BAC Information

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BAC

Clone NameB6Ng01-108G02
Chromosome3 (Build37)
Map Location 137,281,947 - 137,426,136
singlet/doubletdoublet
Overlap geneDdit4l, LOC668874
Upstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862
Downstream geneH2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108G02.bB6Ng01-108G02.g
ACCDH915581DH915582
length1,0981,090
definitionDH915581|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G02, 5' end.DH915582|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,425,020 - 137,426,136)(137,281,947 - 137,283,033)
sequence
gaattctttacaaataggtttggaaagaaaggtaattaattttggcaggg
tatcacttttattggaaaatttttatgtagagtaatttaaaccactcagt
gatttttttttttttttgagtaattatataatgaaagaattcagggagct
taaattccaaacctcgaagaaaaaaaaaaaaggcatttttcttttggctt
aattggaccatatgacttcctaagatcagcatgagttcacctgacattac
tcttccactgtgattcatctatgggtaggaaatcatctttccttttctgg
ttttgtgagctgcagtttcactggggagccaagaagcattgaacagagtg
aagttaatcttttaagttcttcatgcactcagcacagcagaatgcacgta
tacagcgcatcgcctatcacgggtgaggtgctcggcagggtactggctca
ttacagagagcaagaaaagcaatcgtcagcagtgtaaacagataacaacc
gactcagccaggaaatcagccagcaaatcaatactgatttccagagactt
ctagtgccgggaagaaaataacagcacacaatggaacacactgcagcttc
ctcatttctgaaatgagtgcttttctcgccgttgcaaagatacctgtgac
tcctgctgttatcgcttgtcttggggttcagtaataatttgatgatatta
ttaggcacggcatttgtgcccagcttcctgttaagtgttatctgcagcat
ctcattccatcttcatccctctccaaggagcagtggtgggagtgtctacg
gtgttcatgtttgcacgctgaagttcagggtcattgcttctcagtttctg
gttaagatcaatgtggaaaggtttatgttagcccaggccacatgggcctg
aaagcaggcctgacatcaagatataatttgtgatagcctggaaatgtgcc
ctttgatcagtatgatggtatagtatagtatttacatggactatgattga
tgaaatgtgagtctggaagatggctcagtgttaggagcacttgctgctct
tctagatgtcctgatggtctaagcatcattgtcagctcattgcactta
gaattccaggtaaagtgtatatgacaagggtcttctcaaattggagactt
tgaacagttttaagatgcatccctagaaaaatatgtgacctcctccatgt
ttctggttgacactgtctgatactagtcacctgaattgtaaacccttcca
tagttcaataagggaacacagatcttgcatgcatgtaattaaacacttca
cattttcttatttagagataatatgtgtcattgtttatgaccagaataaa
accatacaactattttgagacacaaatcactatggtaacagtttttctga
ttaagtttgaagttgcactgccttctgctactgaaagatacagcttttaa
cagcaggtattgggtatcttttatattaggccttgtttggttttatacca
ggtaaaacttcatgttaacttaactagtgtgaatattacaatattcaata
actcatactgcatgcagagccatttaaaggaaatcttactggtttgagct
ttttcaaagacaaatgaaaaaaatgatatctagattgatatcaatagaag
gaaaaacattaaaaactagaattctacaatcaataattttaatagtatat
aaatttcatttatttctataaaatgtttcttgaattaataaaagttaaca
caggtaactgtgtatcaccttgggaatttttaatctttattgcattggta
tactgggtaccatggtgcacgaatgggcatcagaggacagcttgtgtggg
tgggttacccttttatactgtgtcggtcctagggattacactaaggtctt
ctcacttgacagcaagggtcttttactctcagagtcatcataccatccca
gtactttatagtgtataattttcttatataaacatcaggtcttctacctg
gttgcctacacagtggtgagttgtattctaatatttctttaattttctta
ttcagtggcaaatggtttccagacattttgcaaacaattgaagaccataa
attttcttctactctagcacacttcaagagactgtagagctagagttcag
aaacaagtagacagcaataatgatatatgttccctcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137425020_137426136
seq2: B6Ng01-108G02.b_44_1141 (reverse)

seq1  TAAGTGCAATGAGCTGACATATGGATGCTAGGAACCCAATACAGGCCATC  50
      ||||||||||||||||||| || ||||||  ||  |||   |||| ||||
seq2  TAAGTGCAATGAGCTGACA-AT-GATGCTTAGA--CCA--TCAGGACATC  44

seq1  TAGAAGAGCAGCAAGTGCTCCTAACCACTGAGCCATCTTTCCAGACTCAC  100
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TAGAAGAGCAGCAAGTGCTCCTAA-CACTGAGCCATC-TTCCAGACTCAC  92

seq1  ATTTTCAATTCATACATAGTTCCATGTAAATACTATAACTATTACAATCA  150
      | |||||  |||  ||||| |||||||||||||||| |||| ||| ||||
seq2  A-TTTCA--TCAATCATAG-TCCATGTAAATACTAT-ACTA-TACCATCA  136

seq1  TTACTGAATCAAAGGGCACAATTCCAGGCTATCACAAATTATATCTTGAT  200
       ||||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  -TACTG-ATCAAAGGGCACATTTCCAGGCTATCACAAATTATATCTTGAT  184

seq1  GTCAGCCCTGCTTTTTCAGG-CCATGTGGCCTGGGCTAACATAAACCTTT  249
      ||||| |||||  ||||||| |||||||||||||||||||||||||||||
seq2  GTCAGGCCTGC--TTTCAGGCCCATGTGGCCTGGGCTAACATAAACCTTT  232

seq1  CCACATTTGATCTTAACCAGAAACCTGAGAAGCAATGACCCTGAACTTCA  299
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCACA-TTGATCTTAACCAGAAA-CTGAGAAGCAATGACCCTGAACTTCA  280

seq1  GCGTGCAAACATGAACACCGTAGACACTCCCACCACTGCTCCTTGGAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCAAACATGAACACCGTAGACACTCCCACCACTGCTCCTTGGAGAG  330

seq1  GGATGAAGATGGAATGAGATGCTGCAGATAACACTTAACAGGAAGCTGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAGATGGAATGAGATGCTGCAGATAACACTTAACAGGAAGCTGGG  380

seq1  CACAAATGCCGTGCCTAATAATATCATCAAATTATTACTGAACCCCAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGCCGTGCCTAATAATATCATCAAATTATTACTGAACCCCAAGA  430

seq1  CAAGCGATAACAGCAGGAGTCACAGGTATCTTTGCAACGGCGAGAAAAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGATAACAGCAGGAGTCACAGGTATCTTTGCAACGGCGAGAAAAGC  480

seq1  ACTCATTTCAGAAATGAGGAAGCTGCAGTGTGTTCCATTGTGTGCTGTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTCAGAAATGAGGAAGCTGCAGTGTGTTCCATTGTGTGCTGTTA  530

seq1  TTTTCTTCCCGGCACTAGAAGTCTCTGGAAATCAGTATTGATTTGCTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCCGGCACTAGAAGTCTCTGGAAATCAGTATTGATTTGCTGGC  580

seq1  TGATTTCCTGGCTGAGTCGGTTGTTATCTGTTTACACTGCTGACGATTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTGGCTGAGTCGGTTGTTATCTGTTTACACTGCTGACGATTGC  630

seq1  TTTTCTTGCTCTCTGTAATGAGCCAGTACCCTGCCGAGCACCTCACCCGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGCTCTCTGTAATGAGCCAGTACCCTGCCGAGCACCTCACCCGT  680

seq1  GATAGGCGATGCGCTGTATACGTGCATTCTGCTGTGCTGAGTGCATGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCGATGCGCTGTATACGTGCATTCTGCTGTGCTGAGTGCATGAAG  730

seq1  AACTTAAAAGATTAACTTCACTCTGTTCAATGCTTCTTGGCTCCCCAGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAAAGATTAACTTCACTCTGTTCAATGCTTCTTGGCTCCCCAGTG  780

seq1  AAACTGCAGCTCACAAAACCAGAAAAGGAAAGATGATTTCCTACCCATAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAGCTCACAAAACCAGAAAAGGAAAGATGATTTCCTACCCATAG  830

seq1  ATGAATCACAGTGGAAGAGTAATGTCAGGTGAACTCATGCTGATCTTAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCACAGTGGAAGAGTAATGTCAGGTGAACTCATGCTGATCTTAGG  880

seq1  AAGTCATATGGTCCAATTAAGCCAAAAGAAAAATGCCTTTTTTTTTTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATATGGTCCAATTAAGCCAAAAGAAAAATGCCTTTTTTTTTTTTC  930

seq1  TTCGAGGTTTGGAATTTAAGCTCCCTGAATTCTTTCATTATATAATTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGTTTGGAATTTAAGCTCCCTGAATTCTTTCATTATATAATTACT  980

seq1  CAAAAAAAAAAAAAAATCACTGAGTGGTTTAAATTACTCTACATAAAAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAATCACTGAGTGGTTTAAATTACTCTACATAAAAAT  1030

seq1  TTTCCAATAAAAGTGATACCCTGCCAAAATTAATTACCTTTCTTTCCAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATAAAAGTGATACCCTGCCAAAATTAATTACCTTTCTTTCCAAA  1080

seq1  CCTATTTGTAAAGAATTC  1117
      ||||||||||||||||||
seq2  CCTATTTGTAAAGAATTC  1098

seq1: chr3_137281947_137283033
seq2: B6Ng01-108G02.g_68_1157

seq1  GAATTCCAGGTAAAGTGTATATGACAAGGGTCTTCTCAAATTGGAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTAAAGTGTATATGACAAGGGTCTTCTCAAATTGGAGACTT  50

seq1  TGAACAGTTTTAAGATGCATCCCTAGAAAAATATGTGACCTCCTCCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGTTTTAAGATGCATCCCTAGAAAAATATGTGACCTCCTCCATGT  100

seq1  TTCTGGTTGACACTGTCTGATACTAGTCACCTGAATTGTAAACCCTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTGACACTGTCTGATACTAGTCACCTGAATTGTAAACCCTTCCA  150

seq1  TAGTTCAATAAGGGAACACAGATCTTGCATGCATGTAATTAAACACTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAATAAGGGAACACAGATCTTGCATGCATGTAATTAAACACTTCA  200

seq1  CATTTTCTTATTTAGAGATAATATGTGTCATTGTTTATGACCAGAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTATTTAGAGATAATATGTGTCATTGTTTATGACCAGAATAAA  250

seq1  ACCATACAACTATTTTGAGACACAAATCACTATGGTAACAGTTTTTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACAACTATTTTGAGACACAAATCACTATGGTAACAGTTTTTCTGA  300

seq1  TTAAGTTTGAAGTTGCACTGCCTTCTGCTACTGAAAGATACAGCTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTGAAGTTGCACTGCCTTCTGCTACTGAAAGATACAGCTTTTAA  350

seq1  CAGCAGGTATTGGGTATCTTTTATATTAGGCCTTGTTTGGTTTTATACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGTATTGGGTATCTTTTATATTAGGCCTTGTTTGGTTTTATACCA  400

seq1  GGTAAAACTTCATGTTAACTTAACTAGTGTGAATATTACAATATTCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAACTTCATGTTAACTTAACTAGTGTGAATATTACAATATTCAATA  450

seq1  ACTCATACTGCATGCAGAGCCATTTAAAGGAAATCTTACTGGTTTGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATACTGCATGCAGAGCCATTTAAAGGAAATCTTACTGGTTTGAGCT  500

seq1  TTTTCAAAGACAAATGAAAAAAATGATATCTAGATTGATATCAATAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGACAAATGAAAAAAATGATATCTAGATTGATATCAATAGAAG  550

seq1  GAAAAACATTAAAAACTAGAATTCTACAATCAATAATTTTAATAGTATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACATTAAAAACTAGAATTCTACAATCAATAATTTTAATAGTATAT  600

seq1  AAATTTCATTTATTTCTATAAAATGTTTCTTGAATTAATAAAAGTTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATTTATTTCTATAAAATGTTTCTTGAATTAATAAAAGTTAACA  650

seq1  CAGGTAACTGTGTATCACCTTGGGAATTTTTAATCTTTATTGCATTGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAACTGTGTATCACCTTGGGAATTTTTAATCTTTATTGCATTGGTA  700

seq1  TACTGGGTACCATGGTGCACGAATGGGCATCAGAGGACAGCTTGTGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGTACCATGGTGCACGAATGGGCATCAGAGGACAGCTTGTGTGGG  750

seq1  TGGGTTACCCTTTTATACTGTGTCGGTCCTAGGGATTACACTAAGGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTACCCTTTTATACTGTGTCGGTCCTAGGGATTACACTAAGGTCTT  800

seq1  CTCACTTGACAGCAAGGGTC-TTTACCCTCAGAGTCATCATACCATCCCA  849
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  CTCACTTGACAGCAAGGGTCTTTTACTCTCAGAGTCATCATACCATCCCA  850

seq1  GTACTTTATAGTGTATAATTTTCTTATAT-AACATCAGGTCTCCTACCTG  898
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  GTACTTTATAGTGTATAATTTTCTTATATAAACATCAGGTCTTCTACCTG  900

seq1  GTTGCCTACACAGTGGTGAGTTGTATTCTAATATTTCTTTAA-TTTCTTA  947
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTTGCCTACACAGTGGTGAGTTGTATTCTAATATTTCTTTAATTTTCTTA  950

seq1  TTCAGTGGCAAATGGTTTCCAGACATCTTGCAAAC-AGTGAAGACCATAA  996
      |||||||||||||||||||||||||| |||||||| | ||||||||||||
seq2  TTCAGTGGCAAATGGTTTCCAGACATTTTGCAAACAATTGAAGACCATAA  1000

seq1  ATTTCCTTCTACTCTAAGCACACTTCAGGAGAACTGTAGAGCTAGAGTCT  1046
      |||| |||||||||| ||||||||||| ||| |||||||||||||||| |
seq2  ATTTTCTTCTACTCT-AGCACACTTCAAGAG-ACTGTAGAGCTAGAGT-T  1047

seq1  CAG-AACAAGTAGGACAGCAATAATGATA-ATG-TCCCTCACTG  1087
      ||| |||||||| |||||||||||||||| ||| ||||||||||
seq2  CAGAAACAAGTA-GACAGCAATAATGATATATGTTCCCTCACTG  1090