BAC Information

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BAC

Clone NameB6Ng01-101L18
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101L18.bB6Ng01-101L18.g
ACCDH910827DH910828
length8941,204
definitionDH910827|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L18, 5' end.DH910828|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatgggcttatttgattt
tctggagttcaccttcttgagttctttatatatattgggtattagtttcc
tatctgatttaggatagataaagatcctttcccaatctgttggtgggctt
tttgtctcatggatggtgtcttttgccttgcagaagctttgcagttttat
gaggtaccatttgtcaattctcgatctaacagcacaagccattgctgatc
tatttaggaatttttcccatgtgcccatatctttgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagatagaaatggttcaattcaca
ttcttctacatgataaccaccaattgtgccagcgccatttgttgaaaatg
ctgtctttttcccagtgaatggtttttgctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgca
agcttcaatagatacaagaagattgaaataattcagtgcattttgtcaga
ttaccatggattaaagctggacatcaacaatgacagaaacaacagaaagc
ctatatactcatggaaattgatcaattctcttctcaattatcaggaaaga
tataaagaaagaaattaaagactttctcaaattcactgaaaattagggca
caatagacccaaatttatgggggaaatatgaaagcaggactaagaggaaa
gttcatagcaccaagtgccctcataaagaagttgggagagttct
gaattccaagcccttgatcttggtcaaggacgttctaggactgttggaac
actggcggaaggctttagccatgtcagaattcaatttttaaaagcactta
taataggaaaatactgaaagagagcacgtggatctatacactagactaac
gcggtaattgaacgcaggaatgaaaaattaatgtatgggtagagaacgct
agactccaggaggagagcttccttgaaactcttttgcctcatgagtactt
ttaagcctttcggcttgtccagttgactcgaccagagagcgtagcaggag
aagaatgctgaatgatccattcttatctccttgtacatagctcaagtcta
aatacatcaaagagctctacatgaaaccagagacactgaaacttatagag
gagaaatgggaagatcatcaaagatatggatacaggggaaagattcctga
acataatagcaatggcttttgaagtaagatcaggaaatgtcaaataggac
ctcataaaattgcaaagattctgtaagacaaaagacactgtcaataagac
caaaaagcaaccaacagattgggaaaagatgtttcccaatcccaaatcag
atagggggctaatatccaatatatataaaaaactcaagaagtcggactcc
agaaaaataaactaccctattaaaaaatgttgttggtgggattgcaagct
tgtacaaccactctggaaatcagtctggcagttccttagaatattggaca
tagtactactggagttaaccggtaagaaggacacatgctccactatgttc
atagcagccttatttataatagccagaagctggaaagaacccagatgcct
ctcaacagaggaatagatacagaaaatgtggtacatttacacattggagt
actactcagctactaaaaagaatgagtttatgaaattctagccaatggat
ggacctggaggcatcatcttgagtgagttaccctatcacaaggactcgca
cagtatgtactcattgatagtggatattagccagaacttaggatacagga
atatagaacatttgctaaccgcatgaaactcagagatgagacaaggtgtg
aacctttgccttctgaaattggacaaacccatggagagttaagaacagtt
tggactgggcaagatgtaccatcaggacatccatttcaggtacctctcaa
taca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-101L18.b_49_562 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||||||||||||||||||||||| ||||||||||| |||||||| ||
seq2  CCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCAAAAACCATTCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
       ||| |||||||||||||||||||||||||| |||||||||| |||| ||
seq2  CTGGGAAAAAGACAGCATTTTCAACAAATGGCGCTGGCACAATTGGTGGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      ||||||||||||||||| ||||||| ||| | ||||||||||||||||||
seq2  TATCATGTAGAAGAATGTGAATTGAACCATTTCTATCTCCTTGTACTAAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  GTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      |||||||||||||||||| |||||||||||  ||||||||| |||| |||
seq2  ACTTATAGAGGAGAAAGTAGGGAAAAGCCTCAAAGATATGGGCACATGGG  250

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||||||||  ||||| ||||||||||||||||||| |||| |||||| 
seq2  AAAAATTCCTAAATAGATCAGCAATGGCTTGTGCTGTTAGATCGAGAATT  300

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  GACAAATGGTACCTCATAAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350

seq1  CGTCAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACCT  399
      | || || ||||||||||  ||||||||||||||||||||||||||| ||
seq2  CATCCATGAGACAAAAAGCCCACCAACAGATTGGGAAAGGATCTTTATCT  400

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      |||||||||||||||||  ||||||| ||||||||||| |||||||||||
seq2  ATCCTAAATCAGATAGGAAACTAATACCCAATATATATAAAGAACTCAAG  450

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499
      |||||| | ||||||||||||||||| |||||| ||||||||||||||||
seq2  AAGGTGAACTCCAGAAAATCAAATAAGCCCATT-AAAAATGGGGCTCAGA  499

seq1  GCTAAACAAAGAATT  514
      |||||||||||||||
seq2  GCTAAACAAAGAATT  514