BAC Information

Click to search

BAC

Clone NameB6Ng01-113K23
Chromosome3 (Build37)
Map Location 24,979,146 - 24,979,797
singlet/doubletsinglet
Overlap genenone
Upstream geneEG635702, EG665189
Downstream geneLOC100039592, Nlgn1, LOC621017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113K23.bB6Ng01-113K23.g
ACCDH919414DH919415
length1,104653
definitionDH919414|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K23, 5' end.DH919415|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaaacctaatagaaatacttcttcaacta
ttttataaaatgcatccagaaggaatactacccaatacattctatgaagt
cacagtcacggtgatacctaaatcacacaaagccccaacaaagaaagaga
acttaagaacaatttctctcatgaatattgaagcaaaaatactcaataaa
actctcttaaactgaacccaagaacacatcaaaacactcattcaccatga
tcaagtaggattcattccagggatacagagatgatttaacatacaaaaat
ccattaatataatccactatataaacaaactcaaagggaaaaaaatgatc
atttcattagatactgtaaatgcctttgacaaaatataaccctttcatgt
tacaagtattggagagatcaggaatccaacgtccatgcataaatataata
agcacaatatatagcaaaccagtagccaacatgaaaccaaatggaaagga
acatgaagcagtcccactaaaatcagggacaaggcaagattgcccactct
ccagctatctagtcaatatagtgctcaaagttctaaacagaacaattaag
caaccaaaggagatcaaagggatacaaattaaaaaggaggaagtcaagat
gccattatttgtggatgataggatagtatacatatgtgacccaaaaagtc
tatgagagaactcttacagctgataaacaacttccacaaagtgcttggat
aaaaaaattaagtcaaacaaatcagtagctctcttctactcaaagaataa
acaggctgagaaagaaattagggaagtgacactgtttacagtagtcacaa
gtaatatatcttggtgtgactcttaccaagcaagagaaacatctgtatga
caagacttcaagtcactaaagaaaaaaaatcgaagaagacctaagtagag
ggaaagatctcccatgctcatggattggcaggattaacatagtgaaatgt
cctttaccacaagcaatctacagattcaatgcaattccccaccaaaattg
gcaatggcaattatttcacagagaaataggaaaggaagccaattcctcaa
attt
gaattcattctaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtaactttaactttagagcaattaaatcaatttttaggacctc
cctggagagtttcagtttgtcccttgagaatgtgatcactggcctgtagt
ttgacactctcatgtctgcaagaaatactgtcttaatcccactttactaa
tattgccttcccatcactgaactgtaattctttaccaatgtctttgttac
tcaacagctctgtagaagagcctgttgtctagaatcaggtcaaccacgat
gagctctgctattcctgaggatctcaacaccaatggagggaacaatttaa
gagtgggcgtcctggccaatagcagagcagaagaaatgttctgtgagttc
ctggcactttttcactctcctaagcatgtacacttcctcctggtaccagg
caaggacatgaaaccctaactagtctgaacatcctaaaaagtactcagaa
agcaaacacactctggggaaggtagaaaataggggcagaaacacagagtt
tggtgaaaatgatatggccaattaattaacttgtcccatagcaagaatgg
ttatatgagataaactgaagattcatcaaatcatttttgaaacaaaattt
taa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_24979146_24979797
seq2: B6Ng01-113K23.g_67_719

seq1  GAATTCATTCTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  50

seq1  TGTGTGTGTAACTTTAACTTTAGAGCAATTAAATCAATTTTTAGGACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTAACTTTAACTTTAGAGCAATTAAATCAATTTTTAGGACCTC  100

seq1  CCTGGAGAGTTTCAGTTTGTCCCTTGAGAATGTGATCACTGGCCTGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAGTTTCAGTTTGTCCCTTGAGAATGTGATCACTGGCCTGTAGT  150

seq1  TTGACACTCTCATGTCTGCAAGAAATACTGTCTTAATCCCACTTTACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACTCTCATGTCTGCAAGAAATACTGTCTTAATCCCACTTTACTAA  200

seq1  TATTGCCTTCCCATCACTGAACTGTAATTCTTTACCAATGTCTTTGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCTTCCCATCACTGAACTGTAATTCTTTACCAATGTCTTTGTTAC  250

seq1  TCAACAGCTCTGTAGAAGAGCCTGTTGTCTAGAATCAGGTCAACCACGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGCTCTGTAGAAGAGCCTGTTGTCTAGAATCAGGTCAACCACGAT  300

seq1  GAGCTCTGCTATTCCTGAGGATCTCAACACCAATGGAGGGAACAATTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTGCTATTCCTGAGGATCTCAACACCAATGGAGGGAACAATTTAA  350

seq1  GAGTGGGCGTCCTGGCCAATAGCAGAGCAGAAGAAATGTTCTGTGAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGCGTCCTGGCCAATAGCAGAGCAGAAGAAATGTTCTGTGAGTTC  400

seq1  CTGGCACTTTTTCACTCTCCTAAGCATGTACACTTCCTCCTGGTACCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTTTTTCACTCTCCTAAGCATGTACACTTCCTCCTGGTACCAGG  450

seq1  CAAGGACATGAAACCCTAACTAGTCTGAACATCCTAAAAAGTACTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACATGAAACCCTAACTAGTCTGAACATCCTAAAAAGTACTCAGAA  500

seq1  AGCAAACACACTCTGGGGAAGGTAGAAAATAGGGGCAGAAACACAGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACACACTCTGGGGAAGGTAGAAAATAGGGGCAGAAACACAGAGTT  550

seq1  TGGTGAAAATGATATGGCCAATTAATTAACTTGTCCCATAGCAAGAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAATGATATGGCCAATTAATTAACTTGTCCCATAGCAAGAATGG  600

seq1  TTATATGAGATAAACTGAAGATTCATCAAATCA-TTTTGAAACAAAATTT  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATATGAGATAAACTGAAGATTCATCAAATCATTTTTGAAACAAAATTT  650

seq1  AAA  652
       ||
seq2  TAA  653