BAC Information

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BAC

Clone NameB6Ng01-110K23
Chromosome3 (Build37)
Map Location 16,329,165 - 16,330,179
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110K23.bB6Ng01-110K23.g
ACCDH917239DH917240
length9931,023
definitionDH917239|Mus musculus domesticus DNA, BAC clone: B6Ng01-110K23, 5' end.DH917240|Mus musculus domesticus DNA, BAC clone: B6Ng01-110K23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggaagaatgttgctattcaatgacattcagaattgcctctggt
agtacactatcactttgaataaaaactaggtcactgccctaaacaggaat
ttaccatcatctagaaagaaggaagtttcagacctaaggagaaaccagaa
tagatacttataactatacttataactatagatagatatagagttacacc
catacacacgtatttgcaatggcctaagggaaaggtggactatacaatag
actaaaataggaactatggcaagggcacgaagcccttgaccctggcttct
aagattaagtgaatcttaggtggagctcttgttgatcccagttgttatca
atgaattctatcccaggtggttcctgttagaccttctgtgtttgcattcc
tctgtcttatgtaagaatccagtaacctctttgtaccttgcgggtatgtc
acccaacttccttattgtcttctgtataaaaagtttgatgctcgatttga
caaattacattcagattctacacaagctctcctgtgtgcatctgtctgcc
attccatccaacgctttgccaacctgcaactagagacctgttccacacag
acaaagggatccagagggtctgcggcaaaggaggacaagttttgcagcca
aattgatggaattagaaaatatcatcctggtattttcctgagtttttcta
atgatattttctacttccatcaatttgcctgagttttgcaggcaaaatga
tggaagtagaaaatatcatcctgagtgagataactctatcccaaaagaac
atgcatattatgaactcactgataagtggatattagccaaaaattataga
gtacctaggatacaacccatggactataagaagtgtaacaagcagaaagt
cctaagttaggatgcttcagtgataaaagaaagaaacaatcatgtgagca
gaggagctgggacctgggtgagagtggaaggtgggggggaata
gaattcccatgtttagcacaaataggaatagatcaaacggtaggagagaa
agtagcttggaacttccattgctttactcttcattccacacacatgcttt
atcagttttcttcctgggttcggaaaggttcagaaatattgttgcctgta
attaactacagctttgtttctcatgataatatcaaagatttccagttatt
attagctgatggttttgtcccacaggggagaattatgtagttttcaagac
accctaaaacaatttagttcagaatattatcgttaaaattggccagtttg
aaaaacataataggtcaggcagtcatggagcatgcctttaatcccagcac
ttcagaggcagaggcaggcggatttctgagttcaaggtcagcctgattta
cagagtgagttccaggagatcgagggctacacagaaaaaccctgtcttga
gacaaacaaacaaacaaaaaagaaaaaaaaaagaaagaaaagcttaacag
ttctgtcatttgtcatttatattgcctccgaacactgaaaacaatatgcc
tacactatacacctgcagtctttagtgaaacttcaaagttacagaggaaa
atactgcattgcagctctctgtgtctgcagcaaaactctggtggtattcc
actgcagaggaggagccccaacaaaggcagcccgtttacagctcagctct
gctcagcacatccagctcaagaatacagtgaaaaagggaacttaaaatgc
tttgtgagcttggaaggtagggagagaggctagaaacatagataactaaa
ttgatcagctatgctctttcataatgtatttaaaatttatgtattattgg
gcttatcagaacaataaaattttctcaaattgggcaggttattttatttt
catgtccattttgaagtcaagagatttggtgaaaaagactcacaattaca
gaatatatttgggtgtttctatgagaattgcttgacttttacaagtagtg
accatccccaatttttattgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16329165_16330179
seq2: B6Ng01-110K23.g_67_1089

seq1  GAATTCCCATGTTTAGCACAAATAGGAATAGATCAAACGGTAGGAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGTTTAGCACAAATAGGAATAGATCAAACGGTAGGAGAGAA  50

seq1  AGTAGCTTGGAACTTCCATTGCTTTACTCTTCATTCCACACACATGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTTGGAACTTCCATTGCTTTACTCTTCATTCCACACACATGCTTT  100

seq1  ATCAGTTTTCTTCCTGGGTTCGGAAAGGTTCAGAAATATTGTTGCCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTTCTTCCTGGGTTCGGAAAGGTTCAGAAATATTGTTGCCTGTA  150

seq1  ATTAACTACAGCTTTGTTTCTCATGATAATATCAAAGATTTCCAGTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTACAGCTTTGTTTCTCATGATAATATCAAAGATTTCCAGTTATT  200

seq1  ATTAGCTGATGGTTTTGTCCCACAGGGGAGAATTATGTAGTTTTCAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGATGGTTTTGTCCCACAGGGGAGAATTATGTAGTTTTCAAGAC  250

seq1  ACCCTAAAACAATTTAGTTCAGAATATTATCGTTAAAATTGGCCAGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAAACAATTTAGTTCAGAATATTATCGTTAAAATTGGCCAGTTTG  300

seq1  AAAAACATAATAGGTCAGGCAGTCATGGAGCATGCCTTTAATCCCAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATAATAGGTCAGGCAGTCATGGAGCATGCCTTTAATCCCAGCAC  350

seq1  TTCAGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGTCAGCCTGATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGTCAGCCTGATTTA  400

seq1  CAGAGTGAGTTCCAGGAGATCGAGGGCTACACAGAAAAACCCTGTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAGTTCCAGGAGATCGAGGGCTACACAGAAAAACCCTGTCTTGA  450

seq1  GACAAACAAACAAACAAAAAAGAAAAAAAAAAGAAAGAAAAGCTTAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACAAACAAACAAAAAAGAAAAAAAAAAGAAAGAAAAGCTTAACAG  500

seq1  TTCTGTCATTTGTCATTTATATTGCCTCCGAACACTGAAAACAATATGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCATTTGTCATTTATATTGCCTCCGAACACTGAAAACAATATGCC  550

seq1  TACACTATACACCTGCAGTCTTTAGTGAAACTTCAAAGTTACAGAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTATACACCTGCAGTCTTTAGTGAAACTTCAAAGTTACAGAGGAAA  600

seq1  ATACTGCATTGCAGCTCTCTGTGTCTGCAGCAAAACTCTGGTGGTATTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCATTGCAGCTCTCTGTGTCTGCAGCAAAACTCTGGTGGTATTCC  650

seq1  ACTGCAGAGGAGGAGCCCCAACAAAGGCAGCCCGTTTACAGCTCAGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAGGAGGAGCCCCAACAAAGGCAGCCCGTTTACAGCTCAGCTCT  700

seq1  GCTCAGCACATCCAGCTCAAGAATACAGTGAAAAAGGGAACTTAAAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCACATCCAGCTCAAGAATACAGTGAAAAAGGGAACTTAAAATGC  750

seq1  -TTGTGAGCTTGGAAGGTAGGGAGAGAGGCTAGAAACATAGAT-ACT-AA  797
       |||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  TTTGTGAGCTTGGAAGGTAGGGAGAGAGGCTAGAAACATAGATAACTAAA  800

seq1  TTGATCAGCTATGCTCTTTCATAATGTATTTTAAAATTATGTATTATT-G  846
      ||||||||||||||||||||||||||||||| ||| |||||||||||| |
seq2  TTGATCAGCTATGCTCTTTCATAATGTATTTAAAATTTATGTATTATTGG  850

seq1  GCTTATCAG-ACAATAGAATTTCTTCAAATT-GGCAGG-TATTTTA-TTT  892
      ||||||||| |||||| |||||  ||||||| |||||| ||||||| |||
seq2  GCTTATCAGAACAATAAAATTTTCTCAAATTGGGCAGGTTATTTTATTTT  900

seq1  CATGTCAATTTTGAAGTCCAGAGAATTTGTGAAAAAGACTCACAA-TACA  941
      |||||| ||||||||||| ||||| || ||||||||||||||||| ||||
seq2  CATGTCCATTTTGAAGTCAAGAGATTTGGTGAAAAAGACTCACAATTACA  950

seq1  G-ATATATTTGGTTGTTTCTATGAGATTTGCTTGACTTTTAC-AGTAGGT  989
      | |||||||||| ||||||||||||| ||||||||||||||| |||| ||
seq2  GAATATATTTGGGTGTTTCTATGAGAATTGCTTGACTTTTACAAGTA-GT  999

seq1  GACCATTCCCCAATTTTTTATTGCAT  1015
      ||||| ||||||| ||||||||||||
seq2  GACCA-TCCCCAA-TTTTTATTGCAT  1023