BAC Information

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BAC

Clone NameB6Ng01-098B20
Chromosome3 (Build37)
Map Location 15,039,791 - 15,193,977
singlet/doubletdoublet
Overlap geneLOC100039985
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323
Downstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098B20.bB6Ng01-098B20.g
ACCDH908297DH908298
length5901,132
definitionDH908297|Mus musculus domesticus DNA, BAC clone: B6Ng01-098B20, 5' end.DH908298|Mus musculus domesticus DNA, BAC clone: B6Ng01-098B20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,193,388 - 15,193,977)(15,039,791 - 15,040,934)
sequence
gaattccaaagcagaaaaggatattatataaaaatgataaaggatgaaat
gaacagaatactaatgtaattcatattggtttattaatgaataaaagaac
aaaggtatgtgcatctatagaaattaaaacaaagcagagaaggagaaaga
gagagatagaaacagagacagagagacagagagaagaaaagaaacaaaaa
taaaagttcagtccataaaactaaacaattcctggaaattccatgaaaat
aaaatttgaaaaatcagtaatttgagaacctgaatttctcctacaaaata
aatttgtatgcctcaagactctttgcaagcctcactctgtgaaacccaaa
taaaataagaagaacattaagtctatggcacagtgccttatttggtgtta
aagacgtaggctgaggctctgtctttactagcaatagggtctggaaatac
tgtctttgccaagggtataagaagggcaaaactatgcagagaaccttggt
gacaactatagtaggtattatgcaagacaggccaaaatctctctctctct
ctctctctctctctctctctctctctctctctctctctct
gaattcatcagcttattatgatttctcctgatgtgttgcacatgaatatt
ctcaaacatttcctttccttttcagaaactattaatgaagtgagaataag
atgaactaggctcctgtttgttcccgtgtgcaacggtcaggcaaagtttc
aggaatttatcctgatgtaaattatcagcaggagcatctcaggaagcagt
taatgaagaatatgattttagcatcagaatataatcagttatgataaata
ttttcaatatatattatgttttcaaactccctaacaatggtgtactcacc
aataggtgtaaacaaccttaaggaagcagtgtgaagacagaacagcagac
agaattaagcccagacagttatctttatgatgcctattaaagcggaaaaa
tagaaactttcttgtgtggtcaaattgttatctttcattaaatttgaata
tatcatcttctttgtaagtcctacaatcattcggagcaaagtctgccttt
agtccctgctgaattaaatatttacacactcgcagcacatatgcagaaat
gaagcaacatttactccagcttactgagaaaaagattcacctctagaaga
atgcaattgccattgtgaggcagaggttgtgatgcccattaaaagtggct
tgaaaggccttgaagatgggctacagggcaggctctgataatggcttatt
ctgtgactggggccagaagaaaccacagctgaaaagaacaaatgcttcat
tttatagttgctggataacatatataaggcatccataaaagtaacacttg
aagtgtaaaaataaaaccacacacattacagatcaaactcactaagaatg
aaaaacgaaaatcaaaattaaagcaggatactttacttcgctctaccaga
ctaacaaatttaaaaactgttattgaagatggaaagatatgcatgtttta
tactagaaggtaaaatactgcaatgttagaccatgccctttttttttaaa
aaagtaatactgacttgattttttgcatgtaatttttgcatgtataatgt
taagatattatatacactccatgtatatatggctagtgattttatggtgt
tatgtgctaatggatcagaattcattttatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15193388_15193977
seq2: B6Ng01-098B20.b_43_632 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50

seq1  AGATTTTGGCCTGTCTTGCATAATACCTACTATAGTTGTCACCAAGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGGCCTGTCTTGCATAATACCTACTATAGTTGTCACCAAGGTTC  100

seq1  TCTGCATAGTTTTGCCCTTCTTATACCCTTGGCAAAGACAGTATTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATAGTTTTGCCCTTCTTATACCCTTGGCAAAGACAGTATTTCCAG  150

seq1  ACCCTATTGCTAGTAAAGACAGAGCCTCAGCCTACGTCTTTAACACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATTGCTAGTAAAGACAGAGCCTCAGCCTACGTCTTTAACACCAAA  200

seq1  TAAGGCACTGTGCCATAGACTTAATGTTCTTCTTATTTTATTTGGGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCACTGTGCCATAGACTTAATGTTCTTCTTATTTTATTTGGGTTTC  250

seq1  ACAGAGTGAGGCTTGCAAAGAGTCTTGAGGCATACAAATTTATTTTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTGAGGCTTGCAAAGAGTCTTGAGGCATACAAATTTATTTTGTAG  300

seq1  GAGAAATTCAGGTTCTCAAATTACTGATTTTTCAAATTTTATTTTCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATTCAGGTTCTCAAATTACTGATTTTTCAAATTTTATTTTCATGG  350

seq1  AATTTCCAGGAATTGTTTAGTTTTATGGACTGAACTTTTATTTTTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCAGGAATTGTTTAGTTTTATGGACTGAACTTTTATTTTTGTTTC  400

seq1  TTTTCTTCTCTCTGTCTCTCTGTCTCTGTTTCTATCTCTCTCTTTCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTCTCTGTCTCTCTGTCTCTGTTTCTATCTCTCTCTTTCTCCT  450

seq1  TCTCTGCTTTGTTTTAATTTCTATAGATGCACATACCTTTGTTCTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTTTGTTTTAATTTCTATAGATGCACATACCTTTGTTCTTTTAT  500

seq1  TCATTAATAAACCAATATGAATTACATTAGTATTCTGTTCATTTCATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATAAACCAATATGAATTACATTAGTATTCTGTTCATTTCATCCT  550

seq1  TTATCATTTTTATATAATATCCTTTTCTGCTTTGGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTTTTATATAATATCCTTTTCTGCTTTGGAATTC  590

seq1: chr3_15039791_15040934
seq2: B6Ng01-098B20.g_66_1197

seq1  GAATTCATCAGCTTATTATGATTTCTCCTGATGTGTTGCACATGAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGCTTATTATGATTTCTCCTGATGTGTTGCACATGAATATT  50

seq1  CTCAAACATTTCCTTTCCTTTTCAGAAACTATTAATGAAGTGAGAATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACATTTCCTTTCCTTTTCAGAAACTATTAATGAAGTGAGAATAAG  100

seq1  ATGAACTAGGCTCCTGTTTGTTCCCGTGTGCAACGGTCAGGCAAAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAGGCTCCTGTTTGTTCCCGTGTGCAACGGTCAGGCAAAGTTTC  150

seq1  AGGAATTTATCCTGATGTAAATTATCAGCAGGAGCATCTCAGGAAGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTATCCTGATGTAAATTATCAGCAGGAGCATCTCAGGAAGCAGT  200

seq1  TAATGAAGAATATGATTTTAGCATCAGAATATAATCAGTTATGATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGAATATGATTTTAGCATCAGAATATAATCAGTTATGATAAATA  250

seq1  TTTTCAATATATATTATGTTTTCAAACTCCCTAACAATGGTGTACTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATATATATTATGTTTTCAAACTCCCTAACAATGGTGTACTCACC  300

seq1  AATAGGTGTAAACAACCTTAAGGAAGCAGTGTGAAGACAGAACAGCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTGTAAACAACCTTAAGGAAGCAGTGTGAAGACAGAACAGCAGAC  350

seq1  AGAATTAAGCCCAGACAGTTATCTTTATGATGCCTATTAAAGCGGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAAGCCCAGACAGTTATCTTTATGATGCCTATTAAAGCGGAAAAA  400

seq1  TAGAAACTTTCTTGTGTGGTCAAATTGTTATCTTTCATTAAATTTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTTTCTTGTGTGGTCAAATTGTTATCTTTCATTAAATTTGAATA  450

seq1  TATCATCTTCTTTGTAAGTCCTACAATCATTCGGAGCAAAGTCTGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTTCTTTGTAAGTCCTACAATCATTCGGAGCAAAGTCTGCCTTT  500

seq1  AGTCCCTGCTGAATTAAATATTTACACACTCGCAGCACATATGCAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGCTGAATTAAATATTTACACACTCGCAGCACATATGCAGAAAT  550

seq1  GAAGCAACATTTACTCCAGCTTACTGAGAAAAAGATTCACCTCTAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAACATTTACTCCAGCTTACTGAGAAAAAGATTCACCTCTAGAAGA  600

seq1  ATGCAATTGCCATTGTGAGGCAGAGGTTGTGATGCCCATTAAAAGTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTGCCATTGTGAGGCAGAGGTTGTGATGCCCATTAAAAGTGGCT  650

seq1  TGAAAGGCCTTGAAGATGGGCTACAGGGCAGGCTCTGATAATGGCTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGCCTTGAAGATGGGCTACAGGGCAGGCTCTGATAATGGCTTATT  700

seq1  CTGTGACTGGGGCCAGAAGAAACCACAGCTGAAAAGAACAAATGCTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTGGGGCCAGAAGAAACCACAGCTGAAAAGAACAAATGCTTCAT  750

seq1  TTTATAGTTGCTGGATAACATATATAAGGCATCCATAAAAGTAACACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGTTGCTGGATAACATATATAAGGCATCCATAAAAGTAACACTTG  800

seq1  AAGTGTAAAAATAAAACCACACACATTACAGATCAAACTCACTAAGAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAAAATAAAACCACACACATTACAGATCAAACTCACTAAGAATG  850

seq1  AAAAACGAAAATCAAAATTAAAGCAGGATACTTTACTTCGCTCTACCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACGAAAATCAAAATTAAAGCAGGATACTTTACTTCGCTCTACCAGA  900

seq1  CTAACAAATTTAAAAACTGTTATTGAAGATGGAAAGATATGCATGTTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTAACAAATTTAAAAACTGTTATTGAAGATGGAAAGATATGCATG-TTTT  949

seq1  ATACTAGAAGGTAAAATACTGCAATGTTTAGACCATGCCCTTTTTTTTTA  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATACTAGAAGGTAAAATACTGCAATG-TTAGACCATGCCCTTTTTTTTTA  998

seq1  AAAAAGTAATACTGAACTTGATTTTTTGCATGGTAATTTTTGGCATGTAT  1050
      |||||||||||||| |||||||||||||||| ||||||||| ||||||||
seq2  AAAAAGTAATACTG-ACTTGATTTTTTGCAT-GTAATTTTT-GCATGTAT  1045

seq1  ATTGTTTAAGATTATTATATACACT-CATGTATATAT-GCTAGTGAATTT  1098
      | || |||||| ||||||||||||| ||||||||||| ||||||||  ||
seq2  AATG-TTAAGA-TATTATATACACTCCATGTATATATGGCTAGTGA--TT  1091

seq1  TTATGGTTGTTTATGTGTTTACATGGATCAGAAATTCATTTTATAT  1144
      |||||||   ||||||| |   ||||||||| ||||||||||||||
seq2  TTATGGT--GTTATGTGCT--AATGGATCAG-AATTCATTTTATAT  1132