BAC Information

Click to search

BAC

Clone NameB6Ng01-114M21
Chromosome3 (Build37)
Map Location 71,600,739 - 71,601,860
singlet/doubletsinglet
Overlap genenone
Upstream geneEG625901, EG667377
Downstream geneLOC667385, LOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114M21.bB6Ng01-114M21.g
ACCDH920232DH920233
length1,1161,104
definitionDH920232|Mus musculus domesticus DNA, BAC clone: B6Ng01-114M21, 5' end.DH920233|Mus musculus domesticus DNA, BAC clone: B6Ng01-114M21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccacgactttttcaagaatgtttgttgtactttgc
cgaatgctttctcagtatctaatgagatgatcatgtggtttttgtctttg
agtttgtttatataaaggattaggttgatggatttccaaatattgaacca
ttcatgcatccctgggttgaagcatagttgatcatgatggatgatcattt
tggtgtgttcttggattcggtttgcatgcattttattgagtatttttgca
ttgatatccataagggaaataggtctgaagctctctttctgtgttgggtc
tttgtgttgtttaggtatcagagtaattgtgtcatcatagaatgaattgg
gtagattaccttctgtttctattttgtgaaatactttgaggagaattgaa
attatgtcttcttgaaggtctgatcgaactctgcactaaacccatctggt
cctgggcttcctttggttatgagaatattaatgactgtttctaacttcta
taggggatgtgggactgtttaggtcattaatctgatcctgatttaagctt
ggtaccttgtatctatctagaaaattgtccatttcatccagattttccag
ttttgttgagtataggtttttgtagtaggatctgataatgctgtggattt
cctcatactctgttgttatatctccattttcatttctgatttttgtcagt
taggatactgaccctgtgttctctcattagtctggctagggatttatcta
tgttgtttattttctctaagaaccagcttctggtttggttgattctttgt
atagttctttttttttccacttggttgatttcagccctgaatttgattat
ttcctgatgtctactcctcttgggtgaatttgcttcccttttggaggata
gatgttcagaattgagagttatcttggtaaattttacttttgatgaatag
aagcatccttcctcatcttttttgataactttagtttaaagtcaatttta
attcgatattaggaatgctactcatctgtttccacggggcccaattggct
tagaaatcattttcagccctttacttaggtattgtctgtctttgtctctg
gaagggggttggccga
gaattcctgaaatgtacattttaagagataactgaatctctctttcttaa
caattctgaacaactcctttgcaaataatgaaacttcatgaccaactctg
cactccatgctgaaaatgtgtgtgtgttgggcttacatggatctgcaagc
ttccataattgctgtaagctcatatatgcagcagcatttcatgtctagaa
aacagttttcttgtgattatatatatcttcttatttaatacattttctcc
tctcttacacgattatctatggtgtttctagcaagcaaatttaaacaact
tatgtgttttataacttaatgttaaaagtctattaaaattatgatcattc
tctatgccactttttttctgaatttaacttattttgcacatacttcaatt
gattatcataatgattatattatgtaactaattactagtgaatcagtgtg
cttcattaattttaaaaactaaatctcagagcaataaaatatttgaaata
taaacttttgttatctgtttgtaaatatttaaaaatacatttcaaccaaa
gattaatatgttggtacaatatacagaaactataaaataatacaatttct
tgctcttctaaagacataagtattaaaacattccccacaagcttaatagc
acccattttaaaactatcgtattaaacttagtaaagtaaatatattaaaa
tcttaacgcaagaattcaataattaattttaacttagtattttttttcaa
tcctttagttaaaatctagagacttctgagtgctaggaataatactttat
cactgaaggaaatcctgaagcattaaatttggtatttactttaaaaaaaa
atccttcagatctgtgactgtgccctgttcagaccttgagtgcttgttct
ggacccagtctcagacacccagagcaagctcaactctccggtgctctata
tgctcaggatcagaggtgaggaggccacaacatctgccccataccagagt
actggaccagtggtgatcagagatcagacccacgtgccagtggcactggt
cattctttgggagaatcctgagcagaccttgagctgaaactgcaacagtc
tcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71600739_71601860
seq2: B6Ng01-114M21.g_68_1171

seq1  GAATTCCTGAAATGTACATTTTAAGAGATAACTGAATCTCTCTTTCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAATGTACATTTTAAGAGATAACTGAATCTCTCTTTCTTAA  50

seq1  CAATTCTGAACAACTCCTTTGCAAATAATGAAACTTCATGACCAACTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGAACAACTCCTTTGCAAATAATGAAACTTCATGACCAACTCTG  100

seq1  CACTCCATGCTGAAAATGTGTGTGTGTTGGGCTTACATGGATCTGCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATGCTGAAAATGTGTGTGTGTTGGGCTTACATGGATCTGCAAGC  150

seq1  TTCCATAATTGCTGTAAGCTCATATATGCAGCAGCATTTCATGTCTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAATTGCTGTAAGCTCATATATGCAGCAGCATTTCATGTCTAGAA  200

seq1  AACAGTTTTCTTGTGATTATATATATCTTCTTATTTAATACATTTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTCTTGTGATTATATATATCTTCTTATTTAATACATTTTCTCC  250

seq1  TCTCTTACACGATTATCTATGGTGTTTCTAGCAAGCAAATTTAAACAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACACGATTATCTATGGTGTTTCTAGCAAGCAAATTTAAACAACT  300

seq1  TATGTGTTTTATAACTTAATGTTAAAAGTCTATTAAAATTATGATCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTTTATAACTTAATGTTAAAAGTCTATTAAAATTATGATCATTC  350

seq1  TCTATGCCACTTTTTTTCTGAATTTAACTTATTTTGCACATACTTCAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCCACTTTTTTTCTGAATTTAACTTATTTTGCACATACTTCAATT  400

seq1  GATTATCATAATGATTATATTATGTAACTAATTACTAGTGAATCAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCATAATGATTATATTATGTAACTAATTACTAGTGAATCAGTGTG  450

seq1  CTTCATTAATTTTAAAAACTAAATCTCAGAGCAATAAAATATTTGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAATTTTAAAAACTAAATCTCAGAGCAATAAAATATTTGAAATA  500

seq1  TAAACTTTTGTTATCTGTTTGTAAATATTTAAAAATACATTTCAACCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTTGTTATCTGTTTGTAAATATTTAAAAATACATTTCAACCAAA  550

seq1  GATTAATATGTTGGTACAATATACAGAAACTATAAAATAATACAATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATATGTTGGTACAATATACAGAAACTATAAAATAATACAATTTCT  600

seq1  TGCTCTTCTAAAGACATAAGTATTAAAACATTCCCCACAAGCTTAATAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCTAAAGACATAAGTATTAAAACATTCCCCACAAGCTTAATAGC  650

seq1  ACCCATTTTAAAACTATCGTATTAAACTTAGTAAAGTAAATATATTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTTAAAACTATCGTATTAAACTTAGTAAAGTAAATATATTAAAA  700

seq1  TCTTAACGCAAGAATTCAATAATTAATTTTAACTTAGTATTTTTTTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACGCAAGAATTCAATAATTAATTTTAACTTAGTATTTTTTTTCAA  750

seq1  TCCTTTAGTTAAAATCTAGAGACTTCTGAGTGCTAGGAATAATACTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAGTTAAAATCTAGAGACTTCTGAGTGCTAGGAATAATACTTTAT  800

seq1  CACTGAAGGAAATCCTGAAGCATTAAATTTGGTATTTACTTTAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGGAAATCCTGAAGCATTAAATTTGGTATTTACTTTAAAAAAAA  850

seq1  ATCCTTCAGATCTGTGACTGTGCCCTGTTCAGACCTTGAGTGCTTGTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCAGATCTGTGACTGTGCCCTGTTCAGACCTTGAGTGCTTGTTCT  900

seq1  GGACCCAGTCTCAGAACACCCAGAGCAAGCTCAACTCTCCGGTGCTCTAA  950
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  GGACCCAGTCTCAG-ACACCCAGAGCAAGCTCAACTCTCCGGTGCTCT-A  948

seq1  TATGCTCAGGATCAGAGGTGAGGAGGCCACAACATCTGCCCCAATACCAG  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TATGCTCAGGATCAGAGGTGAGGAGGCCACAACATCTGCCCC-ATACCA-  996

seq1  GAGTAACTGGAACCAGT-GTGATCCAGAGATCCAGGAACCCCACGTGGCC  1049
      |||| ||||| |||||| ||||| ||||||||    |  ||||||| |||
seq2  GAGT-ACTGG-ACCAGTGGTGAT-CAGAGATC----AGACCCACGT-GCC  1038

seq1  AGTGGCACTGGTTCCATCCTTCTGGGGAGAACCCTGAGCAGACCTTGAGC  1099
      ||||||||||||  ||| ||  | ||||||| ||||||||||||||||||
seq2  AGTGGCACTGGT--CATTCT--TTGGGAGAATCCTGAGCAGACCTTGAGC  1084

seq1  ATGAACACTGCAGCCAGTCTCAG  1122
       |||| ||||||  |||||||||
seq2  -TGAA-ACTGCA-ACAGTCTCAG  1104