BAC Information

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BAC

Clone NameB6Ng01-113L21
Chromosome3 (Build37)
Map Location 18,639,806 - 18,640,952
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113L21.bB6Ng01-113L21.g
ACCDH919458DH919459
length1,1441,165
definitionDH919458|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L21, 5' end.DH919459|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcacatccaaagcaaatctcattcctctattcgtcatttcca
tgatcaattcattgtctaggagtataagtcacttgggtgtaggtttttgc
cactcacaacttgagaccagttagacaatcaagaaaactgatcaatttca
gttccacagatgattattgggggaaacaaaaactgtaacttaggtcccaa
agctgctgttaaccacatgtactcataactatctggaaatggactcatgg
aaaatgataccgtattttagagcagataaacaaagcctaaccagtcttaa
atatgtgcatgaaaatgttctgaaggaatactatggattccatactgcaa
acagtaagtgggaactattcctgccattacagagaacatgacaggtggca
gtatgtgagtcagctctgcatcacagatatatgagtcaacttggaagaaa
aaaggtgtatttggctcctactttgagaggacctcggttgctcagctcat
ttactctgagtcctcagtggcacagtttgtcgtagttagagcatatagaa
gcaaagagatacaacaaggcattggctccaactctcttgtaagtacattt
tctcacggattcaaccttgtttcactgggcctcacaatctaagattccac
cagctcatggtaatgctgatgctgaagatccaaaagatagcatgtgggcc
actggggaccagtgaagagctaagtcctagcagtagtatactatatgtga
aactggaacacagatgtagatacaaagatctggttgaaaatctgtcaaaa
gtgacagatttccccccaaactgtgttgatattttctttcatttgccttt
ttgttacaggcattagggttgttagaaaatactaggaaaatttggctatt
tcagtttcagacggtgccctggaactgtgatattattatctctcctacct
gctcaactgtaagtgcggaaaggacttctttctattctttctagcttccc
taaagggagaaggtatcctttgtatgcattgtgcacaataaggttataac
accatatgtatttctgtgtaaaggttgccatccagcaggttcatgggttg
tctctgagggtgcatcatgttaccctccacaggcaataactcac
gaattcacacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatatggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctcgaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctatacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacgtggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccatggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagaatatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacggggctccca
atggaaggagctagagaaagtaccaaggatctaaagggatcttgcaccta
taggtgggaacaacattatgaactaaccaagtaccccgagctttttgaac
tcttagcttgccatatgtttcaaaaggatgggcccttagtcggccaccca
agggaaagagaggccattgggaccgccacaactcttattatgctctcagt
acaaggggagatcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18639806_18640952
seq2: B6Ng01-113L21.b_47_1190 (reverse)

seq1  GTGAG-TATTGCCTGTTGGAGGGT-ACATGAATGCACACTTCAAGAGCCA  48
      ||||| ||||||||| |||||||| ||||| |||||| ||   |||| ||
seq2  GTGAGTTATTGCCTG-TGGAGGGTAACATG-ATGCACCCT--CAGAGACA  46

seq1  ACCAATGAAACTACT-GATGCAAACTTTAACAACAGAAATACATAT-GTG  96
      ||| ||||| || || ||||  ||| || || |||||||||||||| |||
seq2  ACCCATGAACCTGCTGGATGGCAACCTTTAC-ACAGAAATACATATGGTG  95

seq1  TATAAACCCTTA-TGTGCAC-ATGCATAACAAAAGATACC-TCTCCCTTT  143
      | || | ||||| ||||||| |||||| ||||| |||||| |||||||||
seq2  T-TATAACCTTATTGTGCACAATGCAT-ACAAAGGATACCTTCTCCCTTT  143

seq1  AGGG-AGCTAGAAAAGAATTAGAAAGAAGTCCTTTCCGCACTTAACAGTT  192
      |||| |||||| |||||| |||||||||||||||||||||||| ||||||
seq2  AGGGAAGCTAG-AAAGAA-TAGAAAGAAGTCCTTTCCGCACTT-ACAGTT  190

seq1  GAGCAGGTAGGAGAGATAATAATATCACAGTTCCAGGGCACCGTTCTGAA  242
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGCAGGTAGGAGAGATAATAATATCACAGTTCCAGGGCACCG-TCTGAA  239

seq1  ACTGAAATAGCCAAATTTTCCTAGTATTTTCTAACAACCCTAATGCCTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATAGCCAAATTTTCCTAGTATTTTCTAACAACCCTAATGCCTGT  289

seq1  AACAAAAAGGCAAATGAAAGAAAATATCAACACAGTTTGGGGGGAAATCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAGGCAAATGAAAGAAAATATCAACACAGTTTGGGGGGAAATCT  339

seq1  GTCACTTTTGACAGATTTTCAACCAGATCTTTGTATCTACATCTGTGTTC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTTTGACAGATTTTCAACCAGATCTTTGTATCTACATCTGTGTTC  389

seq1  CAGTTTCACATATAGTATACTACTGCTAGGACTTAGCTCTTCACTGGTCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCACATATAGTATACTACTGCTAGGACTTAGCTCTTCACTGGTCC  439

seq1  CCAGTGGCCCACATGCTATCTTTTGGATCTTCAGCATCAGCATTACCATG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGCCCACATGCTATCTTTTGGATCTTCAGCATCAGCATTACCATG  489

seq1  AGCTGGTGGAATCTTAGATTGTGAGGCCCAGTGAAACAAGGTTGAATCCG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTGGAATCTTAGATTGTGAGGCCCAGTGAAACAAGGTTGAATCCG  539

seq1  TGAGAAAATGTACTTACAAGAGAGTTGGAGCCAATGCCTTGTTGTATCTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAATGTACTTACAAGAGAGTTGGAGCCAATGCCTTGTTGTATCTC  589

seq1  TTTGCTTCTATATGCTCTAACTACGACAAACTGTGCCACTGAGGACTCAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTATATGCTCTAACTACGACAAACTGTGCCACTGAGGACTCAG  639

seq1  AGTAAATGAGCTGAGCAACCGAGGTCCTCTCAAAGTAGGAGCCAAATACA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGAGCTGAGCAACCGAGGTCCTCTCAAAGTAGGAGCCAAATACA  689

seq1  CCTTTTTTCTTCCAAGTTGACTCATATATCTGTGATGCAGAGCTGACTCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTCTTCCAAGTTGACTCATATATCTGTGATGCAGAGCTGACTCA  739

seq1  CATACTGCCACCTGTCATGTTCTCTGTAATGGCAGGAATAGTTCCCACTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGCCACCTGTCATGTTCTCTGTAATGGCAGGAATAGTTCCCACTT  789

seq1  ACTGTTTGCAGTATGGAATCCATAGTATTCCTTCAGAACATTTTCATGCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGCAGTATGGAATCCATAGTATTCCTTCAGAACATTTTCATGCA  839

seq1  CATATTTAAGACTGGTTAGGCTTTGTTTATCTGCTCTAAAATACGGTATC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTAAGACTGGTTAGGCTTTGTTTATCTGCTCTAAAATACGGTATC  889

seq1  ATTTTCCATGAGTCCATTTCCAGATAGTTATGAGTACATGTGGTTAACAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCATGAGTCCATTTCCAGATAGTTATGAGTACATGTGGTTAACAG  939

seq1  CAGCTTTGGGACCTAAGTTACAGTTTTTGTTTCCCCCAATAATCATCTGT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGGGACCTAAGTTACAGTTTTTGTTTCCCCCAATAATCATCTGT  989

seq1  GGAACTGAAATTGATCAGTTTTCTTGATTGTCTAACTGGTCTCAAGTTGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAAATTGATCAGTTTTCTTGATTGTCTAACTGGTCTCAAGTTGT  1039

seq1  GAGTGGCAAAAACCTACACCCAAGTGACTTATACTCCTAGACAATGAATT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCAAAAACCTACACCCAAGTGACTTATACTCCTAGACAATGAATT  1089

seq1  GATCATGGAAATGACGAATAGAGGAATGAGATTTGCTTTGGATGTGATTG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGAAATGACGAATAGAGGAATGAGATTTGCTTTGGATGTGATTG  1139

seq1  AATTC  1147
      |||||
seq2  AATTC  1144