BAC Information

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BAC

Clone NameB6Ng01-113O19
Chromosome3 (Build37)
Map Location 68,353,028 - 68,353,571
singlet/doubletsinglet
Overlap genenone
Upstream geneMfsd1, LOC667207, Gm412, EG208426, EG545531, LOC631379
Downstream geneSchip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4, Arl14, Ppm1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113O19.bB6Ng01-113O19.g
ACCDH919588DH919589
length1,151656
definitionDH919588|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O19, 5' end.DH919589|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctaaaaaaaaa
tgtccaacattcttagtcatcaggaaaatgcaaatcaaaacaaccctgag
attccatctctcaccagtcagaatggctaagatcaaaaacgcatgtgaca
gcagatgctgactaggatgtggagaaagaggaattgctgctgaggatgtg
gagaaaaaaacactcctccactgctggtaggattgcaagctggtacaacc
actctggaaatcagtttggtgattcctcagaaaactggacatagtactac
agaagacccagctataccactcctgggaatatagccagaagatgttccaa
catgtaataagaacacatgctccactatgttcatagcagccatatttata
atagttagaagctggaaaaaaacccagatgtccctcaacagaagaatgga
tacataaaatgtgatacatttacacaatggaatactactcagctattaaa
aacaatggcttcatgaaattcttaggcaaatggttggaactagaaaatat
catcctgagtgaggtaacccaatcacaaaagaacccacatgatatatact
cactgataggtggatattagcccagaatacccaaggtacaattcatagac
cacaggaagctcaagaaaaaggaagaccaaagtatggtccttcttagaag
ggggaacaaaatgcccacaagaggagatacagagacaaagtgtagagcaa
agactgaaggatagaccatccagagactgccccacctgggggatccatcc
catatacagttaccaaacccagacactattgtggatgccaataagtgctt
gctgacaggagcctgatatagctctctcctgagaggctgtaccagtacct
gacaaatacagaggtggactgagcacatttccccaatggaggcgctatag
aaagtacccaaggaattgaagtgtttacagccccatacaggaacaaacaa
tacgaaccaaccattacctccaaagcttcccagggactaaccatcactta
agagtacatcttggagggaacccattggctccgaatgcatatgtttgcta
gtaatgtgccttgtttgacatactaatggaaggaagagaaccctttggtc
t
gaattcttcttggtcctggggtttcatcaaagcaatagtagccctaacga
agacaacatatatccagaggcaagagcaaggggtttggaaactaaactgc
catttatagatatgacatatgtcacacttagtttcgtgaatctcctttca
ccatttatggcagggaataattaaaacacatgttattttattttagctcc
aagcttgctatgagaacctggagttgttttgttttgcttttttttttttt
ttttttttgtcaacttaacacatgctggctagggtcatctggaaagagag
aatttcaactgaaaaaatgctttcatcagacaggtctgtggggcagtttc
ttcttttcttgattaatgaatgattgatgtgggaggtcctgtcccactgt
ggtgccactcctgggcaagctaaagatgctttggagagagagcaagccac
tccgcagtagttctccacggcctctgctctgttcctgcctccaggtccct
tgttctgacttcccttcataacaaaccaactgctcattgtaggatgacag
aaatgctttcctcccaggttgcttttgttatggtgtttttcacagcaacc
aaactcaaaatgctgttgaaaaaggaaaaaagctaaaacttgtgtttaca
atgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_68353028_68353571
seq2: B6Ng01-113O19.g_178_722 (reverse)

seq1  AACATTGTGAAACACTAGTTTTAGCTTTTT--CCTTTTCAACAGCATTTT  48
      |||||||| |||||| ||||||||||||||  | ||||||||||||||||
seq2  AACATTGT-AAACACAAGTTTTAGCTTTTTTCCTTTTTCAACAGCATTTT  49

seq1  GAGTTTCGTTGCTGTGATAAACACCATAGCAAAAGCAACCTGGGAGGAAA  98
      |||||| |||||||||| |||||||||| |||||||||||||||||||||
seq2  GAGTTTGGTTGCTGTGAAAAACACCATAACAAAAGCAACCTGGGAGGAAA  99

seq1  GCATTTCTGTCATCCTACAATGAGCAGTTGGTTTGTTATGAAGGGAAGTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTGTCATCCTACAATGAGCAGTTGGTTTGTTATGAAGGGAAGTC  149

seq1  AGAACAAGGGACCTGGAGGCAGGAACAGAGCAGAGGCCGTGGAGAACTAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGGGACCTGGAGGCAGGAACAGAGCAGAGGCCGTGGAGAACTAC  199

seq1  TGCGGAGTGGCTTGCTCTCTCTCCAAAGCATCCTTAGCTTGCCCAGGAGT  248
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCGGAGTGGCTTGCTCTCTCTCCAAAGCATCTTTAGCTTGCCCAGGAGT  249

seq1  GGCACCACAGTGGGACAGGACCTCCCACATCAATCATTCATTAATCAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCACAGTGGGACAGGACCTCCCACATCAATCATTCATTAATCAAGA  299

seq1  AAAGAAGAAACTGCCCCACAGACCTGTCTGATGAAAGCATTTTCTCAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAGAAGAAACTGCCCCACAGACCTGTCTGATGAAAGCATTTTTTCAGTT  349

seq1  GAAATTCTCTCTTTCCAGATGACCCTAGCCAGCATGTGTTAAGTTGACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTCTCTTTCCAGATGACCCTAGCCAGCATGTGTTAAGTTGACAA  399

seq1  AAAAAAAAAAAAAAAAAAAGCAAAACAAAACAACTCCAGGTTCTCATAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAGCAAAACAAAACAACTCCAGGTTCTCATAGC  449

seq1  AAGCTTGGAGCTAAAATAAAATAACATGTGTTTTAATTATTCCCTGCCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGGAGCTAAAATAAAATAACATGTGTTTTAATTATTCCCTGCCAT  499

seq1  AAATGGTGAAAGGAGATTCACGAAACTAAGTGTGACATATGTCATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGAAAGGAGATTCACGAAACTAAGTGTGACATATGTCATA  545