BAC Information

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BAC

Clone NameB6Ng01-099H12
Chromosome3 (Build37)
Map Location 41,059,187 - 41,059,395
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099H12.bB6Ng01-099H12.g
ACCDH909252DH909253
length858864
definitionDH909252|Mus musculus domesticus DNA, BAC clone: B6Ng01-099H12, 5' end.DH909253|Mus musculus domesticus DNA, BAC clone: B6Ng01-099H12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacccccccccccccccgtgcccatttctttgaggctttcccac
actttcttctctataagtttcagtgtctctggttttatgtggagttcctt
gagccacttagacttgagcttgtacaaggagataagaatggatcaatttg
cattcttctacatgataatttccagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccactgaatggttttagctcccttgtcaaagattagg
tgaccgtaggtgtgtgggttcatttctgggtttaaaattctattccattg
acatacctgtctgtcactataccagtaccatgcagtttttatcacaattg
ttctgtagtacagcttgaggtcaggcatggtgattccaccagagattttt
ttatcattgagaagagtttttgatatagtaaaaatggctatcttgccgaa
agcaatctgcagattcaatgcaatccccatcaaaattccaactcaattct
tcaatgagttagaaagggcaatttgaaaattcatctggaataacatttgt
caattcttgattttagagcataagccattggtgttctgtttaggaaaatt
tttcctgcgtccatattttccccaatttctcttctattagattcaatgta
tctggttttatgtgagggcccttgatccacttggacttgagctttgtaca
gggagataagaatggatcagtttttctatcctctacatgatgaccaacag
ttgaaccagcaccatttgttgaaaatgctgtctttttttccactggatgg
ttttagctccctgccatagatcaagtgaccataggtgtgtgggttctatt
ccaggtct
gaattcctgaacagaacaccaatggcttgggctgtaagatcaacaaatgg
gccctcaaaaaaaaaaaaaaaattacaaaccttctgtaaggcaaaagaca
ctgtcaataagacaaaaaggccaccaacagattgggaaaggatctttaca
aatcctcaatcagataagggactaatatccaatatatataaaggaactca
ggaagatggactccagaaaagcaaataaccctatttaaaaatggggcaca
gagataaacaaagaattctcaactgacgaataccgaatggctgagaagca
cctgaaaaaatgttcaacatgctaaatcatcagggaaatgcaaatcaaaa
caaccctgagatgccacctcacaccagtcagaatggctaagatcaaaaat
tcaggtgactgcggatgctggcgaggatatggaaaaagagggatactcct
ccattgttggtgggattgcaagcttgtacaaccactctggaaatcagtct
ggtgcttcctcagaaaactggacatagtactacagatagatccagcaatt
tctctcctgggcatatacccagaagatgttccaacttctaataaagacac
atgctccactatattctttttcgttttaatttttttattagatattttct
ttatatacatttcaaatgctctcccgaaagttccctatacccttccctct
gccctgatcccctacccaccccactcccacttcttgcccctggcatttcc
cttgtattgcgcatatgaaagtttgcaataccaaggggcctcttttccca
atgatggcctactaggccatctttatcttcacatgcagtagagataagaa
ctctgggggtactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059187_41059395
seq2: B6Ng01-099H12.b_716_904 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATG  50
      |||||  |||||||                   ||| |||||||||||||
seq2  AGACC--TGGAATA-------------------GAACCCACACACCTATG  29

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGG-AAAAAAGA  99
      ||||||||||||  | | ||||||||||||||||||||||| ||||||||
seq2  GTCACTTGATCTATGGC-AGGGAGCTAAAACCATCCAGTGGAAAAAAAGA  78

seq1  CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAA  149
      |||||||||||||||||||||||||  |||||| | || |||||||||| 
seq2  CAGCATTTTCAACAAATGGTGCTGGTTCAACTGTTGGTCATCATGTAGAG  128

seq1  GA-ATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAA  198
      || |    || ||||||| || ||||||| ||||| ||| |||| || ||
seq2  GATAGAAAAACTGATCCATTCTTATCTCCCTGTACAAAGCTCAAGTCCAA  178

seq1  GTGGATCAAGG  209
      |||||||||||
seq2  GTGGATCAAGG  189