BAC Information

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BAC

Clone NameB6Ng01-113P23
Chromosome3 (Build37)
Map Location 82,512,267 - 82,512,763
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3, Mtap9, Npy2r, LOC100041940
Downstream geneEG633285, Lrat, Fgg, Fga, Fgb, Plrg1, EG627094, Dchs2, 1700028M03Rik, LOC100042007, LOC100042091
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113P23.bB6Ng01-113P23.g
ACCDH919636DH919637
length749491
definitionDH919636|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P23, 5' end.DH919637|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaacttacattgctaagcttgccctgaactctatgtagtagat
agtaaagcctgatttctttcactgtctcttacaatactagaggcaattct
gaatgtcactgaataagcaacattcttactgaattccaagcccatggtcg
actcaaggacttttctaggatgttggaacactggcgaaggcttagctatg
tcagaattcaatccttaaaggcacttaaaataatactaaaagagagcatg
tggatccatacaccagactaacgcagggatagggtatgagtttatgggtt
atgagaatgcctaattccaggaagttgaatttccttgaaactctgcctcg
tgagtgcttccaggcctcttggcctgtcaagcagacttcactggagtgtg
cgtagcacatacatgtctttttggttctggattaccttactcaagatgat
atcctcaagtttcatacatttgcctgcaaaattcatggtatctttgtttt
tgatagctgaatagttctccattgtattgatgtaccataaaatatccatt
ctacagttgagggacatctaggtttgtttccagttttcggctattacaaa
taaagctgctgtaaacatagttaagcaggtgttcttgtggtatagtaggg
catcttttggttataagcccaggagttatgtataccttcctgggtcttga
ggtagaactattccaagttttcttagaaaattgccaaatttgacttcca
cagtagtcagttcctcacaatgcattgcttactcggctattgctctgaag
tttgtgtcagctgttttacttttctcttttccttctccaaagtgatggct
catcaagatcagatatccataagtagaaagggactaagaatgggtcttga
tatcgaaaggacccagatgtagctgtctcttgtgagactatgccggggcc
tagcaaacacagaagtggatgctcgcagtcagctaatggatggatcacag
ggctcccaatggaggagctagagaaagtacccaaggagctaaagggatct
gcaaccctataggtggaacaacattatgaactaaccagtaccccggagct
cttgactctagctgcatatgtatcaaaagatggcctagtcggccatcact
ggaaagagaggcccattggacacgcaaactttatatgccccagtacaggg
gaacgccagggccaaaaagggggagtgggtgggtaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_82512267_82512763
seq2: B6Ng01-113P23.g_71_567

seq1  GAATTCCAGTAGTCAGTTCCTCACAATGCATTGCTTACTCGGCTATTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAGTCAGTTCCTCACAATGCATTGCTTACTCGGCTATTGCT  50

seq1  CTGAAGTTTGTGTCAGCTGTTTTACTTTTCTCTTTTCCTTCTCCAAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTTGTGTCAGCTGTTTTACTTTTCTCTTTTCCTTCTCCAAAGTG  100

seq1  ATGGCTCATCAAGATCAGATATCCATAAGTAGAAAGGGACTAAGAATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCATCAAGATCAGATATCCATAAGTAGAAAGGGACTAAGAATGGG  150

seq1  TCTTGATATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCC  200

seq1  GGGGCCTAGCAAACACAGAAGTGGATGCTCGCAGTCAGCTAATGGATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTAGCAAACACAGAAGTGGATGCTCGCAGTCAGCTAATGGATGGA  250

seq1  TCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAG  300

seq1  GGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCC  350

seq1  GGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCC  400

seq1  ATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGT  450

seq1  ACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAG  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAG  497