BAC Information

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BAC

Clone NameB6Ng01-101D13
Chromosome3 (Build37)
Map Location 32,783,360 - 32,784,517
singlet/doubletsinglet
Overlap geneUsp13
Upstream geneKcnmb2, LOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5
Downstream genePex2, EG545512, LOC100041058, Ttc14, Ccdc39
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101D13.bB6Ng01-101D13.g
ACCDH910479DH910480
length1,157240
definitionDH910479|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D13, 5' end.DH910480|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactctatcactctattgaaagtccccatcctcagtaacagacc
attatggcctaacatcaataataatctcactggaatttgttcagaacgat
gtttcctcacaatgatgttccttccctaagcctgaccatgttcttggtta
aaaatctctacttgtcctcgttggagtcatggccaagccctcaggatggt
ccgtcttgaatagagatctgctatattatcttagcaagtatttacataac
attttcctttagtgatgggaatcatgtcaatcatttcaaaatgaaggtat
cagcaatgacatctaccctaactacctttcttgaggtaaggcttcctgtg
tggctgaggaatttttcattacatccctatgaccaaggggttaacattgt
cattaccctatgagagaaataagaactgaggtgccattttcctaggtagc
atccaaggtacccatgagtaagtgctggagcccaagatgccactacacac
acacacacacacacacacacacacacacacacacacacacacactcatac
ctagcctggcttcaaagctgagttctgaaactttgcaggctgtcgcagtt
tggctaccctttctcccagcagaccacaatcttaaccaaacagtactagc
cttaactctgacatctgatattaacatgtcatccctccactcccacagtt
tcactgcctcttcactctctctacttcttggtgtttgttttcttgtgact
tgagacagggtgttgtcactctacagcccaggctgacctctggtctcctt
gcccacttctctgatctcatttgtaagctctctaccctgtccaggatgct
ctagctactcatcatcctcacccctgcttcagaccagggccaccactgtc
tctttttcagatgcttggtactttctcaggtctgttggacgcctccttcc
ccagactgggcaactcacatcaccctccagttccctgctgatggctcaac
ttcttaacctcattgctagctggaattacttcttatataattctgcagat
tatctgtgactgaaaaagtccatatctaaatggcgaagaacgaagacctc
tggtgacagtccttcaagttaacagatatgtgctgaatgtctggtacaca
gctacca
tcagtcctaaatgggatgtcttcatcaagtccttccctcagggttcaggg
agctgtatagaagagggagtagaaagattgtaagagtcagaggagatgga
taacaccaagaaagcagagtcgtttacatacacgacaggactggtgcgcc
taagaacgcatagagactacggtggcatgcacagggcttgcataggtcca
agacagatggggggtcccagcactgggggtgggggggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32783360_32784517
seq2: B6Ng01-101D13.b_44_1200 (reverse)

seq1  TGGTAGCTGTGTACCAAGCATGTCAGACACTATTCTGTT-ACTTGTAGAT  49
      ||||||||||||||||  ||| |||| |||   |||||| ||||| ||  
seq2  TGGTAGCTGTGTACCAGACAT-TCAG-CACATATCTGTTAACTTGAAG-G  47

seq1  ACTGTCTACATGGAGTC-TCTGTCTTCGCATTTTAG-TATGGGC-TTTTC  96
      |||||| ||  |  ||| ||  |||||||  ||||| ||||| | |||||
seq2  ACTGTC-ACCAGAGGTCTTCGTTCTTCGCCATTTAGATATGGACTTTTTC  96

seq1  AGTCACAGATAATCATGCAGAATTATATAAG-AGTAATTCCAGCTAGCAA  145
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  AGTCACAGATAATC-TGCAGAATTATATAAGAAGTAATTCCAGCTAGCAA  145

seq1  TGGAGGTTAAGAAGTTGAGCCATCAGCAGGGAACTGGGAGGGTGATGGTG  195
      | ||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  T-GAGGTTAAGAAGTTGAGCCATCAGCAGGGAACT-GGAGGGTGAT-GTG  192

seq1  AGTTGCCCAGTCTGGGG-AGGAGGCGTCCAACAGACCTGAGAAAGTTACC  244
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  AGTTGCCCAGTCTGGGGAAGGAGGCGTCCAACAGACCTGAGAAAG-TACC  241

seq1  AAGCATCTGGAAAAGAGACAGTGGTGG-CCTGGTCTTGAAGCAGGGGTGA  293
      ||||||||| ||||||||||||||||| ||||||| ||||||||||||||
seq2  AAGCATCTGAAAAAGAGACAGTGGTGGCCCTGGTC-TGAAGCAGGGGTGA  290

seq1  GGATGATGAGTAGCTAGAGCATCCTGGACAGGGTAGAGAGCTTACAAATG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATGAGTAGCTAGAGCATCCTGGACAGGGTAGAGAGCTTACAAATG  340

seq1  AGATCAGAGAAGTGGGCAAGGAGACCAGAGGTCAGCCTGGGCTGTAGAGT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGAGAAGTGGGCAAGGAGACCAGAGGTCAGCCTGGGCTGTAGAGT  390

seq1  GACAACACCCTGTCTCAAGTCACAAGAAAAC-AACACCAAGAAGTAGAGA  442
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACAACACCCTGTCTCAAGTCACAAGAAAACAAACACCAAGAAGTAGAGA  440

seq1  GAGTGAAGAGGCAGTG-AACTGTGGGAGTGGAGGGATGACATGTTAATAT  491
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGTGAAGAGGCAGTGAAACTGTGGGAGTGGAGGGATGACATGTTAATAT  490

seq1  CAGATGTCAGAGTTAAGGCTAGTACTGTTTGGTTAAGATTGTGGTCTGCT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTCAGAGTTAAGGCTAGTACTGTTTGGTTAAGATTGTGGTCTGCT  540

seq1  GGGAGAAAGGGTAGCCAAACTGCGACAGCCTGCAAAGTTTCAGAACTCAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAGGGTAGCCAAACTGCGACAGCCTGCAAAGTTTCAGAACTCAG  590

seq1  CTTTGAAGCCAGGCTAGGTATGAGTGTGTGTGTGTGTGTGTGTGTGTGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGCCAGGCTAGGTATGAGTGTGTGTGTGTGTGTGTGTGTGTGTG  640

seq1  TGTGTGTGTGTGTGTGTGTGTGTAGTGGCATCTTGGGCTCCAGCACTTAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTAGTGGCATCTTGGGCTCCAGCACTTAC  690

seq1  TCATGGGTACCTTGGATGCTACCTAGGAAAATGGCACCTCAGTTCTTATT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTACCTTGGATGCTACCTAGGAAAATGGCACCTCAGTTCTTATT  740

seq1  TCTCTCATAGGGTAATGACAATGTTAACCCCTTGGTCATAGGGATGTAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATAGGGTAATGACAATGTTAACCCCTTGGTCATAGGGATGTAAT  790

seq1  GAAAAATTCCTCAGCCACACAGGAAGCCTTACCTCAAGAAAGGTAGTTAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTCCTCAGCCACACAGGAAGCCTTACCTCAAGAAAGGTAGTTAG  840

seq1  GGTAGATGTCATTGCTGATACCTTCATTTTGAAATGATTGACATGATTCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATGTCATTGCTGATACCTTCATTTTGAAATGATTGACATGATTCC  890

seq1  CATCACTAAAGGAAAATGTTATGTAAATACTTGCTAAGATAATATAGCAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTAAAGGAAAATGTTATGTAAATACTTGCTAAGATAATATAGCAG  940

seq1  ATCTCTATTCAAGACGGACCATCCTGAGGGCTTGGCCATGACTCCAACGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATTCAAGACGGACCATCCTGAGGGCTTGGCCATGACTCCAACGA  990

seq1  GGACAAGTAGAGATTTTTAACCAAGAACATGGTCAGGCTTAGGGAAGGAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGTAGAGATTTTTAACCAAGAACATGGTCAGGCTTAGGGAAGGAA  1040

seq1  CATCATTGTGAGGAAACATCGTTCTGAACAAATTCCAGTGAGATTATTAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGTGAGGAAACATCGTTCTGAACAAATTCCAGTGAGATTATTAT  1090

seq1  TGATGTTAGGCCATAATGGTCTGTTACTGAGGATGGGGACTTTCAATAGA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTAGGCCATAATGGTCTGTTACTGAGGATGGGGACTTTCAATAGA  1140

seq1  GTGATAGAGTGGAATTC  1158
      |||||||||||||||||
seq2  GTGATAGAGTGGAATTC  1157