BAC Information

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BAC

Clone NameB6Ng01-107D04
Chromosome3 (Build37)
Map Location 114,132,537 - 114,133,352
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043688, LOC100043207, Amy1, Rnpc3, Col11a1
Downstream geneLOC100043220, Olfm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107D04.bB6Ng01-107D04.g
ACCDH914729DH914730
length1,174819
definitionDH914729|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D04, 5' end.DH914730|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcctcagggaaatgcaaatcaaaacaacccagacat
tccatttcataccagtcaaactggctaagatcaaaaattcaggtgacagc
agatgctggcgaagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcacagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgtatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatagtagcccagaaac
atggaatacccaagatagaagatacaatttgctaaatgcatgaaactcga
gaagaacgaagaccaacgtatggacactttgctccttcctagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatccagggatccatcccataat
tagcttccaaacgctgacaccattgcatacactagcaagattttgtatac
acagatatagctgtctcttgtgagactatgctggggcccagaaaacacag
aagtggatgttcacagtcagctattggatgggtcacacagcccccaatgg
aggagctaaagaaagtagccaagagctaaagggaactgcaaccctatatg
tggacaatatgactaccagtaccccggagctcttgtctctagctgcatat
gtatcaaagatgcctagtcagccatcactggaaagagaggcccttgactg
caactttatatgccccagtacaggggaacgccagggccaaaagggggtcg
tagtaggggaattgggggaagatt
gaattctttgataaaaacctgcctgcctctgtgcattttcggctaaagag
aagagggagatagaacctgttgagaccacctccagtagattggcatggct
cctggtggagggatggggccacccacccatctcaaaaatttttaacctag
aaatgttcctgtccaaaggaagaacacacacaaaaattggaacagagatt
gaaggtagagccagatggaggctgccctacaatcatgtctgcaaacacca
aacccaacacttgctgtggtcaagaggtgcttgctaacaggaacctagtg
tggctgttccttggaaagtaccgccagcaaccgaccaatgcaaatgtgga
tgcttggagccaaccatcagaaggagctcagggaacctggttgagcaaca
ggcggaaggactggaggagcagaggggaattgcagcacaattggaagaac
agcataggctggcctgaccacccagttctctcagagtctagaccaccaac
caaggagtgtacctggagtgatccatgactccagatacatatgtagcaga
ggatggccttgcctgacagcaatgggagaggaggccattggtcctgtggt
ggtttgatgccccagtgtaaggggatgctggagcagtgggacctgagagt
gtgggtggatgggggagcaccctcatacaggcaagagggaatgggaaggg
aagatttggggatggtggtttggtggaggtggtaaccgggaaaatggggt
atcatttgagatgtaacaatggaaatgattgaaaatatatatcttgtctg
ttccttagtttatatagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114132537_114133352
seq2: B6Ng01-107D04.g_65_883

seq1  GAATTCTTTGATAAAAACCTGCCTGCCTCTGTGCATTTTCGGCTAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATAAAAACCTGCCTGCCTCTGTGCATTTTCGGCTAAAGAG  50

seq1  AAGAGGGAGATAGAACCTGTTGAGACCACCTCCAGTAGATTGGCATGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGATAGAACCTGTTGAGACCACCTCCAGTAGATTGGCATGGCT  100

seq1  CCTGGTGGAGGGATGGGGCCACCCACCCATCTCAAAAATTTTTAACCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGGAGGGATGGGGCCACCCACCCATCTCAAAAATTTTTAACCTAG  150

seq1  AAATGTTCCTGTCCAAAGGAAGAACACACACAAAAATTGGAACAGAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCCTGTCCAAAGGAAGAACACACACAAAAATTGGAACAGAGATT  200

seq1  GAAGGTAGAGCCAGATGGAGGCTGCCCTACAATCATGTCTGCAAACACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAGAGCCAGATGGAGGCTGCCCTACAATCATGTCTGCAAACACCA  250

seq1  AACCCAACACTTGCTGTGGTCAAGAGGTGCTTGCTAACAGGAACCTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACACTTGCTGTGGTCAAGAGGTGCTTGCTAACAGGAACCTAGTG  300

seq1  TGGCTGTTCCTTGGAAAGTACCGCCAGCAACCGACCAATGCAAATGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTCCTTGGAAAGTACCGCCAGCAACCGACCAATGCAAATGTGGA  350

seq1  TGCTTGGAGCCAACCATCAGAAGGAGCTCAGGGAACCTGGTTGAGCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGAGCCAACCATCAGAAGGAGCTCAGGGAACCTGGTTGAGCAACA  400

seq1  GGCGGAAGGACTGGAGGAGCAGAGGGGAATTGCAGCACAATTGGAAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGAAGGACTGGAGGAGCAGAGGGGAATTGCAGCACAATTGGAAGAAC  450

seq1  AGCATAGGCTGGCCTGACCACCCAGTTCTCTCAGAGTCTAGACCACCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGGCTGGCCTGACCACCCAGTTCTCTCAGAGTCTAGACCACCAAC  500

seq1  CAAGGAGTGTACCTGGAGTGATCCATGACTCCAGATACATATGTAGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGTGTACCTGGAGTGATCCATGACTCCAGATACATATGTAGCAGA  550

seq1  GGATGGCCTTGCCTGACAGCAATGGGAGAGGAGGCCATTGGTCCTGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCCTTGCCTGACAGCAATGGGAGAGGAGGCCATTGGTCCTGTGGT  600

seq1  GGTTTGATGCCCCAGTGTAAGGGGATGCTGGAGCAGTGGGACCTGAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGATGCCCCAGTGTAAGGGGATGCTGGAGCAGTGGGACCTGAGAGT  650

seq1  GTGGGTGGATGGGGGAGCACCCTCATACAGGCAAGAGGGAATGGGAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGATGGGGGAGCACCCTCATACAGGCAAGAGGGAATGGGAAGGG  700

seq1  AAGATTT-GGGATGGTGGTTTGGTGGAGGTGGTAACCGGG-AAATGGGGT  748
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  AAGATTTGGGGATGGTGGTTTGGTGGAGGTGGTAACCGGGAAAATGGGGT  750

seq1  ATCATTTGAGATGTAAACAAATGGAATGATTGAAA--AAAAAACCTGTCT  796
      |||||||||||||| |||||  | |||||||||||  | | | | |||||
seq2  ATCATTTGAGATGT-AACAATGGAAATGATTGAAAATATATATCTTGTCT  799

seq1  GTCCCTTAGTTTATATAGAA  816
      || |||||||||||||||||
seq2  GTTCCTTAGTTTATATAGAA  819