BAC Information

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BAC

Clone NameB6Ng01-113O06
Chromosome3 (Build37)
Map Location 67,779,617 - 67,780,711
singlet/doubletsinglet
Overlap geneEG208426
Upstream geneShox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
Downstream geneEG545531, LOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113O06.bB6Ng01-113O06.g
ACCDH919564DH919565
length8351,086
definitionDH919564|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O06, 5' end.DH919565|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcctggcatttccgacagaatgtataatatcgaatcactttat
gctaatgttttgcaatggaatacatattttatagctactttgaaatgcaa
atgtaaaagatctgaaaaccctcaaaatcctgccaatgtaaagtaaacta
atataaaaagaaagagttggatagataaattatagccatgccagatcaac
tagattttggtaaaagtagcgaaccatttctttataccagtcatgtaaat
acactttgatatttagaaatagagctgtgatatagctgggtcctcaggta
atactatgtacaatttcctgaaatcccccacaaaggggagggagaacctg
ttgagaccatatccagaggttaggcatggggccctgtttgagggatggga
ccacccacctatctccaacatttttacccagaattgcttctgtctaaagg
aaatacaggggcaaagagtagaacagagactgaaggaaaggccatccaga
gactgccccatctggagatccatcccacatacagacaccaaacccagaca
ctactgctgatgccaagaattgcttgctgacaggagcctgatacagctac
ctcccgagagactttgccaaatcatgaccaatacagatgtggatgctcac
agccaaccatcagactgagcacaggcgcctcaatggaggagttaggggaa
ggactgaaagagctgaaggggcctcatctggcagtaatgggaggggaggc
ccttagtcctgtgaaggcttgaagccccagtgtagaggaatgctagggca
gtgagacaggagtggataggttggtgggtggggaa
gaattctgtaagggagaataatggtgtttctaatttgactggtggtccta
aacaaagcgagttttgacaaagtttgccttggacccatgatgatttctcc
catcctctcccattcagagtcctctgctgacattccagctgcggagaaac
cccagaacagtattctcctgccatttgaatgcacaaaagaactgggtcca
tctcctgtgagaggccatgtcttcataaagctttatgtcatgagttttca
ctttcctcacaacatttgattccttagcaactctttcagggcagagcaga
aggacgcattctcagtttctgaccaggaagacaggtcatctgcagatgca
gttcagtttggatagaagactttctaccttcagcagaactggtctggtat
ctatccagagatgaacacctttgtgttgtgtctctttgtcagtggattct
aagagagtggttacttcacgttggagattgaaaacatctgagacagaacc
tgcgcttaacttgcctgagctcctgaacccaattgatcgtggggaggctg
tggattctctgttcttgtaatgaggtagcatgtagcagttgcggcttcct
tgccattcctagtattagaagcaattgtactgcagatcactagaaagtag
atcaaaatgcaaatgttggagtataattccattggaatgcatatcctatt
tggataatcataaagttgtacttccaatcagtatgagtcagagacatcaa
aataagcatttaattctcattggcttgcctttggttaaaatgttatttat
gggtagcattggaatctcagctgtggaattcatgatatgtttaaaagcag
ccaggagatggagttccagctaagatgatcactcccataagtaagtaaat
tgactaagtaggagagttctaaagactctgagggcattgggatcaggtgg
accactttggtatttgaaatgaagatcatagcagcatgcctttaggaagg
tctgtgaggtggaccatagagactatgaggtttggttttccatactttca
agcacaggatactagctgcaaagcctcgaatgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67779617_67780711
seq2: B6Ng01-113O06.g_70_1155

seq1  GAATTCTGTAAGGGAGAATAATGGTGTTTCTAATTTGACTGGTGGTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAGGGAGAATAATGGTGTTTCTAATTTGACTGGTGGTCCTA  50

seq1  AACAAAGCGAGTTTTGACAAAGTTTGCCTTGGACCCATGATGATTTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCGAGTTTTGACAAAGTTTGCCTTGGACCCATGATGATTTCTCC  100

seq1  CATCCTCTCCCATTCAGAGTCCTCTGCTGACATTCCAGCTGCGGAGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTCCCATTCAGAGTCCTCTGCTGACATTCCAGCTGCGGAGAAAC  150

seq1  CCCAGAACAGTATTCTCCTGCCATTTGAATGCACAAAAGAACTGGGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACAGTATTCTCCTGCCATTTGAATGCACAAAAGAACTGGGTCCA  200

seq1  TCTCCTGTGAGAGGCCATGTCTTCATAAAGCTTTATGTCATGAGTTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTGAGAGGCCATGTCTTCATAAAGCTTTATGTCATGAGTTTTCA  250

seq1  CTTTCCTCACAACATTTGATTCCTTAGCAACTCTTTCAGGGCAGAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCACAACATTTGATTCCTTAGCAACTCTTTCAGGGCAGAGCAGA  300

seq1  AGGACGCATTCTCAGTTTCTGACCAGGAAGACAGGTCATCTGCAGATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGCATTCTCAGTTTCTGACCAGGAAGACAGGTCATCTGCAGATGCA  350

seq1  GTTCAGTTTGGATAGAAGACTTTCTACCTTCAGCAGAACTGGTCTGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTTGGATAGAAGACTTTCTACCTTCAGCAGAACTGGTCTGGTAT  400

seq1  CTATCCAGAGATGAACACCTTTGTGTTGTGTCTCTTTGTCAGTGGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAGAGATGAACACCTTTGTGTTGTGTCTCTTTGTCAGTGGATTCT  450

seq1  AAGAGAGTGGTTACTTCACGTTGGAGATTGAAAACATCTGAGACAGAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTGGTTACTTCACGTTGGAGATTGAAAACATCTGAGACAGAACC  500

seq1  TGCGCTTAACTTGCCTGAGCTCCTGAACCCAATTGATCGTGGGGAGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTTAACTTGCCTGAGCTCCTGAACCCAATTGATCGTGGGGAGGCTG  550

seq1  TGGATTCTCTGTTCTTGTAATGAGGTAGCATGTAGCAGTTGCGGCTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCTCTGTTCTTGTAATGAGGTAGCATGTAGCAGTTGCGGCTTCCT  600

seq1  TGCCATTCCTAGTATTAGAAGCAATTGTACTGCAGATCACTAGAAAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCCTAGTATTAGAAGCAATTGTACTGCAGATCACTAGAAAGTAG  650

seq1  ATCAAAATGCAAATGTTGGAGTATAATTCCATTGGAATGCATATCCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATGCAAATGTTGGAGTATAATTCCATTGGAATGCATATCCTATT  700

seq1  TGGATAATCATAAAGTTGTACTTCCAATCAGTATGAGTCAGAGACATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAATCATAAAGTTGTACTTCCAATCAGTATGAGTCAGAGACATCAA  750

seq1  AATAAGCATTTAAATTCTCATTGGCTTGCCTTTGGTTAAAATGTTATTTA  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCATTT-AATTCTCATTGGCTTGCCTTTGGTTAAAATGTTATTTA  799

seq1  TGGGTAGCATTGGAATCTCAGCTGTGGAATTCAATGATATGTTTAAAAGC  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGGTAGCATTGGAATCTCAGCTGTGGAATTC-ATGATATGTTTAAAAGC  848

seq1  AGCCAGGAGATGGAGTTCCAGCTAAGATGATCACTCCCATAAGTAAGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGATGGAGTTCCAGCTAAGATGATCACTCCCATAAGTAAGTAA  898

seq1  ATTGACTAAGTAGGAGAGTTCTAAAGACTCTGAGGGGCATTGGGATTCAG  950
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  ATTGACTAAGTAGGAGAGTTCTAAAGACTCTGA-GGGCATTGGGA-TCAG  946

seq1  GTTGGACCACTTTGTTATTTTGAAATGAAGATCATAGCCAGCATGCCCTT  1000
      | |||||||||||| || ||||||||||||||||||| ||||||| ||||
seq2  G-TGGACCACTTTGGTA-TTTGAAATGAAGATCATAG-CAGCATG-CCTT  992

seq1  TAGGAAGGTCTTGTGAGGTGGACCATAGAGACTATGAGCTTGGGTTCT-C  1049
      |||||||||| ||||||||||||||||||||||||||| || |||| | |
seq2  TAGGAAGGTC-TGTGAGGTGGACCATAGAGACTATGAGGTTTGGTTTTCC  1041

seq1  ATACTTTCTAGTCACAAGCATCTAGCTGCAAAGCCTCAGATGTGGG  1095
      |||||||| || |||| |   ||||||||||||||||  |||||||
seq2  ATACTTTCAAG-CACAGGATACTAGCTGCAAAGCCTCGAATGTGGG  1086