BAC Information

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BAC

Clone NameB6Ng01-105K21
Chromosome3 (Build37)
Map Location 11,461,948 - 11,463,021
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670564, LOC383826, EG667978
Downstream geneLOC667999, EG621965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105K21.bB6Ng01-105K21.g
ACCDH913634DH913635
length1,0871,122
definitionDH913634|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K21, 5' end.DH913635|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttccgagtgttcccaatgcaaagtgagcagtatatggacat
gcatttgttcaacattggccattcccaatgtgttcacctatacagaggtg
gacatgaagggaatgaagaaactgccctatttatgtgaatcgtacataag
actgtataaaagatgcctttgtggagtacaaggcaccctcagaattcata
taacatcagcctctctgatgatgtattgtaccagtatttatttggtgata
gtggcatcagtgatgtggttagtaggagctttggtattcagttgattaga
gatatagatccatctttaggtgctgggtgctaatggactcttcagagagt
gtaactcaggaaggtggttcctgaaccccataaagaatggaaaggcagca
gggagaaaacacttccaaactcatatttttaatatgagtcaatattttta
atcgaccatacttccatattatctagtgataaagagtggtaaaggaacac
ttttctttcttatttattgaatatcaagtttgcatagttatacaagttca
ttgttatagctatttaagtttattacactagatatccctttctcttcagc
atcctctgtgacttaccttcattcatctagaaagttttattgctagtttc
atgccttatatgaatacataatattatatacctgtatacaatctaggatg
tagagttgaaagaaaatgtgatatttttcatcctgtgacttaatttactt
tgtatgattatctgcaatgtaatcaattttcttagaaaaaaacatattct
gttatgtctttatagttacataaaatttcattgagtgctcacacatttgc
ttttttgtattcatcttctggtgaatacagcttttggatgaataatattg
tggatagtgctgtaataaacatttatatgcaagtgtgtctatgataggct
gattgaaactctaatgggcttctcagaaaataggcattaatcaccagagc
cacaccaacaatcctattcgtagaattttggagccaattggctatgggtg
aattgatttacatggaaccaacagcaatgtgaaaatg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgtttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttgggtgattcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagagc
ttttagatgtgtgtcaagctgctagtatgtgcttctctcccgttttttct
tgaaagcactcatagctatgagtttccttctaagaaagctttcattgtgt
gccctaaggttggggtacgctgtggctctattttcataaacttaaaatgt
tataatctctcttagtcctctgaccacggactcttgttagaagagatgta
cgtatctccgcggacgggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_11461948_11463021
seq2: B6Ng01-105K21.b_46_1132

seq1  GAATTCATCTTCCGAGTGTTCCCAATGCAAAGTGAGCAGTATATGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTCCGAGTGTTCCCAATGCAAAGTGAGCAGTATATGGACAT  50

seq1  GCATTTGTTCAACATTGGCCATTCCCAATGTGTTCACCTATACAGAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTTCAACATTGGCCATTCCCAATGTGTTCACCTATACAGAGGTG  100

seq1  GACATGAAGGGAATGAAGAAACTGCCCTATTTATGTGAATCGTACATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAAGGGAATGAAGAAACTGCCCTATTTATGTGAATCGTACATAAG  150

seq1  ACTGTATAAAAGATGCCTTTGTGGAGTACAAGGCACCCTCAGAATTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATAAAAGATGCCTTTGTGGAGTACAAGGCACCCTCAGAATTCATA  200

seq1  TAACATCAGCCTCTCTGATGATGTATTGTACCAGTATTTATTTGGTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCAGCCTCTCTGATGATGTATTGTACCAGTATTTATTTGGTGATA  250

seq1  GTGGCATCAGTGATGTGGTTAGTAGGAGCTTTGGTATTCAGTTGATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATCAGTGATGTGGTTAGTAGGAGCTTTGGTATTCAGTTGATTAGA  300

seq1  GATATAGATCCATCTTTAGGTGCTGGGTGCTAATGGACTCTTCAGAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGATCCATCTTTAGGTGCTGGGTGCTAATGGACTCTTCAGAGAGT  350

seq1  GTAACTCAGGAAGGTGGTTCCTGAACCCCATAAAGAATGGAAAGGCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCAGGAAGGTGGTTCCTGAACCCCATAAAGAATGGAAAGGCAGCA  400

seq1  GGGAGAAAACACTTCCAAACTCATATTTTTAATATGAGTCAATATTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAACACTTCCAAACTCATATTTTTAATATGAGTCAATATTTTTA  450

seq1  ATCGACCATACTTCCATATTATCTAGTGATAAAGAGTGGTAAAGGAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACCATACTTCCATATTATCTAGTGATAAAGAGTGGTAAAGGAACAC  500

seq1  TTTTCTTTCTTATTTATTGAATATCAAGTTTGCATAGTTATACAAGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTTATTTATTGAATATCAAGTTTGCATAGTTATACAAGTTCA  550

seq1  TTGTTATAGCTATTTAAGTTTATTACACTAGATATCCCTTTCTCTTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATAGCTATTTAAGTTTATTACACTAGATATCCCTTTCTCTTCAGC  600

seq1  ATCCTCTGTGACTTACCTTCATTCATCTAGAAAGTTTTATTGCTAGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGTGACTTACCTTCATTCATCTAGAAAGTTTTATTGCTAGTTTC  650

seq1  ATGCCTTATATGAATACATAATATTATATACCTGTATACAATCTAGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTATATGAATACATAATATTATATACCTGTATACAATCTAGGATG  700

seq1  TAGAGTTGAAAGAAAATGTGATATTTTTCATCCTGTGACTTAATTTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTGAAAGAAAATGTGATATTTTTCATCCTGTGACTTAATTTACTT  750

seq1  TGTATGATTATCTGCAATGTAATCAATTTTCTTAGAAAAAAACATATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATTATCTGCAATGTAATCAATTTTCTTAGAAAAAAACATATTCT  800

seq1  GTTATGTCTTTATAGTTACATAAAATTTCATTGAGTGCTCACACATTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTCTTTATAGTTACATAAAATTTCATTGAGTGCTCACACATTTGC  850

seq1  TTTTTTGTATTCATCTTCTGGTGAATACAGCTTTTGGATGAATAATATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTATTCATCTTCTGGTGAATACAGCTTTTGGATGAATAATATTG  900

seq1  TGGATAGTGCTGTAATAAACATTTATATGCAAGTGTGTCTATGATAGGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGTGCTGTAATAAACATTTATATGCAAGTGTGTCTATGATAGGCT  950

seq1  GATTGAAACTCTAAT-GGCTTCTCAG-AAATA-GCATT-ATCA-CAGAGC  995
      ||||||||||||||| |||||||||| ||||| ||||| |||| ||||||
seq2  GATTGAAACTCTAATGGGCTTCTCAGAAAATAGGCATTAATCACCAGAGC  1000

seq1  CACA-CAACAATTCTATTTTTAG-ATATTTGAG-CAATT-GCTAT-GGTG  1040
      |||| ||||||| |||||  ||| || || ||| ||||| ||||| ||||
seq2  CACACCAACAATCCTATTCGTAGAATTTTGGAGCCAATTGGCTATGGGTG  1050

seq1  ATTTGATTTACATG--ACCAACAGCAATGT-AAAATG  1074
      | ||||||||||||  |||||||||||||| ||||||
seq2  AATTGATTTACATGGAACCAACAGCAATGTGAAAATG  1087