BAC Information

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BAC

Clone NameB6Ng01-108L14
Chromosome3 (Build37)
Map Location 13,137,823 - 13,139,004
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621965, LOC100039798, EG668033, LOC668037
Downstream geneLOC100039823, LOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108L14.bB6Ng01-108L14.g
ACCDH915836DH915837
length1,1591,103
definitionDH915836|Mus musculus domesticus DNA, BAC clone: B6Ng01-108L14, 5' end.DH915837|Mus musculus domesticus DNA, BAC clone: B6Ng01-108L14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcctcttttacatcctttacaagcaatgtattcatgattctc
attttgcctgatatttgataaacctgataatttttttcacagaggttaat
gcctcaaaactagtcacatacttctttatgaaatgtagagaaaagtcctt
taaagaaaagatctacttgggcaatatttatgtaagtatttctggaattt
ccccgttcctggagtaaccagtgcttggaaattacaagactctacaactg
caatataaaaactttcaagaaaaagattaacaatgaattaatttcagagt
ttttcttcacaacacagtgaaagatgtttaagtcaagagcacacctctca
attcacagcctttcatacatacatatatgtacatatgtgtatatataaat
atgaatcatatatttaatcatgtatttaaccctatttccctgcaccatac
ttatagttaaagaatttctatttgttagtatataaaatgcaactagtttc
tattgcttttgcttagctactaaatcattcaaagcatgtttgtaatttat
atagactacagcattatattaatgtaaatctacttatattagtgaacata
ctgttattatcagacttaaggtcattaatatagttttcatcatttttaca
cattaatctatcctcagtgtaattacttaacattattgtataatggggaa
tattcttaataatcaaatgattttaaaagtatgtgcagattaatagttca
taagactttcatagggctgttaagtgcttgaaagctaagcatgaagaact
gagtttaatcataattattcccctaaaaagtgaagaaattgtaatccaaa
ttcttgagaggagaagacaagtggatcctagatattaatagcagccagcc
ttgtctaataagtgagtctatatctcaaagagagttcctttgtcagaaac
aacatggatggaatttaaggaataggacttgaagtacttttagttcccac
actcagacacacatatgtgcacgtacagatcagacatgatgaacaacaca
cacaacacaaacttatatgcatagtatccaaatcaccagcatgccatgca
tgtacagacttataagtgtctggatcaagacatatagctgaacgttcttc
ggaatgctc
gaattctttgttcagctctgagccccattttttaatggggttattcgatt
ttctggagccaaccttcttgagttctttatatatgttggacattagtccc
ctacccgatttgttacaggtaaaggtcctttcccaatctgttggtggtct
ttttgtcttattgacgttgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatatattctcgatcttacagcacaagccattgctgtt
ctattcaggcatatttccactgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctagttttatgtggagttccttaa
tccacttagatttcacctaagtacaaggagataggaatggaccaattctc
attcttctacatgataactaccagttgtgccagcaccatttgttgaaaat
gctgtctttattccactgaatggttttagctcccttatcaaagatcaagt
gaccataggtgtgtgggtcttcaattctgttccattggtctacttgtctg
tcactgtaccagtaccatgcagtttttatcataattgctctgtagtacag
gtttaggtcaggcatggtgattccaccagaggttcttttatccttgagaa
gagtttttgctatcctaggttttttgttattccagatgaatctgctgatt
gctctttctaattcgttgaagaattgagttggaattttgatggggattgc
attgaatctgtagattgcttttggcaagatagccatttttttctatattg
gccctgccaatccactgagcaggggagatctttccatcttctgaggtctt
cttaatttctttccttcagagactgaagttctaatcctacagatctttca
cttctttagtagagtcacgcaaggcatttaatatgaattgtgacttattg
aaaaggtggttgctttccttaatttcttttctcagcctgtttatctttgt
gtacagtagattatagaatggcttacctcagcttgtttctcacaccattg
cctgggaatgtttccagcctttttactctgaggatggcttgtctttctcc
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13137823_13139004
seq2: B6Ng01-108L14.b_48_1206 (reverse)

seq1  GAGCATTTCTGGAAGAAACGTTCTAGCTATATGTTCCTTGGATTCAGACA  50
      ||||||| |  |||| ||||||| ||||||||||  ||| ||| ||||||
seq2  GAGCATTCC--GAAG-AACGTTC-AGCTATATGT--CTT-GATCCAGACA  43

seq1  CTTATTAAAGGTCTGTACATGCATGTGCATGCTTGTGTGGTTTTGTATAC  100
      |||||   | ||||||||||||||| ||||||| ||   | |||| ||||
seq2  CTTAT---AAGTCTGTACATGCATG-GCATGCTGGT---GATTTGGATAC  86

seq1  TAATGCATATAAGTGTGTGTGTGTGTGTGTGTGTGTTCATTCATGTCTGA  150
      | |||||||||||| |||||   ||||||||| |||||| ||||||||||
seq2  T-ATGCATATAAGTTTGTGT---TGTGTGTGT-TGTTCA-TCATGTCTGA  130

seq1  TCTGGTAACGTGCACATATGTGTGTCTGAGTGTGGGAACTAAAAGGTACT  200
      ||||   ||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTG--TACGTGCACATATGTGTGTCTGAGTGTGGGAACTAAAA-GTACT  177

seq1  TCAAGTCCTATTCCTTAAATTCCATCCATGTTGTTTCTGACAAAGGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCTATTCCTTAAATTCCATCCATGTTGTTTCTGACAAAGGAACT  227

seq1  CTCTTTGAGATATAGACTCACTTATTAGACAAGGCTGGCTGCTATTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAGATATAGACTCACTTATTAGACAAGGCTGGCTGCTATTAATA  277

seq1  TCTAGGATCCACTTGTCTTCTCCTCTCAAGAATTTGGATTACAATTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATCCACTTGTCTTCTCCTCTCAAGAATTTGGATTACAATTTCTT  327

seq1  CACTTTTTAGGGGAATAATTATGATTAAACTCAGTTCTTCATGCTTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTAGGGGAATAATTATGATTAAACTCAGTTCTTCATGCTTAGCT  377

seq1  TTCAAGCACTTAACAGCCCTATGAAAGTCTTATGAACTATTAATCTGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCACTTAACAGCCCTATGAAAGTCTTATGAACTATTAATCTGCAC  427

seq1  ATACTTTTAAAATCATTTGATTATTAAGAATATTCCCCATTATACAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTAAAATCATTTGATTATTAAGAATATTCCCCATTATACAATAA  477

seq1  TGTTAAGTAATTACACTGAGGATAGATTAATGTGTAAAAATGATGAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGTAATTACACTGAGGATAGATTAATGTGTAAAAATGATGAAAAC  527

seq1  TATATTAATGACCTTAAGTCTGATAATAACAGTATGTTCACTAATATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAATGACCTTAAGTCTGATAATAACAGTATGTTCACTAATATAAG  577

seq1  TAGATTTACATTAATATAATGCTGTAGTCTATATAAATTACAAACATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTACATTAATATAATGCTGTAGTCTATATAAATTACAAACATGCT  627

seq1  TTGAATGATTTAGTAGCTAAGCAAAAGCAATAGAAACTAGTTGCATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGATTTAGTAGCTAAGCAAAAGCAATAGAAACTAGTTGCATTTTA  677

seq1  TATACTAACAAATAGAAATTCTTTAACTATAAGTATGGTGCAGGGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAACAAATAGAAATTCTTTAACTATAAGTATGGTGCAGGGAAATA  727

seq1  GGGTTAAATACATGATTAAATATATGATTCATATTTATATATACACATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAATACATGATTAAATATATGATTCATATTTATATATACACATAT  777

seq1  GTACATATATGTATGTATGAAAGGCTGTGAATTGAGAGGTGTGCTCTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATATATGTATGTATGAAAGGCTGTGAATTGAGAGGTGTGCTCTTGA  827

seq1  CTTAAACATCTTTCACTGTGTTGTGAAGAAAAACTCTGAAATTAATTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACATCTTTCACTGTGTTGTGAAGAAAAACTCTGAAATTAATTCAT  877

seq1  TGTTAATCTTTTTCTTGAAAGTTTTTATATTGCAGTTGTAGAGTCTTGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCTTTTTCTTGAAAGTTTTTATATTGCAGTTGTAGAGTCTTGTA  927

seq1  ATTTCCAAGCACTGGTTACTCCAGGAACGGGGAAATTCCAGAAATACTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAGCACTGGTTACTCCAGGAACGGGGAAATTCCAGAAATACTTA  977

seq1  CATAAATATTGCCCAAGTAGATCTTTTCTTTAAAGGACTTTTCTCTACAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATATTGCCCAAGTAGATCTTTTCTTTAAAGGACTTTTCTCTACAT  1027

seq1  TTCATAAAGAAGTATGTGACTAGTTTTGAGGCATTAACCTCTGTGAAAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAGAAGTATGTGACTAGTTTTGAGGCATTAACCTCTGTGAAAAA  1077

seq1  AATTATCAGGTTTATCAAATATCAGGCAAAATGAGAATCATGAATACATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAGGTTTATCAAATATCAGGCAAAATGAGAATCATGAATACATT  1127

seq1  GCTTGTAAAGGATGTAAAAGAGGATAGAATTC  1182
      ||||||||||||||||||||||||||||||||
seq2  GCTTGTAAAGGATGTAAAAGAGGATAGAATTC  1159