BAC Information

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BAC

Clone NameB6Ng01-098C15
Chromosome3 (Build37)
Map Location 76,182,104 - 76,183,083
singlet/doubletsinglet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098C15.bB6Ng01-098C15.g
ACCDH908334DH908335
length1,267999
definitionDH908334|Mus musculus domesticus DNA, BAC clone: B6Ng01-098C15, 5' end.DH908335|Mus musculus domesticus DNA, BAC clone: B6Ng01-098C15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaaacaccatcagatctttctacaaaaggctatactcaacaaa
ctggagaacctggatgaaatggacaagtttctagacagataccaggtacc
aaagttaaatcaggatctggttatgatctaaacagtcctatattccctaa
agaaatagaagcagtcattaatagtctcccagccaaaacaagcccaggac
aagatgggtttagtgtagaccttcaaagaacatctaatcccagttcttca
caaaatagaagcagaaggtactctacccaactcattctatgaagccacaa
ttactctgatatctaaaccacagaaagacccaaaaagatagagaacttca
gacaaatttcccttatgaatatcgacgaaaaatcctcaataaaattctcg
gtaaccaaatccaagaacacatcaaaacaatcatccatcctgaccaagta
ggtttcattccagggatgcagggatggttcaatatacggaaatccatcaa
tgtaatccactatataaacaaactcaaagacaaaaaccacatgatcctct
cattagatgcggaaaaagcatttgaaaaaatccaacaaccattcatgata
aaagtcttggaaagatcaggaattcaaggcccatacctaaacatgataaa
agcaatctacagcaaaccagtagccaacatcaaaataaatggtgagactc
tggaagcaatcccactaaaatcagggactagacaaggctgcccactttct
ccctacctatacaacattgcagttgaagtcctagccagagcaattcgaca
acaaaaggagatcaagggtaaaaaaattggaaaggaagaagtcaaaatat
cactttttgcagatgatatgatagtatatataagtgaccctaaaaattcc
actagagaattttgaaaacctgataaacagcttcagtgaagtaactggaa
ataaaattaactcaacaagtaaatggcctttctgtacacaatggataaac
aggctgagaaagaaattagggaaacacacccttctcatagttaaaaatat
ataaaatttgtggtgtgactcttactaagaaaggtgaaagaatctgtatt
gaaaagaacttcaagtctctgaagaaagaattaagaaaaatctcaaaaga
tgggaagatctcccttgctcatggtagcagagatcatcgttgttaattgc
atcatggccaagcatcacagaattccatgcatccattaattcccaaccaa
tttcttggaccgaagtg
gaattctttgtttagctctgtacccaatttttagtgtgattatttgagtt
tctggagtcactatattttgaccagttgagtctttgcattaactaatgac
tgccagttttatagagatatttgggggggcagcaaaattgaaagtgtcac
taacctaatgttaaaacagagatatttaagaggcagtttaacaatattgt
tacttagcacaataacagtagaaagtgactccctagggaccatggaccac
ctagccaatggcttttgaccaggtttatctcatcagacataaattgcttc
ctgtggagtaggtatcagatacaatcagaaagtagtttgtaggtcaaccg
cagaagtgacactagtgtatcagtgttcacattatgacaggaatgttaga
aatatattaatactaaagagagagagagagagagacagagagagagagag
agagagagagagagagaaagtaagaaaaaatgattattattttaaagtat
tcaacatctctatttaataagaaaatataaatataaatcaaaatttatat
gaagtaacttactctagtcagaatggcagttaccaagaaaagaaataaca
ataaatgctgttgaagaaatggagaaaggagaatatttatacttaatgct
agtgtaagttagtataagcacgatggaaatcagtgtgaatgtgtctcaaa
aagccctaaatctataactatgtatgatttagctaagcaaaatatagaat
agatagatgatagaaagacatagataataattaggtgttagatacttgcc
attgtgatcattgatttgtaattcatgacagctataaaatgtagtcagcc
tacatgtctataatctgatgatgaataagaaaaaatggtgaatatacaga
aatattatttacctacaagggaaatagaattattaaatttttaggaaaat
gtttaaatcataaaaatattattttaaggtgagtacccatcagacagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76182104_76183083
seq2: B6Ng01-098C15.g_66_1043

seq1  GAATTCTTTGTTTAGCTCTGTACCCAATTTTTAGTGTGATTATTTGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCAATTTTTAGTGTGATTATTTGAGTT  50

seq1  TCTGGAGTCACTATATTTTGACCAGTTGAGTCTTTGCATTAACTAATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCACTATATTTTGACCAGTTGAGTCTTTGCATTAACTAATGAC  100

seq1  TGCCAGTTTTATAGAGATATTTGGGGGGGCAGCAAAATTGAAAGTGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTTTTATAGAGATATTTGGGGGGGCAGCAAAATTGAAAGTGTCAC  150

seq1  TAACCTAATGTTAAAACAGAGATATTTAAGAGGCAGTTTAACAATATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAATGTTAAAACAGAGATATTTAAGAGGCAGTTTAACAATATTGT  200

seq1  TACTTAGCACAATAACAGTAGAAAGTGACTCCCTAGGGACCATGGACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGCACAATAACAGTAGAAAGTGACTCCCTAGGGACCATGGACCAC  250

seq1  CTAGCCAATGGCTTTTGACCAGGTTTATCTCATCAGACATAAATTGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAATGGCTTTTGACCAGGTTTATCTCATCAGACATAAATTGCTTC  300

seq1  CTGTGGAGTAGGTATCAGATACAATCAGAAAGTAGTTTGTAGGTCAACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAGTAGGTATCAGATACAATCAGAAAGTAGTTTGTAGGTCAACCG  350

seq1  CAGAAGTGACACTAGTGTATCAGTGTTCACATTATGACAGGAATGTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGACACTAGTGTATCAGTGTTCACATTATGACAGGAATGTTAGA  400

seq1  AATATATTAATACTAAAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAATACTAAAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAG  450

seq1  AGAGAGAGAGAGAGAGAAAGTAAGAAAAAATGATTATTATTTTAAAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAAAGTAAGAAAAAATGATTATTATTTTAAAGTAT  500

seq1  TCAACATCTCTATTTAATAAGAAAATATAAATATAAATCAAAATTTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCTCTATTTAATAAGAAAATATAAATATAAATCAAAATTTATAT  550

seq1  GAAGTAACTTACTCTAGTCAGAATGGCAGTTACCAAGAAAAGAAATAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACTTACTCTAGTCAGAATGGCAGTTACCAAGAAAAGAAATAACA  600

seq1  ATAAATGCTGTTGAAGAAATGGAGAAAGGAGAATATTTATACTTAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCTGTTGAAGAAATGGAGAAAGGAGAATATTTATACTTAATGCT  650

seq1  AGTGTAAGTTAGTATAAGCACGATGGAAATCAGTGTGAATGTGTCTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAGTTAGTATAAGCACGATGGAAATCAGTGTGAATGTGTCTCAAA  700

seq1  AAGCCCTAAATCTATAACTATGTATGATTTAGCTAAGCAAAATATAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTAAATCTATAACTATGTATGATTTAGCTAAGCAAAATATAGAAT  750

seq1  AGATAGATGATAGAAAGACATAGATAATAATTAGGTGTTAGATACTTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATGATAGAAAGACATAGATAATAATTAGGTGTTAGATACTTGCC  800

seq1  ATTGTGATCATTGATTTGTAATTCATGACAGCTATAAAATGTAGTCAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATCATTGATTTGTAATTCATGACAGCTATAAAATGTAGTCAGCC  850

seq1  TACATGTCTATAATCTGATGAATGAATAAGAAAAAATGGTGAATATACAG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TACATGTCTATAATCTGATG-ATGAATAAGAAAAAATGGTGAATATACAG  899

seq1  AAATATTATTTACCTACAAGGGAAAATAGAATTATTAAATTTTTAGGAAA  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATATTATTTACCTACAAGGG-AAATAGAATTATTAAATTTTTAGGAAA  948

seq1  ATGTTTAAATCATAAAAATATTATTTTAAG  980
      ||||||||||||||||||||||||||||||
seq2  ATGTTTAAATCATAAAAATATTATTTTAAG  978