BAC Information

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BAC

Clone NameB6Ng01-108F16
Chromosome3 (Build37)
Map Location 79,427,220 - 79,428,187
singlet/doubletsinglet
Overlap geneEtfdh
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid
Downstream gene4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik, EG626797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108F16.bB6Ng01-108F16.g
ACCDH915561DH915562
length1,152962
definitionDH915561|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F16, 5' end.DH915562|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcagttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaca
tagaagtggatgctcacagtcggctattggatggatcacatgggccccaa
tgaaggaactagagaaagtaccaaagaagctaaaggatctgcaccctata
ggtggacacattatgactacaggacccggagctcttgactctagctgcat
atgcatcaaagatgctagtcgcatcactgcagagagtcatgaccacactt
aatggcccagtaaggacgcaggtcataaggggagtgtggtggctcacgga
aa
gaattcaaggtcatcctgttatattcaggagttcaaggtcaggccattac
atgaagtcctgttctaaaagaaacaaatgaacaaccacaaaagttttact
taagcagcaatatgtaacacacttgataaaactgtgatatactggatgct
tttaaattgtcatgaaaaacaaaatattaagaccaacagggtaatataaa
gtatctaggaaagtctcaagagtttatgaaaattgtcgcctaccttccca
tcttttgtctttctcccggggatgaacagtgtagtgagtggtaatctgag
gtacagcagaggttgaagaacatcttggagcacacagaggtaggcacttc
ttaatttttaaggcatgaaaccagtgatacgctgcataaaaatgaaaagt
atctttttaagaattagtttccatctgttgtagactgaaaaatctctaag
ctgaatgagtttctctgtgtagcccaggctgtcctggaactcaatctgta
aaccaggctggcctcgaactcagaaatccacctgcctctgccttccaagt
gctgggattaaaggcaagtgctaccactgcccagctctgaatgaatattc
ttaataattaacacaaatcaaaatggaaaattatttttcttatgagtgat
acagctaacttttgctcatgaagcaaaatttcaactcttttaaatcattt
attttatttttattttatgcattcatgttttgcctgcacacaagtctgtg
tgagggggttggatctctatacttagagtaacagacagttgtgagctgac
atgtgggtgctgggaattgaacctggatcctctggaagagcatcagtgct
cttgactgctgagccatctctccagccccataatgtgtttttgttgtttt
ttttttggtggtgtttaattaagattaattatttaaataggtaatacact
gttgcttgcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79427220_79428187
seq2: B6Ng01-108F16.g_66_1027

seq1  GAATTCAAGGTCATCCTGTTATATTCAGGAGTTCAAGGTCAGGCCATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCATCCTGTTATATTCAGGAGTTCAAGGTCAGGCCATTAC  50

seq1  ATGAAGTCCTGTTCTAAAAGAAACAAATGAACAACCACAAAAGTTTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCCTGTTCTAAAAGAAACAAATGAACAACCACAAAAGTTTTACT  100

seq1  TAAGCAGCAATATGTAACACACTTGATAAAACTGTGATATACTGGATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCAATATGTAACACACTTGATAAAACTGTGATATACTGGATGCT  150

seq1  TTTAAATTGTCATGAAAAACAAAATATTAAGACCAACAGGGTAATATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTGTCATGAAAAACAAAATATTAAGACCAACAGGGTAATATAAA  200

seq1  GTATCTAGGAAAGTCTCAAGAGTTTATGAAAATTGTCGCCTACCTTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAGGAAAGTCTCAAGAGTTTATGAAAATTGTCGCCTACCTTCCCA  250

seq1  TCTTTTGTCTTTCTCCCGGGGATGAACAGTGTAGTGAGTGGTAATCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTCTTTCTCCCGGGGATGAACAGTGTAGTGAGTGGTAATCTGAG  300

seq1  GTACAGCAGAGGTTGAAGAACATCTTGGAGCACACAGAGGTAGGCACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCAGAGGTTGAAGAACATCTTGGAGCACACAGAGGTAGGCACTTC  350

seq1  TTAATTTTTAAGGCATGAAACCAGTGATACGCTGCATAAAAATGAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTAAGGCATGAAACCAGTGATACGCTGCATAAAAATGAAAAGT  400

seq1  ATCTTTTTAAGAATTAGTTTCCATCTGTTGTAGACTGAAAAATCTCTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTAAGAATTAGTTTCCATCTGTTGTAGACTGAAAAATCTCTAAG  450

seq1  CTGAATGAGTTTCTCTGTGTAGCCCAGGCTGTCCTGGAACTCAATCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGAGTTTCTCTGTGTAGCCCAGGCTGTCCTGGAACTCAATCTGTA  500

seq1  AACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTTCCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTTCCAAGT  550

seq1  GCTGGGATTAAAGGCAAGTGCTACCACTGCCCAGCTCTGAATGAATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTAAAGGCAAGTGCTACCACTGCCCAGCTCTGAATGAATATTC  600

seq1  TTAATAATTAACACAAATCAAAATGGAAAATTATTTTTCTTATGAGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATTAACACAAATCAAAATGGAAAATTATTTTTCTTATGAGTGAT  650

seq1  ACAGCTAACTTTTGCTCATGAAGCAAAATTTCAACTCTTTTAAATCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAACTTTTGCTCATGAAGCAAAATTTCAACTCTTTTAAATCATTT  700

seq1  ATTTTATTTTTATTTTATGCATTCATGTTTTGCCTGCACACAAGTCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTTATTTTATGCATTCATGTTTTGCCTGCACACAAGTCTGTG  750

seq1  TGAGGGGGTTGGATCCCTATACTTAGAGTAACAGACAGTTGTGAGCTGAC  800
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGTTGGATCTCTATACTTAGAGTAACAGACAGTTGTGAGCTGAC  800

seq1  ATGTGGGTGCTGGGAATTGAACCTGGATCCTCTGGAAGAGCATCAGGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGTGGGTGCTGGGAATTGAACCTGGATCCTCTGGAAGAGCATCA-GTGC  849

seq1  TCTTGACTGCTGAGCCATCTCTCCAGCCCCATAATGTGTTTTTTGTTGTT  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTTGACTGCTGAGCCATCTCTCCAGCCCCATAATGTG-TTTTTGTTGTT  898

seq1  TTTTTTTTTGTTGTTGTTTTATTTAAGATTTATTTATTTTATATATGTAA  950
      |||||||| || ||   |||| |||||||| |||   |||| ||| || |
seq2  TTTTTTTTGGTGGT--GTTTAATTAAGATTAATT--ATTTAAATAGGT-A  943

seq1  ATACACTGTTGC-TGCCTT  968
      |||||||||||| ||||||
seq2  ATACACTGTTGCTTGCCTT  962