BAC Information

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BAC

Clone NameB6Ng01-103E22
Chromosome3 (Build37)
Map Location 41,059,227 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103E22.bB6Ng01-103E22.g
ACCDH911937DH911938
length9671,170
definitionDH911937|Mus musculus domesticus DNA, BAC clone: B6Ng01-103E22, 5' end.DH911938|Mus musculus domesticus DNA, BAC clone: B6Ng01-103E22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagttacattttttaatggggttatttgatt
ttttggagtccagcttcttgacctctttgtatatattggatattagtcca
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgttgccttacagaagctttgcaattttatgagatcccatttttcta
ttctcgatcttacagcacaagccattgctgttctagtcaggaatttttcc
cctgtgcccatatctttgaggcttttccccattttctcctctatcagttt
cattgtctctggttttatgtggagtcccataatccacttagattttacct
tagtacaaggagataggaatggatcaattcaaattcttctacatgataac
caccagttgtgccagcaccatttgttgaaaatgctgtcatttttccactg
aatggttttagcttccttgtcaatgatcaagtgaccataggtgtgcaggt
tcatctctgggtctttaattctattcaattggtctacttctctgtctcta
tatcagtatcatgcagtttttaatcacaattgctctgtagtacagcttta
ggtcaggcatggtgattccaccagaggttcttttacccttgagaaaagtt
tttgctatcctaggttttttgttattccaggtgaatttgcagatcactct
ttccaattcattgaggaattgagttggagttttgatggggattgtgttga
atctgtagattgcttttggcaagatagacatttttactataatgattctg
ccagtccatgagcatgggagatctttccatcttctgagatcttgtttaat
ttctttcttcagagacttgaagttattatcatacagatcttcacttcctt
aggtagagtcacatcaaggtattttatattttttgtgactattgagaagg
tgtgtttccctagttct
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagagagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaggagctaaagggatctgcacccta
tagtgaacacattatgagctaccagtaccccggagcttttgactctagct
gcattatatatccaaagatgcttagtcgcatcacttgaagagagcccttg
actgccacctttattggcctcagtacaggaattcatggcaaaagggagat
gggttggccgagtgatgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059227_41059737
seq2: B6Ng01-103E22.b_43_536 (reverse)

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  50
      ||||||||||||||||||||| | ||||||| |||||||||||| |||||
seq2  CACACCTATGGTCACTTGATCATTGACAAGGAAGCTAAAACCATTCAGTG  50

seq1  GAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTAT  100
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAAAATGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTAT  100

seq1  CATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTC  150
      |||||||||||||  ||||||||||| |||||||||||||||||||||| 
seq2  CATGTAGAAGAATTTGAATTGATCCATTCCTATCTCCTTGTACTAAGGTA  150

seq1  AAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACT  200
      |||||||||||||| | || || ||||||||||||||||||| |||||||
seq2  AAATCTAAGTGGATTATGGGACTCCACATAAAACCAGAGACAATGAAACT  200

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAA  250
       |||||||||||| |||||||||||||  ||||||||| |||||||||||
seq2  GATAGAGGAGAAAATGGGGAAAAGCCTCAAAGATATGGGCACAGGGGAAA  250

seq1  AATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGAC  300
      ||||||||  ||||||||||||||||||||||||||||| ||||||||| 
seq2  AATTCCTGACTAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATAGAA  300

seq1  AAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGT  350
      |||||||| ||||| ||| ||||||||||||| ||||||           
seq2  AAATGGGATCTCATAAAATTGCAAAGCTTCTGTAAGGCA-----------  339

seq1  CAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATC  399
             ||||||||| |||||||||||||||||||||||||||||||||
seq2  -------ACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATC  382

seq1  CTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAG  449
      ||||||||||||| ||||||||||||||||||||  ||||  ||||||||
seq2  CTAAATCAGATAGTGGACTAATATCCAATATATACAAAGAGGTCAAGAAG  432

seq1  GTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCT  499
       |||| |||| |||||||||||||||||||||||||||   |||||||||
seq2  CTGGACTCCAAAAAATCAAATAACCCCATTAAAAAATGTAACTCAGAGCT  482

seq1  AAACAAAGAATT  511
      ||||||||||||
seq2  AAACAAAGAATT  494