BAC Information

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BAC

Clone NameB6Ng01-101D22
Chromosome3 (Build37)
Map Location 89,077,313 - 89,178,212
singlet/doubletdoublet
Overlap geneEfna1, Efna3, Efna4, Adam15, Dcst1, Dcst2
Upstream gene1700021C14Rik, Cct3, 0610031J06Rik, Tmem79, Smg5, Paqr6, Bglap-rs1, Bglap2, LOC627995, Bglap1, Pmf1, Slc25a44, LOC667989, Sema4a, LOC546802, Lmna, 2700083E18Rik, Rab25, Mapbpip, Ubqln4, LOC545536, Ssr2, Arhgef2, Rxfp4, 2810403A07Rik, Rit1, Syt11, 5830417I10Rik, Msto1, Dap3, Ash1l, Rusc1, Fdps, LOC628070, Pklr, Hcn3, Clk2, Scamp3, 1110013L07Rik, Gba, Mtx1, Thbs3, Muc1, Trim46, Krtcap2, Dpm3, Rag1ap1
Downstream geneZbtb7b, Lenep, Flad1, Cks1b, Shc1, Pygo2, Pbxip1, Pmvk, Kcnn3, LOC668078, Adar, Chrnb2, Ube2q1, LOC668087, She, Il6ra, Atp8b2, LOC668102, Hax1, Ubap2l, 4933434E20Rik, 1700094D03Rik, Tpm3, Nup210l, Rps27, Rab13, Jtb, Creb3l4, LOC100042397, Slc39a1, Crtc2, Dennd4b, Gatad2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101D22.bB6Ng01-101D22.g
ACCDH910495DH910496
length684576
definitionDH910495|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D22, 5' end.DH910496|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,077,313 - 89,077,994)(89,177,637 - 89,178,212)
sequence
gaattccacatgcttctgcctcccaagtgctggaattaaaggtgtgcacc
atcacaccccactaaggctaagtctcttgtctctgccttccatctcccta
tcagagtgctgcgattacagatgtgcacaacagcatctggctttttatgt
gggctctggacaagatttaggttgtcaggattgtgcagtaactgcttttt
taaaaaaacttaattaaattttgggatgacaggatctcataaagctcaag
ctggccttgaacatgctatgtacagttgaggatgctcttgaattcctgat
ctcctgcctctaccttctgagtgctggaattataggcaagcatcacctcc
ctccctctctccctccctccctccttctctgtataaaatatttattcagt
gtgtgtgtgttccatgtttagaggtcagagaacaatttgggaaagcaaat
tctctccttcagtcacatgggagctggggatcaaatccaagttgtcaggt
tggcagcaagcgcctttttatttgctgagctatctcactggcgcgctctc
tctctctggtttttatttatttatttatttatttatttatttatttattt
atttatttaatatatatgagtacactgtttgctgtcttcagacacaccag
aagagggcatcagatcccattacagattgggtga
gaattccaggacagcctggtctacccattgagaccgcgcctcaaaacaga
aaagagataaaagtgaatgcatgcatcccttagccagctaagatcctccc
gaggccaggggagcctccccccccccccagtccttcccaccctgcctctc
acagcgaggtctcacacccagcacaagcacacacacccttgggctttatt
taccctcctaaatgttttacattctccaaactcaaaggtctctgcttcct
cgcctcccttagcctgtgcctaacaaaccccaggctgccccgaaccccag
ctcatttctctccttttcagtgaagtcttttttgtttacagattggttgg
ggttttgtttgttttgtacccaccccacccccttccccagacaggctttc
tctgtgtagcttggctggccttgaactcacagagatttgcctgtctctgc
cttcctagtgctggaagtgtcttccgagtgccactccacaccctgctctg
tgaagtttcttttttcttttttgaggggggatggggagtttgaaacacct
ttccccactacacacactgtaagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_89077313_89077994
seq2: B6Ng01-101D22.b_43_726

seq1  GAATTCCACATGCTTCTGCCTCCCAAGTGCTGGAATTAAAGGTGTGCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATGCTTCTGCCTCCCAAGTGCTGGAATTAAAGGTGTGCACC  50

seq1  ATCACACCCCACTAAGGCTAAGTCTCTTGTCTCTGCCTTCCATCTCCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACCCCACTAAGGCTAAGTCTCTTGTCTCTGCCTTCCATCTCCCTA  100

seq1  TCAGAGTGCTGCGATTACAGATGTGCACAACAGCATCTGGCTTTTTATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGCTGCGATTACAGATGTGCACAACAGCATCTGGCTTTTTATGT  150

seq1  GGGCTCTGGACAAGATTTAGGTTGTCAGGATTGTGCAGTAACTGCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTGGACAAGATTTAGGTTGTCAGGATTGTGCAGTAACTGCTTTTT  200

seq1  TAAAAAAACTTAATTAAATTTTGGGATGACAGGATCTCATAAAGCTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAACTTAATTAAATTTTGGGATGACAGGATCTCATAAAGCTCAAG  250

seq1  CTGGCCTTGAACATGCTATGTACAGTTGAGGATGCTCTTGAATTCCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTGAACATGCTATGTACAGTTGAGGATGCTCTTGAATTCCTGAT  300

seq1  CTCCTGCCTCTACCTTCTGAGTGCTGGAATTATAGGCAAGCATCACCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCTCTACCTTCTGAGTGCTGGAATTATAGGCAAGCATCACCTCC  350

seq1  CTCCCTCTCTCCCTCCCTCCCTCCTTCTCTGTATAAAATATTTATTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCTCCCTCCCTCCCTCCTTCTCTGTATAAAATATTTATTCAGT  400

seq1  GTGTGTGTGTTCCATGTTTAGAGGTCAGAGAACAATTTGGGAAAGCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTCCATGTTTAGAGGTCAGAGAACAATTTGGGAAAGCAAAT  450

seq1  TCTCTCCTTCAGTCACATGGGAGCTGGGGATCAAATCCAAGTTGTCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTCAGTCACATGGGAGCTGGGGATCAAATCCAAGTTGTCAGGT  500

seq1  TGGCAGCAAGCGCCTTTTTATTTGCTGAGCTATCTCACTGGCGCGCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCAAGCGCCTTTTTATTTGCTGAGCTATCTCACTGGCGCGCTCTC  550

seq1  TCTCTCTGGTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGGTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTT  600

seq1  ATTTATTTAATATATATGAGTACACTG-TTGCTGTCTTCAGACACACCAG  649
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTTATTTAATATATATGAGTACACTGTTTGCTGTCTTCAGACACACCAG  650

seq1  AAGAGGGCATCAGATCCCATTACAGA-TGGGTGA  682
      |||||||||||||||||||||||||| |||||||
seq2  AAGAGGGCATCAGATCCCATTACAGATTGGGTGA  684

seq1: chr3_89177637_89178212
seq2: B6Ng01-101D22.g_70_645 (reverse)

seq1  TAGCTTACAGTGTGTGTAGTGGGGAGAGGTGTTTCAAACTCCCCATCCCC  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGCTTACAGTGTGTGTAGTGGGGAAAGGTGTTTCAAACTCCCCATCCCC  50

seq1  CCTCAAAAAAGAAAAAAGAAACTTCACAGAGCAGGGTGTGGAGTGGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAAAAGAAAAAAGAAACTTCACAGAGCAGGGTGTGGAGTGGCACT  100

seq1  CGGAAGACACTTCCAGCACTAGGAAGGCAGAGACAGGCAAATCTCTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGACACTTCCAGCACTAGGAAGGCAGAGACAGGCAAATCTCTGTGA  150

seq1  GTTCAAGGCCAGCCAAGCTACACAGAGAAAGCCTGTCTGGGGAAGGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGGCCAGCCAAGCTACACAGAGAAAGCCTGTCTGGGGAAGGGGGT  200

seq1  GGGGTGGGTACAAAACAAACAAAACCCCAACCAATCTGTAAACAAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGTACAAAACAAACAAAACCCCAACCAATCTGTAAACAAAAAAG  250

seq1  ACTTCACTGAAAAGGAGAGAAATGAGCTGGGGTTCGGGGCAGCCTGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTGAAAAGGAGAGAAATGAGCTGGGGTTCGGGGCAGCCTGGGGT  300

seq1  TTGTTAGGCACAGGCTAAGGGAGGCGAGGAAGCAGAGACCTTTGAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGCACAGGCTAAGGGAGGCGAGGAAGCAGAGACCTTTGAGTTTG  350

seq1  GAGAATGTAAAACATTTAGGAGGGTAAATAAAGCCCAAGGGTGTGTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTAAAACATTTAGGAGGGTAAATAAAGCCCAAGGGTGTGTGTGC  400

seq1  TTGTGCTGGGTGTGAGACCTCGCTGTGAGAGGCAGGGTGGGAAGGACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGGGTGTGAGACCTCGCTGTGAGAGGCAGGGTGGGAAGGACTGG  450

seq1  GGGGGGGGGGAGGCTCCCCTGGCCTCGGGAGGATCTTAGCTGGCTAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGAGGCTCCCCTGGCCTCGGGAGGATCTTAGCTGGCTAAGGG  500

seq1  ATGCATGCATTCACTTTTATCTCTTTTCTGTTTTGAGGCGCGGTCTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCATTCACTTTTATCTCTTTTCTGTTTTGAGGCGCGGTCTCAAT  550

seq1  GGGTAGACCAGGCTGTCCTGGAATTC  576
      ||||||||||||||||||||||||||
seq2  GGGTAGACCAGGCTGTCCTGGAATTC  576