BAC Information

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BAC

Clone NameB6Ng01-110L24
Chromosome3 (Build37)
Map Location 78,489,030 - 78,489,754
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626461, LOC667526, LOC626479, LOC100041691
Downstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110L24.bB6Ng01-110L24.g
ACCDH917284DH917285
length7251,149
definitionDH917284|Mus musculus domesticus DNA, BAC clone: B6Ng01-110L24, 5' end.DH917285|Mus musculus domesticus DNA, BAC clone: B6Ng01-110L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaaaaaaaagaaatttcatcttctaacacaggttgcaagtt
taataagctgaaagcaaagactgttcatttatcaagtaagaagctaaaag
gtggccctaaattctagaaatctggtgatctctagatattgaaatggtcc
cagcaagtccatatgtagaaatcttctctgactgctctctgggttgtttt
gctattttttggtaggacaaattgttgcatgagtatgattgaagccatag
acaagaaggctgctggaactggcaaggtcaccaagtctgcccttcaaaaa
agttcagaagccaatgtgagtattattcctaacctctgggctttaatcag
aagcaaggtctccacttctgtatttgccaggcactagcatagccttacaa
gagatagctatatcagggtcctatcatcaaaatctgatgctcacagtcat
cttttggaaggaacacagggcccccaatgaaggagctagtgaaagtaccc
atggagctaaaggggtctgcaaccctataggaggaaaaacaacagaacta
accagtaccccccagggcttgtgtctctagttgcatacgtagcagaggat
ggcctagtaggccatcaatggaaggagaggccgttggttttgcaaagatt
atatgccccagtacaagggccaggaatgtcagggccaggaagtggaagtg
ggtgggttggggagcagggtggggg
gaattctcacctgaggaataccgaatggctgagaagcaccagaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgcga
ttccacctcacaccagtcagaatggctaagatcaaaacttcatgtgacag
cagatgctcatgaggatttggacaaagaggaacactcctccattgttggt
aggattgcaagctcgtacaactactctggaaatcattctggcggttcctc
agaaaattggacatagtactactggaggatcccgcaatacctctcctgga
catatatccagaagatgttccaactagtaagaaagacacgtgctactcta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaatagtacatttacacaatgg
agtactactcagctcttacaaagaatgaatttatgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgatatgtcctcactgataagtggatagtagcccagaaact
tagaataccaaagatataagatacaatttgcaaaacacatgaaactgaag
acgaagaccaaagtgtggacactttaaaatatatatattaagaaagacta
atagtatcaccaaataactaagaagacaaaacctcaactagacttctctc
aaaactaaatgagacctccagtgcagaaaatgaattacatctaatagagt
tgttggccaaagatacactatgggaaacccctccaaaaccaatgatattg
ccaggctattgcttgggtctgtacaactgatagcaatccctattgctaaa
gataacactacataactcatgaacctggagacatcagctgtgcctactat
aactttacccctactgactagtgtcatgggtacttaagatacactgaatg
tatcagaagaaaagttaggtgccaaacacaccacatattcagagggtcca
caatgggtgatcttctgccaggtatactggtacaataattatagatgtaa
tcattactacctgatggaataagcctctcacctcatgaaagtgggaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_78489030_78489754
seq2: B6Ng01-110L24.b_47_771 (reverse)

seq1  CCCCCACCCTGCTCCCCAACCCACCCACTTCCACTTCCTGGCCCTGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCTGCTCCCCAACCCACCCACTTCCACTTCCTGGCCCTGACAT  50

seq1  TCCTGGCCCTTGTACTGGGGCATATAATCTTTGCAAAACCAACGGCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCCTTGTACTGGGGCATATAATCTTTGCAAAACCAACGGCCTCT  100

seq1  CCTTCCATTGATGGCCTACTAGGCCATCCTCTGCTACGTATGCAACTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCATTGATGGCCTACTAGGCCATCCTCTGCTACGTATGCAACTAGA  150

seq1  GACACAAGCCCTGGGGGGTACTGGTTAGTTCTGTTGTTTTTCCTCCTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGCCCTGGGGGGTACTGGTTAGTTCTGTTGTTTTTCCTCCTATA  200

seq1  GGGTTGCAGACCCCTTTAGCTCCATGGGTACTTTCACTAGCTCCTTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAGACCCCTTTAGCTCCATGGGTACTTTCACTAGCTCCTTCATT  250

seq1  GGGGGCCCTGTGTTCCTTCCAAAAGATGACTGTGAGCATCAGATTTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCCTGTGTTCCTTCCAAAAGATGACTGTGAGCATCAGATTTTGAT  300

seq1  GATAGGACCCTGATATAGCTATCTCTTGTAAGGCTATGCTAGTGCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGACCCTGATATAGCTATCTCTTGTAAGGCTATGCTAGTGCCTGGC  350

seq1  AAATACAGAAGTGGAGACCTTGCTTCTGATTAAAGCCCAGAGGTTAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAAGTGGAGACCTTGCTTCTGATTAAAGCCCAGAGGTTAGGAA  400

seq1  TAATACTCACATTGGCTTCTGAACTTTTTTGAAGGGCAGACTTGGTGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCACATTGGCTTCTGAACTTTTTTGAAGGGCAGACTTGGTGACC  450

seq1  TTGCCAGTTCCAGCAGCCTTCTTGTCTATGGCTTCAATCATACTCATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGTTCCAGCAGCCTTCTTGTCTATGGCTTCAATCATACTCATGCA  500

seq1  ACAATTTGTCCTACCAAAAAATAGCAAAACAACCCAGAGAGCAGTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTGTCCTACCAAAAAATAGCAAAACAACCCAGAGAGCAGTCAGAG  550

seq1  AAGATTTCTACATATGGACTTGCTGGGACCATTTCAATATCTAGAGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCTACATATGGACTTGCTGGGACCATTTCAATATCTAGAGATCA  600

seq1  CCAGATTTCTAGAATTTAGGGCCACCTTTTAGCTTCTTACTTGATAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTCTAGAATTTAGGGCCACCTTTTAGCTTCTTACTTGATAAATG  650

seq1  AACAGTCTTTGCTTTCAGCTTATTAAACTTGCAACCTGTGTTAGAAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTTTGCTTTCAGCTTATTAAACTTGCAACCTGTGTTAGAAGATG  700

seq1  AAATTTCTTTTTTTTAATTGAATTC  725
      |||||||||||||||||||||||||
seq2  AAATTTCTTTTTTTTAATTGAATTC  725