BAC Information

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BAC

Clone NameB6Ng01-098B19
Chromosome3 (Build37)
Map Location 23,417,344 - 23,418,514
singlet/doubletsinglet
Overlap geneLOC100039548
Upstream geneLOC675593, LOC100040378, LOC623751
Downstream geneEG635702, EG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098B19.bB6Ng01-098B19.g
ACCDH908295DH908296
length9901,166
definitionDH908295|Mus musculus domesticus DNA, BAC clone: B6Ng01-098B19, 5' end.DH908296|Mus musculus domesticus DNA, BAC clone: B6Ng01-098B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgtgtgctttgagctttagttaagtttcttttgtgaacttgt
gtgctcttgcatttgggacataggtgttcagaattgagactttctcttgg
tggattttccccttgattaatattaagtgtctttcttcatcacgcttgat
aacttttggttgaaagtatattttattggatatcaagatggcaatgcctg
cttgttttctgggaccatttgattagaagatcttttttccattcttttac
tttgagatagtacatgtctttgttgttgaggagtgtttcctgtatgcaga
aaaatgctggatcttgtttgcatatccagtcttatgtctttttatagata
ggtgagctgagtccattaatattgagagatgttaaagagagatgactgtt
ggttcctgatatatttgtttttgtaggtggttttctgtgtttatggctct
ctgtttttggctttgttgtgagattgcttaatatcttgtccttcctttgg
tgcaaccttccttgtgttgaagttttccttccaggatcctctgtaaggct
gggttggtagatactgtttgaattcagttttgtcatggaatattttggtt
tctctatttctgttgattgttttgctgggtatagtagcctgggctggcat
tttttattctcttagagtctgcatgtcctctgaccaggctcttctggctt
tcgcagtctctgttgagaagtctggtgtaattctgataggtctacttttt
gtgtgttacttggcctttttcccattaatcttttaacatcctttctttgc
tctgtgcatttagtgttttgataattatgtgacaagaaagattttctttg
tggtcccatttgtcaagtattctataggcttctttgtacctttatggtta
tttctttctttatgttggggaagtttcttctatgattttgttgagaaatt
ttcagatcctggaagtgggaacctccgttctcctctactt

gaattcaccatcccatgtgtgctaggcaagaactttgtgctctacattta
gcccttaccaatgttatttttatgccatatttattgtgaaatattttatt
ctatgtttctctaggtcccaaataaagccctgttaaaaactctcctttaa
gcttacatgtcactgatgacgtgagaatatggatgggaatctgttggtat
gaaaagatagagccatgaatctgttcatctcacccatcagtgagaaatat
gagcagtacacaaatataaaaaataagtactttttaggttccttggaggg
taatgccttaatgtttatggtttaaaattattgtttaagtaataatgtct
aatgataactgtttatgtggaaattttagaacaaatagctgtatttgtga
tgttaatctaatggtgtatatgacacatttagatgttcagagggcagaac
ctcaaaagtttttcatgcttaacagaaaaagtgtcaaggggagtcagagt
taactactcagaaaagtattcagaagtaagatttgttcatttaaacccat
ttacaaggctggataaattaagaaaatatggtaattactgaattgcttta
tttaacaaattgacaaatcaagacatatgctggcaaggctgttatgtgag
ttcagataattagcagtaacattgttttggcttctaatcttaataatcat
tattgaaatatttaatagagaaatcaaggccagtgatcaatctgtttttg
ttttgatttactattcaagaaactgatatgagtgtcagttatgcccagtt
aaatctctggcatgaacgtcaatactaaggcataaatgaaaatgcattta
taacagacaggaataccaagccattgacccttaatctatctttattaatt
tcaaccacatggtttttctatccttttgactctgatataacttctagcac
aaatatctcaaaatgcaattcaaatgattatgtcattttaataagatttt
gaagccaatgagagcaatccattattatcatcagtctttctgacttctgg
gctgcatctcatcaccttgccttaaaagccagtgttttctgccaattcta
aaggaaaagcttttcaagcaacagtaacttgctatcatgaaaattatctt
agttgaatctccaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23417344_23418514
seq2: B6Ng01-098B19.g_67_1232

seq1  GAATTCACCATCCCATGTGTGCTAGGCAAGAACTTTGTGCTCTACATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATCCCATGTGTGCTAGGCAAGAACTTTGTGCTCTACATTTA  50

seq1  GCCCTTACCAATGTTATTTTTATGCCATATTTATTGTGAAATATTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTACCAATGTTATTTTTATGCCATATTTATTGTGAAATATTTTATT  100

seq1  CTATGTTTCTCTAGGTCCCAAATAAAGCCCTGTTAAAAACTCTCCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCTCTAGGTCCCAAATAAAGCCCTGTTAAAAACTCTCCTTTAA  150

seq1  GCTTACATGTCACTGATGACGTGAGAATATGGATGGGAATCTGTTGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACATGTCACTGATGACGTGAGAATATGGATGGGAATCTGTTGGTAT  200

seq1  GAAAAGATAGAGCCATGAATCTGTTCATCTCACCCATCAGTGAGAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATAGAGCCATGAATCTGTTCATCTCACCCATCAGTGAGAAATAT  250

seq1  GAGCAGTACACAAATATAAAAAATAAGTACTTTTTAGGTTCCTTGGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTACACAAATATAAAAAATAAGTACTTTTTAGGTTCCTTGGAGGG  300

seq1  TAATGCCTTAATGTTTATGGTTTAAAATTATTGTTTAAGTAATAATGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCTTAATGTTTATGGTTTAAAATTATTGTTTAAGTAATAATGTCT  350

seq1  AATGATAACTGTTTATGTGGAAATTTTAGAACAAATAGCTGTATTTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAACTGTTTATGTGGAAATTTTAGAACAAATAGCTGTATTTGTGA  400

seq1  TGTTAATCTAATGGTGTATATGACACATTTAGATGTTCAGAGGGCAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCTAATGGTGTATATGACACATTTAGATGTTCAGAGGGCAGAAC  450

seq1  CTCAAAAGTTTTTCATGCTTAACAGAAAAAGTGTCAAGGGGAGTCAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGTTTTTCATGCTTAACAGAAAAAGTGTCAAGGGGAGTCAGAGT  500

seq1  TAACTACTCAGAAAAGTATTCAGAAGTAAGATTTGTTCATTTAAACCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACTCAGAAAAGTATTCAGAAGTAAGATTTGTTCATTTAAACCCAT  550

seq1  TTACAAGGCTGGATAAATTAAGAAAATATGGTAATTACTGAATTGCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGGCTGGATAAATTAAGAAAATATGGTAATTACTGAATTGCTTTA  600

seq1  TTTAACAAATTGACAAATCAAGACATATGCTGGCAAGGCTGTTATGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAATTGACAAATCAAGACATATGCTGGCAAGGCTGTTATGTGAG  650

seq1  TTCAGATAATTAGCAGTAACATTGTTTTGGCTTCTAATCTTAATAATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATAATTAGCAGTAACATTGTTTTGGCTTCTAATCTTAATAATCAT  700

seq1  TATTGAAATATTTAATAGAGAAATCAAGGCCAGTGATCAATCTGTTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAATATTTAATAGAGAAATCAAGGCCAGTGATCAATCTGTTTTTG  750

seq1  TTTTGATTTACTATTCAAGAAACTGATATGAGTGTCAGTTATGCCCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTACTATTCAAGAAACTGATATGAGTGTCAGTTATGCCCAGTT  800

seq1  AAATCTCTGGCATGAACGTCAATACTAAGGCATAAATGAAAATGCATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTGGCATGAACGTCAATACTAAGGCATAAATGAAAATGCATTTA  850

seq1  TAACAGACAGGAATACCAAGCCATTGACCCTTAATCTATCTTTATTAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGACAGGAATACCAAGCCATTGACCCTTAATCTATCTTTATTAATT  900

seq1  TCAACCACATGGTTTTTCTATCCTTTTGACTCTGATATAACTTCTAGCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACATGGTTTTTCTATCCTTTTGACTCTGATATAACTTCTAGCAC  950

seq1  AAATATCTCAAAATGCAATTCAAATGATTATTGTCATTTTAATAAGATTT  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATATCTCAAAATGCAATTCAAATGATTA-TGTCATTTTAATAAGATTT  999

seq1  TGAAGCCAATGAGAGCAATCCAATTATTATCATCAGTC-TTCTGACTTCT  1049
      ||||||||||||||||||||| |||||||||||||||| |||||||||| 
seq2  TGAAGCCAATGAGAGCAATCC-ATTATTATCATCAGTCTTTCTGACTTC-  1047

seq1  TGGGCTGCATCTCATCACCTTTGCCCTTAAAAGCCAGTGTTTTCTGCCCA  1099
      |||||||||||||||||||||   |||||||||||||||||||||||| |
seq2  TGGGCTGCATCTCATCACCTT--GCCTTAAAAGCCAGTGTTTTCTGCCAA  1095

seq1  TTCTAAAGGAGAAGCTTTCAAAGCAACAGTAACCTTGCTATCATG--AAT  1147
      |||||||||| |||||||  |||||||||||| ||||||||||||  |||
seq2  TTCTAAAGGAAAAGCTTTTCAAGCAACAGTAA-CTTGCTATCATGAAAAT  1144

seq1  TATCTTATGTTGGATCTCCCAAAG  1171
      ||||||| |||| |||| ||||||
seq2  TATCTTA-GTTGAATCT-CCAAAG  1166


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