BAC Information

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BAC

Clone NameB6Ng01-099M13
Chromosome3 (Build37)
Map Location 124,177,148 - 124,177,805
singlet/doubletsinglet
Overlap genenone
Upstream genePrss12, EG668804, Ndst3, LOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik
Downstream gene1700003H04Rik, LOC668817, LOC668820, Ndst4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099M13.bB6Ng01-099M13.g
ACCDH909482DH909483
length1,2721,008
definitionDH909482|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M13, 5' end.DH909483|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttaatagggacggggtttcgttttctggctctctcttgctt
cttgcactctggctcctgaagatgtaagcaataaagttttgccgcagaag
attctggtctgtggtgttcttcctggccgggcgtgagaacgcgtctaata
acaattggtgccgaattccgggacgagaaaaaaaaactcgggactggcgc
aaggaagatccctcattccagaaccagaactgcgggtcgcggtaataaag
gttcccgtaaagcagactgttaagaaggattcaactgtatgaattcagaa
cttttcagctggggaacgagagtaccagtgagtacagctttacgaggtaa
gtctgatcttgaactttctaaggaaattcaagacagtctatcagaagtaa
agtggaaaatgtttggccttgaattttttctaatgttagaagcccttttg
ttccttttcacatgttatcaagtggttaaggcagggcggattctagatga
aattcagggcaagctatcagaagtaaagcggggagagagagtaggaacaa
agaggaaatatggtacacaaaataagtatacaggcctttccaagggtctt
gaacccgaggaaaagttaaggttaggtaggaatacctggagagagattag
aagaaaaagaggaaaaagggaaaagaagaaagatcaattagcggaggtct
ctaggaaaaggagcctgtgctcatcgctggatgggctcggggagccagct
cttagtagctctgaagcagatgaagaattctcctctgaggaaacagactg
ggaggaagaagcagctcattatgagaaaaaagggtaccagccaggtaaag
tgctagctaatcagttaaggaagccaaaagcggctggcgaaggccagttt
gctgattggcctcagggcagtcggtttcaaggtccgccctatgcgagtcc
cgccctgcgtagtgcgtcagcaatgcgcagagaggcagtgcgcagagagg
cagtgcgcagactcattcattctcagagaggaacaaaggaaaatacaaca
ggcatttccagtctttgaggagcggagggggggcgtgttccacgcctccg
tagaatacttaacaaataagaaattgcgagtcgggtccgtaaatacggga
accaatgctaatttacttgggtgcagttagacagggctccccgcatgcct
aactctgcgtgtactgccaaacgggtgtgaagggccgcttctcctagtat
gtggcaacaaatatgggaaatg
gaattctttgtttagctctgagccccattttttaatagggttatttgttt
ttctggagtccaccttcttcagttctttatatatattggatattagtccc
ctatctgatttaggatacgtaaagatcctttccgaatctgttggtggcct
ttatgtcttattgatgatgttttcttgccttacagaagctttgcaatttt
atgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tttattcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctgctctatcagcatccttaatcatcagggaaatgcaaataaaaat
taacctgtccagcaggtcaagttattcgtgggtctcaaggggactcctcc
taaaaccaaatggggggtgagagagaaaggaagccaagcacagaaaagac
acagagtcaatctgaatcttgtcaaggctttgttttattcagcaaaactt
gtagtttttatacaaaaagatcaaagggaaataacccttacgcagaaggg
caggggagggggcagtggtaattttccttggtgactacaatgatatctaa
aagtacatattgtggttatgacatctgctgtttgtgtcagttagggctgg
cgtcatcttttggtaattgttggtgaccttcatctggacttagtcagctt
gaggaggcagtccatctgggaacagtccgttggtgacctttgtctggact
tagtcaccttgggaaggaggtccaattttatgttctaagacttggtagtt
cacttggattattataaagaatttagttttggctcccaacatctccctcg
tctgtattaatttagtagggccagtctactaagggtgatggaatagtttg
ttaatcttgtgatgaatgggctttaaccatttggagtgggggagcactga
cctgatcctctgttggaggctgtgatgacccacactgtggctcttcgtac
tttgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_124177148_124177805
seq2: B6Ng01-099M13.g_422_1073

seq1  GTCCAGCAGGTCCAGTTATCCGTGGGTCTCAAGGGGACTCCTCCTAAAAC  50
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  GTCCAGCAGGTCAAGTTATTCGTGGGTCTCAAGGGGACTCCTCCTAAAAC  50

seq1  CAAATGTGGGGTGAAAGAGAAAGGAGACCAAGCACAGAAACGACACGGAG  100
      |||||| ||||||| ||||||||||  ||||||||||||| ||||| |||
seq2  CAAATGGGGGGTGAGAGAGAAAGGAAGCCAAGCACAGAAAAGACACAGAG  100

seq1  CCAAATCTGAATCTTGTCAAGGTCTCATTGTGTTCAGCAAAACTTACAGT  150
       | |||||||||||||||||||  |  || | |||||||||||||  |||
seq2  TC-AATCTGAATCTTGTCAAGGCTTTGTTTTATTCAGCAAAACTTGTAGT  149

seq1  TTTTATACAAAAAG------GGGAAATAACCCTTATGCAGAAGGGCAGGG  194
      ||||||||||||||      ||||||||||||||| ||||||||||||||
seq2  TTTTATACAAAAAGATCAAAGGGAAATAACCCTTACGCAGAAGGGCAGGG  199

seq1  GA-GGGGCAGTGGTAATTTTCCTTGGTGACTACAAGGGAGGCATGGTATC  243
      || |||||||||||||||||||||||||||||||        ||| ||||
seq2  GAGGGGGCAGTGGTAATTTTCCTTGGTGACTACA--------ATGATATC  241

seq1  TAAAAGTTCATCTTGTGGTTATGACGTCTGCTGTTTGCGTCAGTCAGGTC  293
      ||||||| ||| ||||||||||||| ||||||||||| |||||| ||| |
seq2  TAAAAGTACATATTGTGGTTATGACATCTGCTGTTTGTGTCAGTTAGGGC  291

seq1  TGGCGTTATCTTGTGGTAATTATTGGTGACCTTCATCTGGACTTAGTCAG  343
      |||||| ||||| |||||||| ||||||||||||||||||||||||||||
seq2  TGGCGTCATCTTTTGGTAATTGTTGGTGACCTTCATCTGGACTTAGTCAG  341

seq1  TTTAAGGAGGGAGTCTATCTGGGAACAGTCCATTGGTGACCTTTGTCTGG  393
       || |||||| |||| ||||||||||||||| ||||||||||||||||||
seq2  CTTGAGGAGGCAGTCCATCTGGGAACAGTCCGTTGGTGACCTTTGTCTGG  391

seq1  ACTTAGTCACCTTGGGGAGGAGGTCCAACTTTATGTCCTAAGACTTGGTA  443
      |||||||||||||||| ||||||||||| ||||||| |||||||||||||
seq2  ACTTAGTCACCTTGGGAAGGAGGTCCAATTTTATGTTCTAAGACTTGGTA  441

seq1  GTTCACTTAAATTATTATAAAGAATTTAGTTTTGGCTCCCAACATCTCCC  493
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTGGATTATTATAAAGAATTTAGTTTTGGCTCCCAACATCTCCC  491

seq1  CCGTCTGTATTAATTTAGTAAGGCCAAGTTCACTCAGGCTGATGGAATAG  543
       ||||||||||||||||||| |||| |||  ||| ||| |||||||||||
seq2  TCGTCTGTATTAATTTAGTAGGGCC-AGTCTACTAAGGGTGATGGAATAG  540

seq1  TTAGTTCATTTTGTGATGAATGGGCTTTGACCATTTGG-CTGGGGGAGCA  592
      || ||| || |||||||||||||||||| |||||||||  ||||||||||
seq2  TTTGTTAATCTTGTGATGAATGGGCTTTAACCATTTGGAGTGGGGGAGCA  590

seq1  TTGACCTGATTCCTCCCGTGGGTGCTGTCATGACCCACACTTGTGGCTCT  642
       |||||||| |||||   |||  ||||| ||||||||||| |||||||||
seq2  CTGACCTGA-TCCTCTGTTGGAGGCTGTGATGACCCACAC-TGTGGCTCT  638

seq1  TGGTACCTTTTGGGGA  658
      | ||||  ||||||||
seq2  TCGTAC--TTTGGGGA  652