BAC Information

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BAC

Clone NameB6Ng01-111E14
Chromosome3 (Build37)
Map Location 23,478,080 - 23,611,027
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040378, LOC623751, LOC100039548
Downstream geneEG635702, EG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111E14.bB6Ng01-111E14.g
ACCDH917668DH917669
length888872
definitionDH917668|Mus musculus domesticus DNA, BAC clone: B6Ng01-111E14, 5' end.DH917669|Mus musculus domesticus DNA, BAC clone: B6Ng01-111E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,610,142 - 23,611,027)(23,478,080 - 23,478,916)
sequence
gaattcttaaatctcaggaagcattctaagttggcatacatttaacagga
gtatatgttaaatagaaagcacaaattcaaataatatcgtacatccgtaa
atatgaatataaataaatgtcaagtgtatgtagagatagaccaggggaat
aatttactttcctctttgaagaaggtaatgaaaaagatttctgtttcatt
tgcaaatgaaatgggagggggagtgtagggattcattttcttgttgctgc
tgttatttatgaacaacaactagcatgagaataaactgatcattttcctg
aattttaaaataaacaatgaaattttcaagcaaaagataagtcatacttt
gaagctgatattatttggggacttgactggtttgaagaggtcaaaacttg
tcctgaagcatgctgggagaagctctgcagcagatgccaggggtcagata
attctgagactgtttagcctcgagctacagttgagaaatcatgctccagg
ctttgaggaactgtgggaatgtggactgtggtatttagggtgtgaggctt
aagcagttcttctttctctctgctcaactccgagttcaaacttaatggtt
aaatcctttcctggaaccagaaccattggcagacctctcattcaaggaaa
agaaaaatgttcagaaaatatatttagctaccaataggaaggaaaataaa
tctaaggcagctaccgtcctacattgcttcttcttgaaagaggaatggac
actggatcctgtctaaagaacactccatgattgtaaaaatcaaaagtaaa
aaacactagaggagttagaaagatgcacatacatgaagactggattatgg
gtcatgagtacatgccctaaggggggggggggcacata
gaattccaagtaccataattttctaaatctatttgtaatgagatgttttt
tggggggtaagatcgtcataatacagaaaatgactacttagaaagtaaaa
gccacatttcaatgatttcaaagcatcaaaatgaagcaaaattctctaaa
tataataattttaaggattatgtatcattagtataatctttttatgcatc
aataaaattcattaaaatcttaatgctaaaaaggaggaaaattatattct
tccaataatgattatgttaattccagcaacccaaaacttggtaatttctt
tctactgaatcctgttaaaaatgcagatatccagcctgcgatcttggttc
tgggactcagcagaacttaggaaactagtctgaacaggtgagagggtgca
ccagagaaccggacagcttctgggacaggcggaagcacagagccgctgag
gcagcacccttggcgggccacagacagccggccaccgtccggaccagagg
acaggtgtccgcctggcttgggaggcagcctcagcctcaggagcagcggt
cgccatcttggttccgggactccctggaacttaggaatttagtctgcaca
ggtgagagtctgcaccacagaagctgacagcttctgggaactgccaaagc
aacacagcttctgagaaaggccctgttttgggccttcttcttcgaccagg
aggaggtccaaaaacaagatatctgcgcaccttccctgtaagagagcttg
ccagcagagagtgctctgagcactgaaactcagaggagagaatttgtctc
ccaggtctgctgatagacggtaacagaatcaccagaagaacaatctctaa
acagagtcaactatactactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23610142_23611027
seq2: B6Ng01-111E14.b_44_931 (reverse)

seq1  TATGTGCCCCCCCCCACCTTTGGGCATGTACTCATGACCCAATATCCAGT  50
      ||||||||||||||| |||| ||||||||||||||||||||  |||||||
seq2  TATGTGCCCCCCCCCCCCTTAGGGCATGTACTCATGACCCATAATCCAGT  50

seq1  CTTCATGTATGTGCATCTTTCTAACTCCTCTAGTG-TTTTTACTTTTGAT  99
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTCATGTATGTGCATCTTTCTAACTCCTCTAGTGTTTTTTACTTTTGAT  100

seq1  TTTTACAATCATGGAGTGTTCTTTAGACAGGAATCCAGTGTCCATTCCTC  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTACAATCATGGAGTGTTCTTTAGACAGG-ATCCAGTGTCCATTCCTC  149

seq1  TTTCAAGAAGAAGC-ATGTAGGACGGTAGCTGCCTTAGATTTATTTTCCT  198
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAAGAAGCAATGTAGGACGGTAGCTGCCTTAGATTTATTTTCCT  199

seq1  TCCTATTGGTAGCTAAATATATTTTCTGAACATTTTTC-TTTCCTTGAAT  247
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCCTATTGGTAGCTAAATATATTTTCTGAACATTTTTCTTTTCCTTGAAT  249

seq1  GAGAGGTCTGCCAATGGTTCTGGTTCCAGGAAAGGATTTAACCATTAAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTCTGCCAATGGTTCTGGTTCCAGGAAAGGATTTAACCATTAAGT  299

seq1  TTGAACTCGGAGTTGAGCAGAGAGAAAGAAGAACTGCTTAAGCCTCACAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCGGAGTTGAGCAGAGAGAAAGAAGAACTGCTTAAGCCTCACAC  349

seq1  CCTAAATACCACAGTCCACATTCCCACAGTTCCTCAAAGCCTGGAGCATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATACCACAGTCCACATTCCCACAGTTCCTCAAAGCCTGGAGCATG  399

seq1  ATTTCTCAACTGTAGCTCGAGGCTAAACAGTCTCAGAATTATCTGACCCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAACTGTAGCTCGAGGCTAAACAGTCTCAGAATTATCTGACCCC  449

seq1  TGGCATCTGCTGCAGAGCTTCTCCCAGCATGCTTCAGGACAAGTTTTGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTGCTGCAGAGCTTCTCCCAGCATGCTTCAGGACAAGTTTTGAC  499

seq1  CTCTTCAAACCAGTCAAGTCCCCAAATAATATCAGCTTCAAAGTATGACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAAACCAGTCAAGTCCCCAAATAATATCAGCTTCAAAGTATGACT  549

seq1  TATCTTTTGCTTGAAAATTTCATTGTTTATTTTAAAATTCAGGAAAATGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTGCTTGAAAATTTCATTGTTTATTTTAAAATTCAGGAAAATGA  599

seq1  TCAGTTTATTCTCATGCTAGTTGTTGTTCATAAATAACAGCAGCAACAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTATTCTCATGCTAGTTGTTGTTCATAAATAACAGCAGCAACAAG  649

seq1  AAAATGAATCCCTACACTCCCCCTCCCATTTCATTTGCAAATGAAACAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATCCCTACACTCCCCCTCCCATTTCATTTGCAAATGAAACAGA  699

seq1  AATCTTTTTCATTACCTTCTTCAAAGAGGAAAGTAAATTATTCCCCTGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTCATTACCTTCTTCAAAGAGGAAAGTAAATTATTCCCCTGGT  749

seq1  CTATCTCTACATACACTTGACATTTATTTATATTCATATTTACGGATGTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTACATACACTTGACATTTATTTATATTCATATTTACGGATGTA  799

seq1  CGATATTATTTGAATTTGTGCTTTCTATTTAACATATACTCCTGTTAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATTATTTGAATTTGTGCTTTCTATTTAACATATACTCCTGTTAAAT  849

seq1  GTATGCCAACTTAGAATGCTTCCTGAGATTTAAGAATTC  886
      |||||||||||||||||||||||||||||||||||||||
seq2  GTATGCCAACTTAGAATGCTTCCTGAGATTTAAGAATTC  888

seq1: chr3_23478080_23478916
seq2: B6Ng01-111E14.g_67_903

seq1  GAATTCCAAGTACCATAATTTTCTAAATCTATTTGTAATGAGATGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTACCATAATTTTCTAAATCTATTTGTAATGAGATGTTTTT  50

seq1  TGGGGGGTAAGATCGTCATAATACAGAAAATGACTACTTAGAAAGTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTAAGATCGTCATAATACAGAAAATGACTACTTAGAAAGTAAAA  100

seq1  GCCACATTTCAATGATTTCAAAGCATCAAAATGAAGCAAAATTCTCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATTTCAATGATTTCAAAGCATCAAAATGAAGCAAAATTCTCTAAA  150

seq1  TATAATAATTTTAAGGATTATGTATCATTAGTATAATCTTTTTATGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATTTTAAGGATTATGTATCATTAGTATAATCTTTTTATGCATC  200

seq1  AATAAAATTCATTAAAATCTTAATGCTAAAAAGGAGGAAAATTATATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTCATTAAAATCTTAATGCTAAAAAGGAGGAAAATTATATTCT  250

seq1  TCCAATAATGATTATGTTAATTCCAGCAACCCAAAACTTGGTAATTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAATGATTATGTTAATTCCAGCAACCCAAAACTTGGTAATTTCTT  300

seq1  TCTACTGAATCCTGTTAAAAATGCAGATATCCAGCCTGCGATCTTGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGAATCCTGTTAAAAATGCAGATATCCAGCCTGCGATCTTGGTTC  350

seq1  TGGGACTCAGCAGAACTTAGGAAACTAGTCTGAACAGGTGAGAGGGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCAGCAGAACTTAGGAAACTAGTCTGAACAGGTGAGAGGGTGCA  400

seq1  CCAGAGAACCGGACAGCTTCTGGGACAGGCGGAAGCACAGAGCCGCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAACCGGACAGCTTCTGGGACAGGCGGAAGCACAGAGCCGCTGAG  450

seq1  GCAGCACCCTTGGCGGGCCACAGACAGCCGGCCACCGTCCGGACCAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACCCTTGGCGGGCCACAGACAGCCGGCCACCGTCCGGACCAGAGG  500

seq1  ACAGGTGTCCGCCTGGCTTGGGAGGCAGCCTCAGCCTCAGGAGCAGCGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGTCCGCCTGGCTTGGGAGGCAGCCTCAGCCTCAGGAGCAGCGGT  550

seq1  CGCCATCTTGGTTCCGGGACTCCCTGGAACTTAGGAATTTAGTCTGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATCTTGGTTCCGGGACTCCCTGGAACTTAGGAATTTAGTCTGCACA  600

seq1  GGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGC  650

seq1  AACACAGCTTCTGAGAAAGGCCCTGTTTTGGGCCTTCTTCTTCGACCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCTTCTGAGAAAGGCCCTGTTTTGGGCCTTCTTCTTCGACCAGG  700

seq1  AGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGAGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGAGCTTG  750

seq1  CCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATTTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATTTGTCTC  800

seq1  CCAGGTCTGCTGATAGACGGTAACAGAATCACCAGAA  837
      |||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTGCTGATAGACGGTAACAGAATCACCAGAA  837