BAC Information

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BAC

Clone NameB6Ng01-103B22
Chromosome3 (Build37)
Map Location 143,234,448 - 143,393,274
singlet/doubletdoublet
Overlap geneEG668889, EG621809
Upstream geneGbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883, 1700001N15Rik
Downstream geneLOC100039938, LOC100039952, Lmo4, LOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103B22.bB6Ng01-103B22.g
ACCDH911811DH911812
length6321,115
definitionDH911811|Mus musculus domesticus DNA, BAC clone: B6Ng01-103B22, 5' end.DH911812|Mus musculus domesticus DNA, BAC clone: B6Ng01-103B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,234,448 - 143,235,079)(143,392,149 - 143,393,274)
sequence
gaattcttttagcaaagatctttttctttgttgtttttttaaatagacac
attattgttttagaaagactttacactgacaacaaaattaatggaaagct
aacaattttttttcatttatctccttacatgtgtgcagtctcactaatga
tccgcatgcccctcagaaatacacatttgtaagattggtgaacttccacc
aacacatagccatcactctaagttaacagtttacaccaaggttaactttt
ggtaatgcacatgctatgggtttttatgttatttctacttgtatttttat
tattttcattaatttatttatttacttcacatctgactatcagtcccctg
cttccagtactctctcacacagatctttctcctctctccccacccctccc
tttcctctgagaaagggaagctttccccaccccacccttgggtatccccc
tactatggcacatcatgtcacagcaggacatggtacatccttttccattg
aggccagacatggtagcccagttaggggaacaggatccacaggcaggcaa
cagtttcagctacagttgttggggtaaccgcatgaagaccaaattacact
tctgctacatatatgtgttgggggggaaagga
gaattctacagcttttgagtcactgcttcttgctctgctagaggcagaat
ttcagtttgcatttactccgggaaacttgggtgaggaatttaataaatct
tttggtaactgtgaattgtttgaaaggagagttggagaagacaaaataaa
tgacagagcaaggaaagcatacagcccagtcactttattaaggctggact
tgctagttatgtaggtgtctgagagcataatgggcctatttaaaataagc
aaggcatttccagggtgtgcctaaaaggaattggtctactggaaaaaata
ccttttgaatattctttaggaaacagtaagcactaacaacggtaccaaga
cattaggaaatataatgctaatttaactttattatttttttttttttttg
gtggactgtggtttttaacggatggaattgtccgaggcttacttcttctt
tctcttccccagcccccaaacttcagacatgctgaactgtttccttgcgt
gccattttaaataaaagtatttgtaaagggaacacaatgttaagagagat
gcataaataagacaagtgataattgcagtgtctaaaaggagactcctcat
gctgcacatcgtgccgtggctgcttacacagagaaagggacagttgctat
cctgcactgtgccttccatcaagtcacggggtataaatctggcctataaa
tgatcaggaggtactgtactgtgtaacgtgtacaatgttcataaaagaaa
ttaatgaacaaataaatatcctctgatggacaagctggtaagaatgtagc
ttgcaaagatagatagatagatatatagatagatagatatatagatagat
agatagataagtaaataagtaaataaataagtaaataaataaataaataa
ataaataaataaataataaaccttttctgctttagtggcaaaggatggct
cagaggacatttctttgaatagtgtgcttggtctcacagagattaaatgc
ttagaagagaaatctcagttcttgactgataagtataccaggacaaatct
gtgctgttcacacaaagtctggctgatggtaaggacagggctaggcctat
ttcttatctctggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_143234448_143235079
seq2: B6Ng01-103B22.b_44_675

seq1  GAATTCTTTTAGCAAAGATCTTTTTCTTTGTTGTTTTTTTAAATAGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAGCAAAGATCTTTTTCTTTGTTGTTTTTTTAAATAGACAC  50

seq1  ATTATTGTTTTAGAAAGACTTTACACTGACAACAAAATTAATGGAAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTTTTAGAAAGACTTTACACTGACAACAAAATTAATGGAAAGCT  100

seq1  AACAATTTTTTTTCATTTATCTCCTTACATGTGTGCAGTCTCACTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTTTTTTCATTTATCTCCTTACATGTGTGCAGTCTCACTAATGA  150

seq1  TCCGCATGCCCCTCAGAAATACACATTTGTAAGATTGGTGAACTTCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCATGCCCCTCAGAAATACACATTTGTAAGATTGGTGAACTTCCACC  200

seq1  AACACATAGCCATCACTCTAAGTTAACAGTTTACACCAAGGTTAACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAGCCATCACTCTAAGTTAACAGTTTACACCAAGGTTAACTTTT  250

seq1  GGTAATGCACATGCTATGGGTTTTTATGTTATTTCTACTTGTATTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGCACATGCTATGGGTTTTTATGTTATTTCTACTTGTATTTTTAT  300

seq1  TATTTTCATTAATTTATTTATTTACTTCACATCTGACTATCAGTCCCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATTAATTTATTTATTTACTTCACATCTGACTATCAGTCCCCTG  350

seq1  CTTCCAGTACTCTCTCACACAGATCTTTCTCCTCTCTCCCCACCCCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTACTCTCTCACACAGATCTTTCTCCTCTCTCCCCACCCCTCCC  400

seq1  TTTCCTCTGAGAAAGGGAAGCTTTCCCCACCCCACCCTTGGGTATCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTGAGAAAGGGAAGCTTTCCCCACCCCACCCTTGGGTATCCCCC  450

seq1  TACTATGGCACATCATGTCACAGCAGGACATGGTACATCCTTTTCCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGGCACATCATGTCACAGCAGGACATGGTACATCCTTTTCCATTG  500

seq1  AGGCCAGACATGGTAGCCCAGTTAGGGGAACAGGATCCACAGGCAGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGACATGGTAGCCCAGTTAGGGGAACAGGATCCACAGGCAGGCAA  550

seq1  CAGTTTCAGCTACAGTTGTTGGGGTAACCGCATGAAGACCAAATTACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGTTTCAGCTACAGTTGTTGGGGTAACCGCATGAAGACCAAATTACACT  600

seq1  TCTGCTACATATATGTGTTGGGGGGGATAGGA  632
      ||||||||||||||||||||||||||| ||||
seq2  TCTGCTACATATATGTGTTGGGGGGGAAAGGA  632

seq1: chr3_143392149_143393274
seq2: B6Ng01-103B22.g_66_1180 (reverse)

seq1  TACCAGAAGATAAGAGAATA-GCCTAGCCCTGTCCCCTCACCATCAG-CA  48
      |||||| |||||||| |||| ||||||||||||  ||| |||||||| ||
seq2  TACCAG-AGATAAGA-AATAGGCCTAGCCCTGT--CCTTACCATCAGCCA  46

seq1  GAC-TTGTGTGGACAGCCACAAGGATTTGGTTCCTGGTATAACTTATCAG  97
      ||| ||||||| |||| ||||  ||||||  ||||||||| |||||||| 
seq2  GACTTTGTGTGAACAG-CACA--GATTTG--TCCTGGTAT-ACTTATCA-  89

seq1  GTCAGGAACTGAGATTTCTC-TCTAAGCATTTAATCTCTGTGAGACCAAG  146
      |||| ||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTCAAGAACTGAGATTTCTCTTCTAAGCATTTAATCTCTGTGAGACCAAG  139

seq1  CACACTATTCAAAGAAATGTCCCCTCTGAGCCATCCTTTGCCACTAAAGC  196
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  CACACTATTCAAAGAAATGT--CCTCTGAGCCATCCTTTGCCACTAAAGC  187

seq1  AGAAAAGGTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAC  246
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGTTT--ATTATTTATTTATTTATTTATTTATTTATTTATTTAC  235

seq1  TTATTTATTTACTTATTTACTTATCTATCTATCTATCTATATATCTATCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTACTTATTTACTTATCTATCTATCTATCTATATATCTATCT  285

seq1  ATCTATATATCTATCTATCTATCTTTGCAAGCTACATTCTTACCAGCTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATATCTATCTATCTATCTTTGCAAGCTACATTCTTACCAGCTTG  335

seq1  TCCATCAGAGGATATTTATTTGTTCATTAATTTCTTTTATGAACATTGTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGAGGATATTTATTTGTTCATTAATTTCTTTTATGAACATTGTA  385

seq1  CACGTTACACAGTACAGTACCTCCTGATCATTTATAGGCCAGATTTATAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTACACAGTACAGTACCTCCTGATCATTTATAGGCCAGATTTATAC  435

seq1  CCCGTGACTTGATGGAAGGCACAGTGCAGGATAGCAACTGTCCCTTTCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGACTTGATGGAAGGCACAGTGCAGGATAGCAACTGTCCCTTTCTC  485

seq1  TGTGTAAGCAGCCACGGCACGATGTGCAGCATGAGGAGTCTCCTTTTAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGCAGCCACGGCACGATGTGCAGCATGAGGAGTCTCCTTTTAGA  535

seq1  CACTGCAATTATCACTTGTCTTATTTATGCATCTCTCTTAACATTGTGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAATTATCACTTGTCTTATTTATGCATCTCTCTTAACATTGTGTT  585

seq1  CCCTTTACAAATACTTTTATTTAAAATGGCACGCAAGGAAACAGTTCAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTACAAATACTTTTATTTAAAATGGCACGCAAGGAAACAGTTCAGC  635

seq1  ATGTCTGAAGTTTGGGGGCTGGGGAAGAGAAAGAAGAAGTAAGCCTCGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGAAGTTTGGGGGCTGGGGAAGAGAAAGAAGAAGTAAGCCTCGGA  685

seq1  CAATTCCATCCGTTAAAAACCACAGTCCACCAAAAAAAAAAAAAAATAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCATCCGTTAAAAACCACAGTCCACCAAAAAAAAAAAAAAATAAT  735

seq1  AAAGTTAAATTAGCATTATATTTCCTAATGTCTTGGTACCGTTGTTAGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAAATTAGCATTATATTTCCTAATGTCTTGGTACCGTTGTTAGTG  785

seq1  CTTACTGTTTCCTAAAGAATATTCAAAAGGTATTTTTTCCAGTAGACCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTTTCCTAAAGAATATTCAAAAGGTATTTTTTCCAGTAGACCAA  835

seq1  TTCCTTTTAGGCACACCCTGGAAATGCCTTGCTTATTTTAAATAGGCCCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTAGGCACACCCTGGAAATGCCTTGCTTATTTTAAATAGGCCCA  885

seq1  TTATGCTCTCAGACACCTACATAACTAGCAAGTCCAGCCTTAATAAAGTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTCTCAGACACCTACATAACTAGCAAGTCCAGCCTTAATAAAGTG  935

seq1  ACTGGGCTGTATGCTTTCCTTGCTCTGTCATTTATTTTGTCTTCTCCAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTGTATGCTTTCCTTGCTCTGTCATTTATTTTGTCTTCTCCAAC  985

seq1  TCTCCTTTCAAACAATTCACAGTTACCAAAAGATTTATTAAATTCCTCAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTCAAACAATTCACAGTTACCAAAAGATTTATTAAATTCCTCAC  1035

seq1  CCAAGTTTCCCGGAGTAAATGCAAACTGAAATTCTGCCTCTAGCAGAGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTTCCCGGAGTAAATGCAAACTGAAATTCTGCCTCTAGCAGAGCA  1085

seq1  AGAAGCAGTGACTCAAAAGCTGTAGAATTC  1126
      ||||||||||||||||||||||||||||||
seq2  AGAAGCAGTGACTCAAAAGCTGTAGAATTC  1115