BAC Information

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BAC

Clone NameB6Ng01-113N01
Chromosome10 (Build37)3 (Build37)
Map Location 104,053,970 - 104,054,50116,459,347 - 16,460,434
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113N01.bB6Ng01-113N01.g
ACCDH919510DH919511
length1,1191,074
definitionDH919510|Mus musculus domesticus DNA, BAC clone: B6Ng01-113N01, 5' end.DH919511|Mus musculus domesticus DNA, BAC clone: B6Ng01-113N01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,970 - 104,054,501)(16,459,347 - 16,460,434)
sequence
gaattcttcaacgaattagaaggagcaatttgcaaattcatctggaataa
caaaaaacataggatagcaaaaactgttctcaaggatacaagaacctctg
gtggaatcaccatgcctgacctaaagctttactacagagcaattgtgata
aaaactgcatggtactggtatagagacagacaagtagaccaatggaatag
aattgaagacccagaaatgaacccacacacctatggtcacttgatcttcg
acaagggagctaaaaccatccagtggaagaaagacagcattttcaacaat
tggtgctggcacaactggttgttatcatgtagaagaatgcgaatcgatcc
atacttatctccttgtactaaggtcaaatctaattggatcaaggaacttc
acatacaaccagagacactgaaacttgtagaggagaaagtggggaaaagc
cttgaagatatgggcacaggggaacaattcctgaacagaacagcaatggc
ttgtgctataagatcgagaattgacaaatgggacctaatgaaactccaaa
gtttctgcaaggcaaaagacaccatcaataagacaaaaataccaccaaca
gattggaaaggatctttacctatcctaaatcagataggggactaatatcc
aacatatataaagaactcaagaaggtagacttcagaaaatcaaataaccc
cattaaaaaatggggctcagaactgaacaaagaattctcacctgaggaat
accgaatggcagagaagcacctgaaaaaatgttcaacatccttaatcatc
agggaaatgcaaatcaaaacaaccctgagattccacctcaaaccagtcag
aatggcttagataaaaaatcaggtgacagcagatgctggcgtggatgtgg
agaaagaggaacactcctccattgttggtggtattgcaggcttgtacaac
actctggaaatcagtctggccgttcttcagaaattggacatagtactact
ggaggatccagcaatactcctctaggcatattccggaagaatgccccaat
ctgtagaggacacatgcttcacctatgttcatagagccttatttataata
gcctgaagctggaaagaac
gaattctctcaacttcctacaattgaaactaatgtaatggttgtatttcc
ctattttgtatgtctacaattttcagaatatttttcttgaaattctatat
agtcaggagtaaatgtcagatttgagatatatcaccccaaacaagtatat
tttattcctattgctagtttgcacatgcctcttctgacaataatttctca
taaccttgaaattcatcactttattcatattatttcttttttattttcct
ccatttctcctctccaagttgtccagataggcagctcagcaggtatggta
tatcttggtcaagccaattttttcttaattgctatatgatgcacagcttc
tgtcaggtaaccaatgccaagtaaaggttctgtcatcccagttatgccaa
acatatgagatatatagggaacctcattgttctctgaatccagagtgaac
ttcacaacctgttctcctaatgcccagctcaaatggacctgaaataaagt
gactgcagcaatcacagtcaaatattatcaccatctggtgttggtaccct
gtgttacactagcatgtgttctttgtgtgtctttaagtgactagatttcc
acattgtaaaagccactgctacacttaatgatccctgaggtgttggttgt
aatgatccatggaaaagtaaattctgaagtatatcttaatatgttacaca
tttgtccttagaactctggatcaaagaccaataaatgttctgttttcttt
ttctgtctcatttcctacataaaatctgtctataagtgaaatgtactgag
ccagtctacatacaagcaagtccacaattcactttatccatccaagggtc
tttttgaggaaactttataacattgttgtctgcctttgttactcaggggt
gatgtctgtatctaccacttcattatttggatttagaacagaatttcagt
ttatgcttttctttttggacactctggcctataagtagttttgtcagcag
aactacattaaagctgcctgcacagttcttcttgtgatatgtggatctgt
tgccttggggtttttactgacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053970_104054501
seq2: B6Ng01-113N01.b_641_1165 (reverse)

seq1  GTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATA-GT  49
      ||||||||||||| | ||||||||||||||||||| ||||||| ||| ||
seq2  GTTCTTTCCAGCTTCAGGCTATTATAAATAAGGCT-CTATGAACATAGGT  49

seq1  GGAGCATGTGTCCTTCTTACCGGTTGGGGCA-TCTTCTGGATATATGCCC  98
      | ||||||||||||   ||| | |||||||| ||||| ||| ||||||| 
seq2  GAAGCATGTGTCCT--CTACAGATTGGGGCATTCTTCCGGA-ATATGCCT  96

seq1  AGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAC  148
      ||| || ||||||||||||||||| |||||||||||||||| ||||||| 
seq2  AGAGGA-GTATTGCTGGATCCTCCAGTAGTACTATGTCCAA-TTTCTGAA  144

seq1  GAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACC  198
      |||| ||||||| |||||||||||| |||||||||||||||||| |||||
seq2  GAACGGCCAGACTGATTTCCAGAGT-GTTGTACAAGCCTGCAATACCACC  193

seq1  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG  248
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTG  243

seq1  TCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT  298
      ||||||| |||||| |||| |||||||||||||||| |||||||||||||
seq2  TCACCTG-ATTTTTTATCTAAGCCATTCTGACTGGTTTGAGGTGGAATCT  292

seq1  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  342

seq1  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTG  392

seq1  TTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTTGATTTTCTGAAGTC  448
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTC  442

seq1  CACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGAAT  498
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATT  492

seq1  TAGGATAGGTAAAGATCCTTTCTCAATCTGTTGG  532
      |||||||||||||||||||||| |||||||||||
seq2  TAGGATAGGTAAAGATCCTTTC-CAATCTGTTGG  525

seq1: chr3_16459347_16460434
seq2: B6Ng01-113N01.g_69_1142

seq1  GAATTCTCTCAACTTCCTACAATTGAAACTAATGTAATGGTTGTATTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAACTTCCTACAATTGAAACTAATGTAATGGTTGTATTTCC  50

seq1  CTATTTTGTATGTCTACAATTTTCAGAATATTTTTCTTGAAATTCTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGTATGTCTACAATTTTCAGAATATTTTTCTTGAAATTCTATAT  100

seq1  AGTCAGGAGTAAATGTCAGATTTGAGATATATCACCCCAAACAAGTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAGTAAATGTCAGATTTGAGATATATCACCCCAAACAAGTATAT  150

seq1  TTTATTCCTATTGCTAGTTTGCACATGCCTCTTCTGACAATAATTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCTATTGCTAGTTTGCACATGCCTCTTCTGACAATAATTTCTCA  200

seq1  TAACCTTGAAATTCATCACTTTATTCATATTATTTCTTTTTTATTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGAAATTCATCACTTTATTCATATTATTTCTTTTTTATTTTCCT  250

seq1  CCATTTCTCCTCTCCAAGTTGTCCAGATAGGCAGCTCAGCAGGTATGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTCCTCTCCAAGTTGTCCAGATAGGCAGCTCAGCAGGTATGGTA  300

seq1  TATCTTGGTCAAGCCAATTTTTTCTTAATTGCTATATGATGCACAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGGTCAAGCCAATTTTTTCTTAATTGCTATATGATGCACAGCTTC  350

seq1  TGTCAGGTAACCAATGCCAAGTAAAGGTTCTGTCATCCCAGTTATGCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGTAACCAATGCCAAGTAAAGGTTCTGTCATCCCAGTTATGCCAA  400

seq1  ACATATGAGATATATAGGGAACCTCATTGTTCTCTGAATCCAGAGTGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAGATATATAGGGAACCTCATTGTTCTCTGAATCCAGAGTGAAC  450

seq1  TTCACAACCTGTTCTCCTAATGCCCAGCTCAAATGGACCTGAAATAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACCTGTTCTCCTAATGCCCAGCTCAAATGGACCTGAAATAAAGT  500

seq1  GACTGCAGCAATCACAGTCAAATATTATCACCATCTGGTGTTGGTACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAGCAATCACAGTCAAATATTATCACCATCTGGTGTTGGTACCCT  550

seq1  GTGTTACACTAGCATGTGTTCTTTGTGTGTCTTTAAGTGACTAGATTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACACTAGCATGTGTTCTTTGTGTGTCTTTAAGTGACTAGATTTCC  600

seq1  ACATTGTAAAAGCCACTGCTACACTTAATGATCCCTGAGGTGTTGGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTAAAAGCCACTGCTACACTTAATGATCCCTGAGGTGTTGGTTGT  650

seq1  AATGATCCATGGAAAAGTAAATTCTGAAGTATATCTTAATATGTTACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCATGGAAAAGTAAATTCTGAAGTATATCTTAATATGTTACACA  700

seq1  TTTGTCCTTAGAACTCTGGATC-AAGACCAATAAATGTTCTGTTTTCTTT  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTGTCCTTAGAACTCTGGATCAAAGACCAATAAATGTTCTGTTTTCTTT  750

seq1  TTCTGTCTCATTTCCTACATAAAATCTGTCTATAAGTGAAATGTACTGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTCATTTCCTACATAAAATCTGTCTATAAGTGAAATGTACTGAG  800

seq1  CCAGTCTACATACAAGCAAGTCCACAATTCACTTTATCCATCCAAGGGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTACATACAAGCAAGTCCACAATTCACTTTATCCATCCAAGGGTC  850

seq1  TTTTTGAAGGAAACTTTATAACATTTGTTGTCTGCTTTGGTTACTTCAGG  899
      |||||| |||||||||||||||| ||||||||||| || ||||| |||||
seq2  TTTTTG-AGGAAACTTTATAACA-TTGTTGTCTGCCTTTGTTAC-TCAGG  897

seq1  GGTGATGTCTGTATCTACAACTTCAATTATTTGGATTTTAGAAACAAGAA  949
      |||||||||||||||||| ||||| |||||||||| |||||||   ||||
seq2  GGTGATGTCTGTATCTACCACTTC-ATTATTTGGA-TTTAGAA--CAGAA  943

seq1  TTTTCAAGTTTATGCTTTTCTTTTTTGGAACAACTCTGGCCTATAAGTAG  999
      |||   |||||||||||||| ||||||||   ||||||||||||||||||
seq2  TTT--CAGTTTATGCTTTTC-TTTTTGGA--CACTCTGGCCTATAAGTAG  988

seq1  TTTTGTCAGCAGAACTACATTAAAAGCTGCCTGCACCAGTCTTC-TGTGC  1048
      ||||||||||||||||||||| ||||||||||||||   ||||| |||| 
seq2  TTTTGTCAGCAGAACTACATT-AAAGCTGCCTGCACAGTTCTTCTTGTG-  1036

seq1  ATATGTTGGATCTGTTGGCTTGGTGTTTTTACTGTACTTC  1088
      ||||| ||||||||||| ||||| |||||||||| |||||
seq2  ATATG-TGGATCTGTTGCCTTGGGGTTTTTACTG-ACTTC  1074