BAC Information

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BAC

Clone NameB6Ng01-109C15
Chromosome3 (Build37)
Map Location 63,721,764 - 63,722,943
singlet/doubletsinglet
Overlap geneE130311K13Rik
Upstream geneLOC676984, LOC666967, Mme, Plch1, LOC100040836
Downstream geneSlc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109C15.bB6Ng01-109C15.g
ACCDH916145DH916146
length1,1211,159
definitionDH916145|Mus musculus domesticus DNA, BAC clone: B6Ng01-109C15, 5' end.DH916146|Mus musculus domesticus DNA, BAC clone: B6Ng01-109C15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgtggaataccaaatggctgagaagcacctaaaaagatg
ttcaacattcctaatcatcagggaaatgaaagtcaaaataaccttgagat
tctacctcacaccagtcagaatggctaagttcaaaaacgcagatgacagc
agatgctggcgaggatgtggagaaagaggaatactcctccattgctggtg
ggactgcaagttggtacaaccactctgaaaatcagtttgacagttcctca
gaaaattggacatagttctaccagaagaaccagcaatacctctcctgggc
atatacccagaagatgctccaacatgtaataaggacacatgctccactat
gttcataacaaccttatttataatagctagaagctggaaagaacccagat
gttcctaaacagaggaatggattcagaaaatgtggtacatttacacaata
gagtactatgcagctatttttaaaaatgagtttatgaaattcttagacaa
atgtatggatctggagcatatcatcttgaactcaatcacaaaagagcaca
cattatatgcactgactgataaatggatattatcccagaagctcagaatc
cttaaaagggggaacaaaacaaccatggaaagagttacagagacaaagtt
cagagcagagactgaaggaacgaccattcatagactgccccccttgggga
tccatcccataaacaacaagaaaacccagatatggcagatgccaacaaga
gcctgctgacaggagcctgatataattgtcttctgagggcctttgccagt
gcctggcaaatacagaagtggatgctcacaatcatccattggatggagca
caaggtctccaaagaagatagagaaaatacccaaggagctgaagggtctg
aagaccataggaggattatcaaaagaactaaccagtacctccagagctcc
ttggaactaaaccaccaatcaaagaaacacatgtgggatatgtggcccca
gctgtatatgtagctgagatgcctagtgtcataatgggagaagagaccta
gtccctgttgaaggtctatgcccagtattgggaaagccaggtctaggatg
ggagttgattgttgggggaca
gaattcataggaataaagcagatcctgttttatttgttattatttaacaa
agctaggaaaatcaggtattgatagcttcatttaaagtaagtcacgggga
tggagagatggctaagcagtttaagagtgtttgctgatcttggagaggac
tggagttcagctcttaacacccacatagggaggttcagagctgtgggtat
ctccagctctaggaaatccaactccctcttctggtgtctgtctggtgtct
acacacacgtgtgcatacatgtagacatatgtagacatagatatacataa
aaacaaatcctaagaaagcacaacataacaaaacaagcgctcccttcaca
atccagtgaaccacagttggatcctagcacccacgttacagaccagtgtt
tcgtacatacttataactccaacacagaaggatcctgtgcccttttgtag
caggctcatccatgtgcatgcaagtacactcacacacacacactcatgtg
cacataatctcaagcagacagatgcacaaacacacattcacacacgaaca
catatacagtttaaaaaagtaaaccacaattgatgtgaagttaatctata
atttcaaattttataatgtcaaagttcctgggttaaacatggcaatagtt
tataagattctacaaaacaaagtaatccttaggaaaagaaaaaggcttta
atacaaaattaaaaagaaaacattatttctctaggcaagaaaatgtgtgt
tcatgacgacaaaaaagagttatgcacagtttattatatttgtctcagtt
ttaaacattctataagctcattttcttgaaccaaaccaaacaactaagtt
tcagtctcacacattagtagaattcaagcagaagttactgaatcccatag
tgtgcacagcatgggttgttcacataggaaacaatgtgaggatgtgggag
tgaaggtgggctttcgagccagttggttagtctgggcaaaacataccacc
gcttaagtcctacctgtcatggagaccagcatccccaggatgttcagtat
acagagatagtggtatggcatttactttacggctctgtagtgagcacacg
gatatggagagatgaacaatttactgcggaaactccttgtcttttggaag
actggttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63721764_63722943
seq2: B6Ng01-109C15.g_65_1223

seq1  GAATTCATAGGAATAAAGCAGATCCTGTTTTATTTGTTATTATTTAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGAATAAAGCAGATCCTGTTTTATTTGTTATTATTTAACAA  50

seq1  AGCTAGGAAAATCAGGTATTGATAGCTTCATTTAAAGTAAGTCACGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGAAAATCAGGTATTGATAGCTTCATTTAAAGTAAGTCACGGGGA  100

seq1  TGGAGAGATGGCTAAGCAGTTTAAGAGTGTTTGCTGATCTTGGAGAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGATGGCTAAGCAGTTTAAGAGTGTTTGCTGATCTTGGAGAGGAC  150

seq1  TGGAGTTCAGCTCTTAACACCCACATAGGGAGGTTCAGAGCTGTGGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCAGCTCTTAACACCCACATAGGGAGGTTCAGAGCTGTGGGTAT  200

seq1  CTCCAGCTCTAGGAAATCCAACTCCCTCTTCTGGTGTCTGTCTGGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTCTAGGAAATCCAACTCCCTCTTCTGGTGTCTGTCTGGTGTCT  250

seq1  ACACACACGTGTGCATACATGTAGACATATGTAGACATAGATATACATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGTGTGCATACATGTAGACATATGTAGACATAGATATACATAA  300

seq1  AAACAAATCCTAAGAAAGCACAACATAACAAAACAAGCGCTCCCTTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATCCTAAGAAAGCACAACATAACAAAACAAGCGCTCCCTTCACA  350

seq1  ATCCAGTGAACCACAGTTGGATCCTAGCACCCACGTTACAGACCAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGAACCACAGTTGGATCCTAGCACCCACGTTACAGACCAGTGTT  400

seq1  TCGTACATACTTATAACTCCAACACAGAAGGATCCTGTGCCCTTTTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTACATACTTATAACTCCAACACAGAAGGATCCTGTGCCCTTTTGTAG  450

seq1  CAGGCTCATCCATGTGCATGCAAGTACACTCACACACACACACTCATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCATCCATGTGCATGCAAGTACACTCACACACACACACTCATGTG  500

seq1  CACATAATCTCAAGCAGACAGATGCACAAACACACATTCACACACGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATCTCAAGCAGACAGATGCACAAACACACATTCACACACGAACA  550

seq1  CATATACAGTTTAAAAAAGTAAACCACAATTGATGTGAAGTTAATCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACAGTTTAAAAAAGTAAACCACAATTGATGTGAAGTTAATCTATA  600

seq1  ATTTCAAATTTTATAATGTCAAAGTTCCTGGGTTAAACATGGCAATAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATTTTATAATGTCAAAGTTCCTGGGTTAAACATGGCAATAGTT  650

seq1  TATAAGATTCTACAAAACAAAGTAATCCTTAGGAAAAGAAAAAGGCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATTCTACAAAACAAAGTAATCCTTAGGAAAAGAAAAAGGCTTTA  700

seq1  ATACAAAATTAAAAAGAAAACATTATTTCTCTAGGCAAGAAAATGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATTAAAAAGAAAACATTATTTCTCTAGGCAAGAAAATGTGTGT  750

seq1  TCATGACGACAAAAAAGAGTTATGCACAGTTTATTATATTTGTCTCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACGACAAAAAAGAGTTATGCACAGTTTATTATATTTGTCTCAGTT  800

seq1  TTAAACATTCTATAAGCTCATTTTCTTGAACCAAACCAAACAACTAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATTCTATAAGCTCATTTTCTTGAACCAAACCAAACAACTAAGTT  850

seq1  TCAGTCTCACACATTAGTAGAATTCAAGCAGAAGTTACTGAATCCCATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCACACATTAGTAGAATTCAAGCAGAAGTTACTGAATCCCATAG  900

seq1  TGTGCACAGCAT-GGTTGTTCACATAGGAAACAATGTGAGGATGT-GGAG  948
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  TGTGCACAGCATGGGTTGTTCACATAGGAAACAATGTGAGGATGTGGGAG  950

seq1  TGAAGGTGGGCTTTCGAGCCAGTTGGTTAGTCTGGGCAAGACAATCACCA  998
      ||||||||||||||||||||||||||||||||||||||| |||   ||||
seq2  TGAAGGTGGGCTTTCGAGCCAGTTGGTTAGTCTGGGCAAAACA--TACCA  998

seq1  CGGCTTAGAGTCCTACCTGTCATTGAGACCAGCATCCCCACAGGATAGTT  1048
      | ||||| ||||||||||||||| ||||||||||||||  ||||||   |
seq2  CCGCTTA-AGTCCTACCTGTCATGGAGACCAGCATCCC--CAGGAT--GT  1043

seq1  TCAGTATACAAGAAGTAGTGTGTATGGCATTTACTTTTACGGCTTCTGTG  1098
      ||||||||| |||  ||||| ||||||||||||| |||||||| ||||| 
seq2  TCAGTATAC-AGAGATAGTG-GTATGGCATTTAC-TTTACGGC-TCTGT-  1088

seq1  TGTGAGCACACAGGATATTGGAGCAGATGGAGCAGTATTTACCTGCGGAA  1148
       |||||||||| ||||| ||||| |||| || ||  ||||| ||||||||
seq2  AGTGAGCACAC-GGATA-TGGAG-AGAT-GAACA--ATTTA-CTGCGGAA  1131

seq1  ACATCCTTGTTCTTTGTAGAAGACTTTGTTCT  1180
      || |||||||  ||||  |||||| | |||||
seq2  AC-TCCTTGTCTTTTG--GAAGAC-TGGTTCT  1159