BAC Information

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BAC

Clone NameB6Ng01-113F07
Chromosome3 (Build37)
Map Location 32,741,192 - 32,885,584
singlet/doubletdoublet
Overlap geneUsp13, Pex2
Upstream geneKcnmb2, LOC665514, Zmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5
Downstream geneEG545512, LOC100041058, Ttc14, Ccdc39
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F07.bB6Ng01-113F07.g
ACCDH919154DH919155
length1,128501
definitionDH919154|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F07, 5' end.DH919155|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,884,439 - 32,885,584)(32,741,192 - 32,741,698)
sequence
gaattcccaagtacggggagggggcgtgggagtgagtgataccagaaaca
gcaaccatcaatggcatcactcagcttcctgaagttcctagcctagccta
atatatttctttcttgccatcaacaacacattgcagtactgcaaggttgg
aaggccacacatagcacagaagtgacgtgttcatccatctggattgagac
ttttcaagctatcccctcatttctaacctgttttccacttgacctggttg
attcctaggacagtgagtacagacctttgtgtggcagcttgatgtttgtc
ccgtcatctggatctgggtcgggaactcactttttctgctgttcttttct
gtcacaaaggacatgtcttcagtataactccacttcaagtatccggttaa
tgttccagtctatagcttatacagaattgcaagtagtgccagaataaatt
gatagtgaaagagttaatactaactggcaatctcttatggctgccctaga
atgagtgtttgtgcctccaacacctaaatgtgtatgttcaaacctagttc
tttcatgggatgatagcaggaaggatgccaacacaaagacctgagttcta
atacagatgcagtgatagagacttttaatcccagtgctagagagtagaaa
cataattctaaatccagactcactggccagccagctaacctacgtagaga
gctacaggccaatgagttagcctgtcctaacaacagatgtgtatatacat
acacatcctgaggaatgacacctaagggttgttcttacacatacacatac
acacacacacacacacacacacacacacacacacacacacacacacttac
tcacatacacacacacacatacacacacacatacacacacaccatgccac
acttacatatacacacacacatcttcttatatacacccgccaccacttgc
ttgttcccatgtacctgcaccatgcaaaagaagagagaatgagcacaagt
atgtaaccttttctctttttagggggatttgagaggcggtattcaaacat
agcatctaaccccaaccttcaaatgcctaacagtaaaatgcttccctaaa
tgtattttttactgaagcgacctgctgt
tttgtttagctctgagccccattttttaatggggttataatgcattttct
acagacacccttgtacaaagatttctgtaagaaacttaccttcatgttcc
cactgacttgtgggtgccaacattcagttttgtcaggagaaggctaattc
tcatcagtgtgttagtgccagtgtgtcttcctgtcgaagtggtgaggaat
ggctgtttgtccacaccctcaccgttctttggccagattttcagtgtttg
ctagtctaatggttgagaagtgacataaaaacatttggcacttcattctg
tgatgattgaatattttcttatgtatttatagtcatttagaaagttatga
tcatcattgagtgtcattttagttatttctgtagttaactgttctattgc
tgtggtgagaccttaactctaatgcacaggcagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagagagaggagagag
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_32884439_32885584
seq2: B6Ng01-113F07.b_47_1174 (reverse)

seq1  ACAGCAAGTCGCTTCCAGT-AAAAATACATTTTTAGGGAAGCATTTTTAT  49
      |||||| ||||||| |||| |||||||||  ||||||||||||||||  |
seq2  ACAGCAGGTCGCTT-CAGTAAAAAATACA--TTTAGGGAAGCATTTTACT  47

seq1  GCTTATGCTATTGAA-GTTGGGGTTAGATGCTATGTTTTGAATACAGCCT  98
      | ||| ||  ||||| ||||||||||||||||||| ||||||||| ||||
seq2  G-TTAGGCATTTGAAGGTTGGGGTTAGATGCTATG-TTTGAATACCGCCT  95

seq1  CTTCAAATCACACCTAAAAAGAGAAAAGGTTACATTACTTGTGCTCATTC  148
      | ||||||| | |||||||||||||||||||||| |||||||||||||||
seq2  C-TCAAATC-CCCCTAAAAAGAGAAAAGGTTACA-TACTTGTGCTCATTC  142

seq1  TCTCTCTCTCTCTGCATGTGTGCAGGTACATGTGTGAACATGCAAGTGTG  198
      ||||| ||| | |||||| |||||||||||  || ||||| |||||||  
seq2  TCTCT-TCT-TTTGCATG-GTGCAGGTACA--TGGGAACAAGCAAGTG--  185

seq1  TGTGTGTGTGTGTATATATGTATGTATGTGTGTGTGTATATGTATGTGTG  248
       ||| | | ||||||||| | |   ||||||||||||||||||| |||||
seq2  -GTG-GCGGGTGTATATAAGAA--GATGTGTGTGTGTATATGTAAGTGTG  231

seq1  TGCATGTGTGTGTGTGTATGTGTGTGTGTATGTGTGTGTGTGTATGTGTG  298
       ||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  -GCATG-GTGTGTGTGTATGTGTGTGTGTATGTGTGTGTGTGTATGTGAG  279

seq1  TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  348
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  329

seq1  TATGTGTATGTGTAAGAAC-AGCCTTAGGTGTCATTCCTCAGGATGTGTA  397
      ||||||||||||||||||| | ||||||||||||||||||||||||||||
seq2  TATGTGTATGTGTAAGAACAACCCTTAGGTGTCATTCCTCAGGATGTGTA  379

seq1  TGTATATACACATCTGTTGTTAGGACAGGCTAACTCATTGGCCTGTAGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATACACATCTGTTGTTAGGACAGGCTAACTCATTGGCCTGTAGCT  429

seq1  CTCTACGTAGGTTAGCTGGCTGGCCAGTGAGTCTGGATTTAGAATTATGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACGTAGGTTAGCTGGCTGGCCAGTGAGTCTGGATTTAGAATTATGT  479

seq1  TTCTACTCTCTAGCACTGGGATTAAAAGTCTCTATCACTGCATCTGTATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTCTCTAGCACTGGGATTAAAAGTCTCTATCACTGCATCTGTATT  529

seq1  AGAACTCAGGTCTTTGTGTTGGCATCCTTCCTGCTATCATCCCATGAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGGTCTTTGTGTTGGCATCCTTCCTGCTATCATCCCATGAAAG  579

seq1  AACTAGGTTTGAACATACACATTTAGGTGTTGGAGGCACAAACACTCATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGTTTGAACATACACATTTAGGTGTTGGAGGCACAAACACTCATT  629

seq1  CTAGGGCAGCCATAAGAGATTGCCAGTTAGTATTAACTCTTTCACTATCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCAGCCATAAGAGATTGCCAGTTAGTATTAACTCTTTCACTATCA  679

seq1  ATTTATTCTGGCACTACTTGCAATTCTGTATAAGCTATAGACTGGAACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCTGGCACTACTTGCAATTCTGTATAAGCTATAGACTGGAACAT  729

seq1  TAACCGGATACTTGAAGTGGAGTTATACTGAAGACATGTCCTTTGTGACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCGGATACTTGAAGTGGAGTTATACTGAAGACATGTCCTTTGTGACA  779

seq1  GAAAAGAACAGCAGAAAAAGTGAGTTCCCGACCCAGATCCAGATGACGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAACAGCAGAAAAAGTGAGTTCCCGACCCAGATCCAGATGACGGG  829

seq1  ACAAACATCAAGCTGCCACACAAAGGTCTGTACTCACTGTCCTAGGAATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATCAAGCTGCCACACAAAGGTCTGTACTCACTGTCCTAGGAATC  879

seq1  AACCAGGTCAAGTGGAAAACAGGTTAGAAATGAGGGGATAGCTTGAAAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGTCAAGTGGAAAACAGGTTAGAAATGAGGGGATAGCTTGAAAAG  929

seq1  TCTCAATCCAGATGGATGAACACGTCACTTCTGTGCTATGTGTGGCCTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATCCAGATGGATGAACACGTCACTTCTGTGCTATGTGTGGCCTTC  979

seq1  CAACCTTGCAGTACTGCAATGTGTTGTTGATGGCAAGAAAGAAATATATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTGCAGTACTGCAATGTGTTGTTGATGGCAAGAAAGAAATATATT  1029

seq1  AGGCTAGGCTAGGAACTTCAGGAAGCTGAGTGATGCCATTGATGGTTGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGGCTAGGAACTTCAGGAAGCTGAGTGATGCCATTGATGGTTGCT  1079

seq1  GTTTCTGGTATCACTCACTCCCACGCCCCCTCCCCGTACTTGGGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGGTATCACTCACTCCCACGCCCCCTCCCCGTACTTGGGAATTC  1128

seq1: chr3_32741192_32741698
seq2: B6Ng01-113F07.g_70_576

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATAATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATAATGCA  50

seq1  TTTTCTACAGACACCCTTGTACAAAGATTTCTGTAAGAAACTTACCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACAGACACCCTTGTACAAAGATTTCTGTAAGAAACTTACCTTCA  100

seq1  TGTTCCCACTGACTTGTGGGTGCCAACATTCAGTTTTGTCAGGAGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCACTGACTTGTGGGTGCCAACATTCAGTTTTGTCAGGAGAAGGC  150

seq1  TAATTCTCATCAGTGTGTTAGTGCCAGTGTGTCTTCCTGTCGAAGTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTCATCAGTGTGTTAGTGCCAGTGTGTCTTCCTGTCGAAGTGGTG  200

seq1  AGGAATGGCTGTTTGTCCACACCCTCACCGTTCTTTGGCCAGATTTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGCTGTTTGTCCACACCCTCACCGTTCTTTGGCCAGATTTTCAG  250

seq1  TGTTTGCTAGTCTAATGGTTGAGAAGTGACATAAAAACATTTGGCACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTAGTCTAATGGTTGAGAAGTGACATAAAAACATTTGGCACTTC  300

seq1  ATTCTGTGATGATTGAATATTTTCTTATGTATTTATAGTCATTTAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGATGATTGAATATTTTCTTATGTATTTATAGTCATTTAGAAAG  350

seq1  TTATGATCATCATTGAGTGTCATTTTAGTTATTTCTGTAGTTAACTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATCATCATTGAGTGTCATTTTAGTTATTTCTGTAGTTAACTGTTC  400

seq1  TATTGCTGTGGTGAGACCTTAACTCTAATGCACAGGCAGAGAGAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGTGGTGAGACCTTAACTCTAATGCACAGGCAGAGAGAGAGAGA  450

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG  500

seq1  AGAGAGA  507
      |||||||
seq2  AGAGAGA  507