MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-111F06
Chromosome	3 (Build37)
Map Location	66,736,153 - 66,736,516
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ccnl1, LOC625048, Veph1, Tpi-rs2, Ptx3, LOC625115
Downstream gene	Shox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ccnl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56706 MGI:1922664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625048 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Veph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72789 MGI:1920039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tpi-rs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111205 MGI:98800
definition	gene_synonym : Tpi-2 note : triosephosphate isomerase related sequence 2 pseudo : _no_value

name	Ptx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19288 MGI:104641
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Shox2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20429 MGI:1201673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rsrc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66880 MGI:1914130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mlf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17349 MGI:1341819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gfm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28030 MGI:107339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lxn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17035 MGI:107633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rarres1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109222 MGI:1924461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 4 Proteins

name	Mfsd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66868 MGI:1914118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667207 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 90 ESTs, 4 Proteins pseudo : _no_value

name	Gm412 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208424 MGI:2685258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins

name	EG208426 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208426 MGI:3644166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403610 GeneID:56706 MGI:1922664
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin L1 transcript_id : NM_019937.3

name	Veph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383372 GeneID:72789 MGI:1920039
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ventricular zone expressed PH domain homolog 1 (zebrafish) transcript_id : NM_028357.2

name	Veph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281745 GeneID:72789 MGI:1920039
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ventricular zone expressed PH domain homolog 1 (zebrafish) transcript_id : NM_145820.1

name	Ptx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930725 GeneID:19288 MGI:104641
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pentraxin related gene transcript_id : NM_008987.3

name	Shox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305488 GeneID:20429 MGI:1201673
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : short stature homeobox 2 transcript_id : NM_013665.1

name	Rsrc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113204628 GeneID:66880 MGI:1914130
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine/serine-rich coiled-coil 1 transcript_id : NM_025822.3

name	Mlf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88196768 GeneID:17349 MGI:1341819
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myeloid leukemia factor 1 transcript_id : NM_010801.2

name	Mlf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88196766 GeneID:17349 MGI:1341819
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myeloid leukemia factor 1 transcript_id : NM_001039543.1

name	Gfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20070401 GeneID:28030 MGI:107339
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G elongation factor, mitochondrial 1 transcript_id : NM_138591.1

name	Lxn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363612 GeneID:17035 MGI:107633
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : latexin transcript_id : NM_016753.3

name	Rarres1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251197 GeneID:109222 MGI:1924461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 4 Proteins product : retinoic acid receptor responder (tazarotene induced) 1 transcript_id : XM_001475793.1

name	Mfsd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803259 GeneID:66868 MGI:1914118
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major facilitator superfamily domain containing 1 transcript_id : NM_025813.2

name	Gm412 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82890075 GeneID:208424 MGI:2685258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins product : gene model 412, (NCBI) transcript_id : XM_889797.1

name	EG208426 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802156 GeneID:208426 MGI:3644166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG208426 transcript_id : NM_177585.3

name	Ccnl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70906460 CCDS:CCDS17390.1 GeneID:56706 MGI:1922664
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0008023 - transcription elongation factor complex [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : cyclin ania-6a product : cyclin L1 protein_id : NP_064321.2

name	Veph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281746 CCDS:CCDS17391.1 GeneID:72789 MGI:1920039
definition	codon_start : 1 exception : mismatches in translation note : isoform A is encoded by transcript variant Veph-A product : VEPH isoform A protein_id : NP_665819.1

name	Veph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003852 GeneID:72789 MGI:1920039
definition	codon_start : 1 note : isoform B is encoded by transcript variant Veph-B product : VEPH isoform B protein_id : NP_082633.1

name	Ptx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930726 CCDS:CCDS17392.1 GeneID:19288 MGI:104641
definition	GO_function : GO:0001872 - zymosan binding [Evidence IMP] GO_process : GO:0008228 - opsonization [Evidence IMP]; GO:0045429 - positive regulation of nitric oxide biosynthesis [Evidence IMP]; GO:0050766 - positive regulation of phagocytosis [Evidence IMP]; GO:0001878 - response to yeast [Evidence IMP] codon_start : 1 note : pentraxin 3; pentaxin related product : pentraxin related protein_id : NP_033013.3

name	Shox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305489 CCDS:CCDS17393.1 GeneID:20429 MGI:1201673
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0048557 - embryonic digestive tract morphogenesis [Evidence IMP]; GO:0048598 - embryonic morphogenesis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : short stature homeobox 2 protein_id : NP_038693.1

name	Rsrc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385292 CCDS:CCDS17394.1 GeneID:66880 MGI:1914130
definition	codon_start : 1 product : arginine/serine-rich coiled-coil 1 protein_id : NP_080098.1

name	Mlf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88196767 CCDS:CCDS17395.1 GeneID:17349 MGI:1341819
definition	GO_component : GO:0005813 - centrosome [Evidence ISS] [Evidence IDA]; GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030097 - hemopoiesis [Evidence TAS] [Evidence ISS] codon_start : 1 note : isoform a is encoded by transcript variant 1; hematopoietic lineage switch 7 product : myeloid leukemia factor 1 isoform a protein_id : NP_001034632.1

name	Mlf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88196769 CCDS:CCDS17396.1 GeneID:17349 MGI:1341819
definition	GO_component : GO:0005813 - centrosome [Evidence ISS] [Evidence IDA]; GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030097 - hemopoiesis [Evidence TAS] [Evidence ISS] codon_start : 1 note : myeloid leukemia factor 1 (MGD\|MGI:1341819 GB\|NM_010801, evidence: BLASTN, 99%, match=984); putative; isoform b is encoded by transcript variant 2; hematopoietic lineage switch 7 product : myeloid leukemia factor 1 isoform b protein_id : NP_034931.2

name	Gfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070402 GeneID:28030 MGI:107339
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : mitochondrial product : G elongation factor 1 protein_id : NP_613057.1

name	Lxn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980632 CCDS:CCDS17397.1 GeneID:17035 MGI:107633
definition	GO_function : GO:0004857 - enzyme inhibitor activity [Evidence IEA]; GO:0008191 - metalloendopeptidase inhibitor activity [Evidence IMP] GO_process : GO:0050965 - detection of temperature stimulus during sensory perception of pain [Evidence IMP] codon_start : 1 product : latexin protein_id : NP_058033.2

name	Rarres1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251198 GeneID:109222 MGI:1924461
definition	codon_start : 1 product : retinoic acid receptor responder (tazarotene induced) 1 protein_id : XP_001475843.1

name	Mfsd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313266 GeneID:66868 MGI:1914118
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : major facilitator superfamily domain containing 1 protein_id : NP_080089.1

name	Gm412 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82890076 GeneID:208424 MGI:2685258
definition	codon_start : 1 product : similar to nucleoside/nucleotide receptor protein_id : XP_894890.1

name	EG208426 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243940 GeneID:208426 MGI:3644166
definition	codon_start : 1 product : hypothetical protein LOC208426 protein_id : NP_808253.1

name	LOC625048 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625048
definition	number : 3 pseudo : _no_value

name	LOC625048 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625048
definition	number : 2 pseudo : _no_value

name	LOC625048 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625048
definition	number : 1 pseudo : _no_value

name	LOC625115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625115
definition	number : 1 pseudo : _no_value

name	LOC625115 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625115
definition	number : 2 pseudo : _no_value

name	LOC667207 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251202 GeneID:667207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 90 ESTs, 4 Proteins product : similar to Chmp1a protein pseudo : _no_value transcript_id : XR_032481.1

clone name	MSMg01-511M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-046K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330B13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-497H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337H10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-494N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376J20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-396K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-111F06.b	B6Ng01-111F06.g
ACC	DH917700	DH917701
length	364	569
definition	DH917700\|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F06, 5' end.	DH917701\|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F06, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	catggatatttggaggagggagaaaacctgtagacatgttcattgctata aacaagtagctgtattttctactctccttacccttatccattctgatgtt gaaaatgtcaacgtgaatgagattgtatcaaaccagaaagtcactctgaa atttaaatcagaaaaaaaaaaaaactaaaatgaaagctaaatacttggac tcaaaaatggattactcttatcaataaagctgtgatcaccatccagctta aagactaattatataactaagactgattaatatgctgtaaacatcagaca cccaggcaaggggacagagagagagagagagagggagagagggagagagg gagagagagagaga	cactccctaccaaaacctaattaaagccataaccaggggcattttttaaa gacctacactttatacactgtggaaaaagaattgttcattggtgggttgc tggtagcgaaaaactaaaaaacaaaatggtaaaactcaagcctctacaaa accacgattacatcacagcacctgaaaacagtaaattctgactgtctgct tacttcaagaagcacctcagaagcccaacaagcagctcaaagcatcaggt gcagatacttacacccaaccaatggacagaaaccagggacccctgtggtc taattaggtaaaagctagaagaagctgaggaagagggcaaccccagagga agaccagcagtctcaactaacctggacccctgagatctctcagatactga gtcaccaaccaggcagcaaacaccagctgatacaaggcccctgacacata tacagcagaggactacctggtctggcctcagtaagagaagatgcatctaa ccctagagaaatttgaggcctcaggcagtgaggaggtctggtgaggtgtg tgtgtgtgtgtgtgtgtgt
quality values	Open. Hide. 38 14 55 61 55 35 47 49 49 61 61 61 49 61 61 55 61 43 49 32 26 23 32 23 23 21 23 30 41 59 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 59 61 59 61 61 61 61 61 61 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 59 61 61 61 59 61 59 61 61 61 59 59 52 61 59 59 61 61 61 61 59 59 59 59 59 61 55 55 55 52 55 55 61 61 61 55 55 52 43 61 55 52 55 55 61 61 61 61 61 61 61 61 61 61 61 49 61 61 55 61 52 61 61 61 55 61 55 61 55 61 55 55 55 61 61 61 61 61 50 61 50 55 55 61 61 61 55 61 55 61 55 61 61 61 55 61 50 61 50 61 55 61 55 34 11 11	Open. Hide. 49 20 32 28 26 23 23 26 35 41 59 43 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 55 35 36 43 55 37 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 55 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 50 61 61 47 50 53 61 61 61 61 53 61 52 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 32 61 39 46 61 47 61 61 53 47 47 57 57 57 57 57 57 57 53 57 57 53 57 53 53 53 57 52 57 53 57 57 47 53 37 57 57 53 57 57 53 43 57 52 57 57 57 57 53 57 53 57 57 47 47 57 57 52 53 50 51 38 57 57 53 50 38 52 53 53 52 53 53 53 38 47 57 38 57 52 52 57 57 57 46 46 41 41 43 47 53 57 57 52 57 52 57 57 57 57 57 53 57 53 57 53 57 53 57 50 53 19

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_66736153_66736516
seq2: B6Ng01-111F06.b_51_414

seq1  CATGGATATTTGGAGGAGGGAGAAAACCTGTAGACATGTTCATTGCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATATTTGGAGGAGGGAGAAAACCTGTAGACATGTTCATTGCTATA  50

seq1  AACAAGTAGCTGTATTTTCTACTCTCCTTACCCTTATCCATTCTGATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTAGCTGTATTTTCTACTCTCCTTACCCTTATCCATTCTGATGTT  100

seq1  GAAAATGTCAACGTGAATGAGATTGTATCAAACCAGAAAGTCACTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTCAACGTGAATGAGATTGTATCAAACCAGAAAGTCACTCTGAA  150

seq1  ATTTAAATCAGAAAAAAAAAAAAACTAAAATGAAAGCTAAATACTTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATCAGAAAAAAAAAAAAACTAAAATGAAAGCTAAATACTTGGAC  200

seq1  TCAAAAATGGATTACTCTTATCAATAAAGCTGTGATCACCATCCAGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATGGATTACTCTTATCAATAAAGCTGTGATCACCATCCAGCTTA  250

seq1  AAGACTAATTATATAACTAAGACTGATTAATATGCTGTAAACATCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAATTATATAACTAAGACTGATTAATATGCTGTAAACATCAGACA  300

seq1  CCCAGGCAAGGGGACAGAGAGAGAGAGAGAGAGGGAGAGAGGGAGAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCAAGGGGACAGAGAGAGAGAGAGAGAGGGAGAGAGGGAGAGAGG  350

seq1  GAGAGAGAGAGAGA  364
      ||||||||||||||
seq2  GAGAGAGAGAGAGA  364

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information