATGTGGTAATCATTTTTACTGAGGCATA  650

seq1  GTTACCCACTAGCTAAAGGTCAGGCCCTATGTTCTCCTCTAATTGTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCACTAGCTAAAGGTCAGGCCCTATGTTCTCCTCTAATTGTCTTT  700

seq1  TTGCTTTGCTTCTGCGATGTATATCTCCTCTAGATGTTTCATAAGGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGCTTCTGCGATGTATATCTCCTCTAGATGTTTCATAAGGAATG  750

seq1  CAGTGCTTTTCTCCACCCCTTGTGGTCTTCTGAGGCCACAATGTCCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTTTTCTCCACCCCTTGTGGTCTTCTGAGGCCACAATGTCCATTT  800

seq1  CATTTTGCAATAATGCACCTATAATTGACACAGGAATACATTAGAAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGCAATAATGCACCTATAATTGACACAGGAATACATTAGAAACAT  850

seq1  AAGAGGGTAATTTAACATGATACCAAGTAGGCAAAACTAGGAATAATGGG  900
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  AAGAGGGTAATTTAACATGATACCAAGTAGGC-AAACTAGGAATAAT-GG  898

seq1  AAGAATAAAGGAAATGAAAGTAATCCAGGGAAATTCCAAAGTCATCCTTT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  AAGAATAAAGGAAATGAAAGTAATCCAGGGAAATTCC-AAGTCATCC-TT  946

seq1  AGTCTAAATAAGGAACTTCCTAATGAAAATAGAACAATACTCCTCTTAGC  1000
      ||||||||||  |||||| ||||||||||||| |||||||| ||||||||
seq2  AGTCTAAATA--GAACTT-CTAATGAAAATAG-ACAATACT-CTCTTAGC  991

seq1  ACTGATATAGTCTAGATGAGAATAAACAGTAGAAAATTCTTTGAAGAGCA  1050
      ||||||||||||||||||| ||| ||||||||||||||||    ||||| 
seq2  ACTGATATAGTCTAGATGA-AAT-AACAGTAGAAAATTCT---GAGAGC-  1035

seq1  AAACTTTCAAAGTTTATGCTGAGCATAAAAACCAAAGGACTTAAGTTCCC  1100
      ||  ||||||||||||||||||||   ||||| ||  |||||||| ||||
seq2  AACTTTTCAAAGTTTATGCTGAGC--TAAAACGAA--GACTTAAG-TCCC  1080

seq1  TTTTTCTCTTAATCTAATTACTCACTCCTA  1130
      |||||| ||| |||| | |||||| |||||
seq2  TTTTTC-CTT-ATCT-AGTACTCA-TCCTA  1106


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