BAC Information

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BAC

Clone NameB6Ng01-098I23
Chromosome3 (Build37)
Map Location 60,615,567 - 60,708,212
singlet/doubletdoublet
Overlap geneLOC100040501, EG666853
Upstream geneLOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485, Mbnl1, LOC676933
Downstream geneP2ry1, Rap2b, LOC666891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098I23.bB6Ng01-098I23.g
ACCDH908617DH908618
length9861,125
definitionDH908617|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I23, 5' end.DH908618|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,707,641 - 60,708,212)(60,615,567 - 60,616,688)
sequence
gaattcttcggtgttttctgttgagcaagcatagaagttacagatttatt
taaccagcttttattgtgagatgtttttctttctcctttaggtttgacag
ataaattacatagttattgtagcttggatttatagttgtcattttgaaat
taaacgacatcctaaatctgtatagctttaagaatatctattcagaatct
gctccagccacatttgtacctcatcaatatcatgccgtttccgtttaaat
ttcttcccctcattctaccaatattttgtagcttggttccagtattatta
tcttggcacctactctgagtttccttgtactgtgattcacatgtctctgg
ccactgcaagaatggtcttttaaaaaggcatactgtggctgttctaagag
attggtgagggtctagcgcctggggaaagggttccctttagcatttattc
cctgtgtcagtgctgtcttgtgtgtgctctttggtatggctcccttcttt
ttatgattttaaaaaatgttctaaattaagtttttaagaatttcatttga
tgtgttttgatcactttcaacacccaacttctcaaatcctccccccaccc
ccatgatttgatgtcattttttcttaaatacatcaaggttaatttgtgct
gctcacatgctcatggttgtgtggtcatccactataatgtagtcaacctt
ctagggtccatattcttaaagaagactgttcctttcccagctatcacctg
ccaatagctcctcagcctacttttcctcctccagattggatgtttgtctt
gtttgtgcttacagatccttgtgcatgctaacacaacttctatgaattca
tgtaataccactaccctgttatgcccagtaaacagaattttgctgtagtc
acccactgctttctgtgtcttacaagcattccattccttccaagatgttc
cctgatccccagaaaacagagttatatatagaggtc
gaattcactgtaagagcttaattagacacacaggctaaagccaaagctgg
gaattattacatgtggtaaacagggttaaagaggaactttgaagcaagat
tttctaagagatattaattaacaatgcagaattatttaggctattgtaga
atttttttaatttaggctcaggtatctgatgccttccaaacaggtatcaa
gaaacaaattaaattattaggaaccaacctgtcataaatcagacagattc
aaggtttctctgaattaatttataatgctaatttctcaccatttatatct
cattgccataactgccacattgccaataaaatgatgcaaaccctcaagac
ctgcaaacagtcaacagcctcagagacaggagggaagcctctggtggatg
actaattagccagttccacttatctcagctttgacatttcaggaaagtcc
gccattctggcatttggaactggggaattccggtgtaaccagagtcacgt
gagacccggattctttgagcacagctgtgaaaccagaacaaaatgctgtg
acattaacatgcgaattacagggaaaagagtttccccattaacttcctgg
gtcatcattgaaagtttagacaggcagatatctgatggcaatttaactgt
gcatgtgtttgtaggatagcattagtgtgaaaaggaattcacccccaacc
tggatgttcgaccctggacagccccagtgggcaactgtttcagagtatga
tgtgttttgtcagcatcccccaatgcatccttccagtcagaatgcattta
gtgaccaaaagctacagaggaagaaagctcagacattttaccctctgcac
cccaatggctgcatccactgtcaaggtctccctaaatactagtttctctg
ttccatcctgctccctgccctttcctccccaaaatgttaatttccagtga
actttcagagtccattacagtgactttttttgtagaaatggaccttcagc
caaagtaaagtggcattttgagagctatccttgtgctgtcgtcctaaaag
cactcacaatccattattgattgattttgttcagcaaaacaggccagatt
ttttctataccaaatgtatccaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60707641_60708212
seq2: B6Ng01-098I23.b_49_620 (reverse)

seq1  TGTTGAAAGTGATCAAAACACATCAAATGAAATTCTTAAAAACTTAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGTGATCAAAACACATCAAATGAAATTCTTAAAAACTTAATTT  50

seq1  AGAACATTTTTTAAAATCATAAAAAGAAGGGAGCCATACCAAAGAGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTTTTAAAATCATAAAAAGAAGGGAGCCATACCAAAGAGCACA  100

seq1  CACAAGACAGCACTGACACAGGGAATAAATGCTAAAGGGAACCCTTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGACAGCACTGACACAGGGAATAAATGCTAAAGGGAACCCTTTCCC  150

seq1  CAGGCGCTAGACCCTCACCAATCTCTTAGAACAGCCACAGTATGCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGCTAGACCCTCACCAATCTCTTAGAACAGCCACAGTATGCCTTTT  200

seq1  TAAAAGACCATTCTTGCAGTGGCCAGAGACATGTGAATCACAGTACAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACCATTCTTGCAGTGGCCAGAGACATGTGAATCACAGTACAAGG  250

seq1  AAACTCAGAGTAGGTGCCAAGATAATAATACTGGAACCAAGCTACAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAGTAGGTGCCAAGATAATAATACTGGAACCAAGCTACAAAAT  300

seq1  ATTGGTAGAATGAGGGGAAGAAATTTAAACGGAAACGGCATGATATTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTAGAATGAGGGGAAGAAATTTAAACGGAAACGGCATGATATTGAT  350

seq1  GAGGTACAAATGTGGCTGGAGCAGATTCTGAATAGATATTCTTAAAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACAAATGTGGCTGGAGCAGATTCTGAATAGATATTCTTAAAGCTA  400

seq1  TACAGATTTAGGATGTCGTTTAATTTCAAAATGACAACTATAAATCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATTTAGGATGTCGTTTAATTTCAAAATGACAACTATAAATCCAAG  450

seq1  CTACAATAACTATGTAATTTATCTGTCAAACCTAAAGGAGAAAGAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATAACTATGTAATTTATCTGTCAAACCTAAAGGAGAAAGAAAAAC  500

seq1  ATCTCACAATAAAAGCTGGTTAAATAAATCTGTAACTTCTATGCTTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAATAAAAGCTGGTTAAATAAATCTGTAACTTCTATGCTTGCTC  550

seq1  AACAGAAAACACCGAAGAATTC  572
      ||||||||||||||||||||||
seq2  AACAGAAAACACCGAAGAATTC  572

seq1: chr3_60615567_60616688
seq2: B6Ng01-098I23.g_66_1190

seq1  GAATTCACTGTAAGAGCTTAATTAGACACACAGGCTAAAGCCAAAGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTAAGAGCTTAATTAGACACACAGGCTAAAGCCAAAGCTGG  50

seq1  GAATTATTACATGTGGTAAACAGGGTTAAAGAGGAACTTTGAAGCAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTACATGTGGTAAACAGGGTTAAAGAGGAACTTTGAAGCAAGAT  100

seq1  TTTCTAAGAGATATTAATTAACAATGCAGAATTATTTAGGCTATTGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGAGATATTAATTAACAATGCAGAATTATTTAGGCTATTGTAGA  150

seq1  ATTTTTTTAATTTAGGCTCAGGTATCTGATGCCTTCCAAACAGGTATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAATTTAGGCTCAGGTATCTGATGCCTTCCAAACAGGTATCAA  200

seq1  GAAACAAATTAAATTATTAGGAACCAACCTGTCATAAATCAGACAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAATTAAATTATTAGGAACCAACCTGTCATAAATCAGACAGATTC  250

seq1  AAGGTTTCTCTGAATTAATTTATAATGCTAATTTCTCACCATTTATATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCTCTGAATTAATTTATAATGCTAATTTCTCACCATTTATATCT  300

seq1  CATTGCCATAACTGCCACATTGCCAATAAAATGATGCAAACCCTCAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCATAACTGCCACATTGCCAATAAAATGATGCAAACCCTCAAGAC  350

seq1  CTGCAAACAGTCAACAGCCTCAGAGACAGGAGGGAAGCCTCTGGTGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACAGTCAACAGCCTCAGAGACAGGAGGGAAGCCTCTGGTGGATG  400

seq1  ACTAATTAGCCAGTTCCACTTATCTCAGCTTTGACATTTCAGGAAAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTAGCCAGTTCCACTTATCTCAGCTTTGACATTTCAGGAAAGTCC  450

seq1  GCCATTCTGGCATTTGGAACTGGGGAATTCCGGTGTAACCAGAGTCACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCTGGCATTTGGAACTGGGGAATTCCGGTGTAACCAGAGTCACGT  500

seq1  GAGACCCGGATTCTTTGAGCACAGCTGTGAAACCAGAACAAAATGCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCGGATTCTTTGAGCACAGCTGTGAAACCAGAACAAAATGCTGTG  550

seq1  ACATTAACATGCGAATTACAGGGAAAAGAGTTTCCCCATTAACTTCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAACATGCGAATTACAGGGAAAAGAGTTTCCCCATTAACTTCCTGG  600

seq1  GTCATCATTGAAAGTTTAGACAGGCAGATATCTGATGGCAATTTAACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCATTGAAAGTTTAGACAGGCAGATATCTGATGGCAATTTAACTGT  650

seq1  GCATGTGTTTGTAGGATAGCATTAGTGTGAAAAGGAATTCACCCCCAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTTTGTAGGATAGCATTAGTGTGAAAAGGAATTCACCCCCAACC  700

seq1  TGGATGTTCGACCCTGGACAGCCCCAGTGGGCAACTGTTTCAGAGTATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTTCGACCCTGGACAGCCCCAGTGGGCAACTGTTTCAGAGTATGA  750

seq1  TGTGTTTTGTCAGCATCCCCCAATGCATCCTTCCAGTCAGAATGCATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTGTCAGCATCCCCCAATGCATCCTTCCAGTCAGAATGCATTTA  800

seq1  GTGACCAAAAGCTACAGAGGAAGAAAGCTCAGACATTTTACCCTCTGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAAAAGCTACAGAGGAAGAAAGCTCAGACATTTTACCCTCTGCAC  850

seq1  CCCAATGGCTGCATCCACTGTCAAGGTCTCCCTAAATACTAGTTTCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGCTGCATCCACTGTCAAGGTCTCCCTAAATACTAGTTTCTCTG  900

seq1  TTCCATCCTGCTCCCTGCCCTTTCCTCCCCAAAATGTTAATTTCCAGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCTGCTCCCTGCCCTTTCCTCCCCAAAATGTTAATTTCCAGTGA  950

seq1  ACTTTCAGAGTCCATTACAGTGAC-TATTTTGTAGAAATGGACCTTCAGC  999
      |||||||||||||||||||||||| | |||||||||||||||||||||||
seq2  ACTTTCAGAGTCCATTACAGTGACTTTTTTTGTAGAAATGGACCTTCAGC  1000

seq1  CAAAGGTAAAGTGGCATTTTGAGAGCTATCC-TGTGCTGTCGTCCTAAAA  1048
      |||| |||||||||||||||||||||||||| |||||||||||||| |||
seq2  CAAA-GTAAAGTGGCATTTTGAGAGCTATCCTTGTGCTGTCGTCCT-AAA  1048

seq1  AGCACTCACATGCAATTATGAATTGATTT--GTCAGCAAAAACAGG-CAG  1095
      ||||||||||  | |||||  ||||||||   ||||| |||||||| |||
seq2  AGCACTCACAATCCATTATTGATTGATTTTGTTCAGC-AAAACAGGCCAG  1097

seq1  ATATTTTTCATTACAAATGTA-CCAAGA  1122
      || ||||  ||  |||||||| ||||||
seq2  ATTTTTTCTATACCAAATGTATCCAAGA  1125