BAC Information

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BAC

Clone NameB6Ng01-114O19
Chromosome3 (Build37)
Map Location 14,631,322 - 14,632,368
singlet/doubletsinglet
Overlap genenone
Upstream gene0710005M24Rik, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929
Downstream geneCar13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114O19.bB6Ng01-114O19.g
ACCDH920320DH920321
length9981,044
definitionDH920320|Mus musculus domesticus DNA, BAC clone: B6Ng01-114O19, 5' end.DH920321|Mus musculus domesticus DNA, BAC clone: B6Ng01-114O19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaaagcatctgggcctggggatgtttgggttgggagcc
atttaattactgcttctatttccttaggtgttgtgggactatttagatgg
tttatctgaccctgatttaactttgttacctggtatctgtctagaaaatc
atcgatttcatccagatgtttttagtttgattgagtatagacttttgtag
taggatctcatgattttttgaattccttcaatttctgttgttatgtctcc
cttttcatatctgattctgttaatgaagatactgtttctgttccctctgg
ttagtctggctaagggtttatctatcctgttgattttctcaaaggacaag
gtcctggttttcttgattctatgtatagttttctttgttgtatttggttg
atttcagccctgagtttgattatttcctgctatctactccacttgggtgt
atttgcttctttttgttctagagctttcatatatgctggtaatctgctag
tgtattctctctccaatttcttcatagaggcactcagtgctatgaatttt
cctcttagcactgttttcattgtgtcccaaaagattaggtatgttgtgcc
ttcatttttattaaattgtaaaaagtccttaatttctttctttatttctt
ccttgatcaagttatcagtgcccatgtgtctgtgggctttctgttgtttc
ttgtttctttgttgaagaccagccttagtctgtggtgatcttgataggat
acatgtggatttttcaatcttcttgtattgggttgaggattatttttgtg
tccaattacatgggtcaatttttgagaaggaaccatggaggtgcctgaga
ggatggatattaatttggttttagagtgaaatgttcctgtagaaacccgt
taaagcccttttggttagtacttctgttattttctcttgttgtcttttgc
ttttaattctgaatttcatgattcaattccatttgcttatgagtgggg
gaattcaggtccttgctccagagagaaagtatgacagagtcgctgaagag
agtcagaatgcatatggcagagcagagaatatcttttcagaccttctaag
gatgagagaggttcagagcaagagcctacagccaggctttttcactttcc
agttgagatatcctggttctgagaagtcagcggggtcaggactgacacca
tgcctgtcagcatctatgagagtagttctgaagagaagctgaatgcttac
agtacattcttacaattcccatcagacactactatgtttttagtgttaga
attaggtctccatatgtccatatgcaaaggtcttgtgccttatgtagtct
tagtagtgattctattaacgttctgtgcttaactgctgttctgattttat
agtccatctacagtcaattttacatacctggatcccttcacttgttctct
gagttataaaagtcacaagaattcagaacaacccaggacccatcacagaa
attattttagagactcatctcttgagggagggtcgtttggtagcattaac
cctgcaattctccaggaaaaaaaaatcaactccatcattttgggtcaaat
ttaaagcaagcatttattaaatattaagcaccgatcaagggaaaattccc
tgaaagttcccaaatggaatggtctcaagccacatgttgcaggtgcttat
gaggacaagcctataggccactgtattttccctggaggctttgttatttc
ccaagaactacaattcccagcattccaggaagttacctggttccggagca
cgtggggcttataggttattttttggggaattacagtaccaaataagacc
atctagtgattgccatatccagggatccatcccataatcagcttccaaac
gctgacaccattgcacacactagcaagattttgctgaaaggacccagatg
tagctttcttcttgtgagactatgctggggcctagcaaaccacagaagtg
gatgctcacattcagctatgatggatcacagcctccaatgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14631322_14632368
seq2: B6Ng01-114O19.g_70_1113 (reverse)

seq1  TCCTCCATTGGAGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCC  50
      |||| |||||||||  ||||||||||||  |||||||| |||||||||||
seq2  TCCT-CATTGGAGG--CTGTGATCCATC--ATAGCTGAATGTGAGCATCC  45

seq1  ACTTCTGT-GTTTGCTAGGCCCCAGCATAGTCTCACAAG-AGATAGCTAC  98
      |||||||| |||||||||||||||||||||||||||||| ||| ||||||
seq2  ACTTCTGTGGTTTGCTAGGCCCCAGCATAGTCTCACAAGAAGAAAGCTAC  95

seq1  ATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTGTGCAATGGTGTCAGCG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTGTGCAATGGTGTCAGCG  145

seq1  TTTGGAAGCTGATTATGGGATGGATCCCTGGATATGGCAATCACTAGATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGCTGATTATGGGATGGATCCCTGGATATGGCAATCACTAGATG  195

seq1  GTCTTATTTGGTACTGTAATTCCCCAAAAAATAACCTATAAGCCCCACCT  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTCTTATTTGGTACTGTAATTCCCCAAAAAATAACCTATAAGCCCCACGT  245

seq1  GCTCCGGAACCAGGTAACTTCCTGGAATGCTGGGAATTGTAGTTCTTGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGGAACCAGGTAACTTCCTGGAATGCTGGGAATTGTAGTTCTTGGG  295

seq1  AAATAACAAAGCCTCCAGGGAAAATACAGTGGCCTATAGGCTTGTCCTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAAAGCCTCCAGGGAAAATACAGTGGCCTATAGGCTTGTCCTCA  345

seq1  TAAGCACCTGCAACATGTGGCTTGAGACCATTCCATTTGGGAACTTTCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACCTGCAACATGTGGCTTGAGACCATTCCATTTGGGAACTTTCAG  395

seq1  GGAATTTTCCCTTGATCGGTGCTTAATATTTAATAAATGCTTGCTTTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTCCCTTGATCGGTGCTTAATATTTAATAAATGCTTGCTTTAAA  445

seq1  TTTGACCCAAAATGATGGAGTTGATTTTTTTTTCCTGGAGAATTGCAGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCCAAAATGATGGAGTTGATTTTTTTTTCCTGGAGAATTGCAGGG  495

seq1  TTAATGCTACCAAACGACCCTCCCTCAAGAGATGAGTCTCTAAAATAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTACCAAACGACCCTCCCTCAAGAGATGAGTCTCTAAAATAATT  545

seq1  TCTGTGATGGGTCCTGGGTTGTTCTGAATTCTTGTGACTTTTATAACTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATGGGTCCTGGGTTGTTCTGAATTCTTGTGACTTTTATAACTCA  595

seq1  GAGAACAAGTGAAGGGATCCAGGTATGTAAAATTGACTGTAGATGGACTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAAGTGAAGGGATCCAGGTATGTAAAATTGACTGTAGATGGACTA  645

seq1  TAAAATCAGAACAGCAGTTAAGCACAGAACGTTAATAGAATCACTACTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAGAACAGCAGTTAAGCACAGAACGTTAATAGAATCACTACTAA  695

seq1  GACTACATAAGGCACAAGACCTTTGCATATGGACATATGGAGACCTAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACATAAGGCACAAGACCTTTGCATATGGACATATGGAGACCTAATT  745

seq1  CTAACACTAAAAACATAGTAGTGTCTGATGGGAATTGTAAGAATGTACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACTAAAAACATAGTAGTGTCTGATGGGAATTGTAAGAATGTACTG  795

seq1  TAAGCATTCAGCTTCTCTTCAGAACTACTCTCATAGATGCTGACAGGCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTCAGCTTCTCTTCAGAACTACTCTCATAGATGCTGACAGGCAT  845

seq1  GGTGTCAGTCCTGACCCCGCTGACTTCTCAGAACCAGGATATCTCAACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCAGTCCTGACCCCGCTGACTTCTCAGAACCAGGATATCTCAACTG  895

seq1  GAAAGTGAAAAAGCCTGGCTGTAGGCTCTTGCTCTGAACCTCTCTCATCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGAAAAAGCCTGGCTGTAGGCTCTTGCTCTGAACCTCTCTCATCC  945

seq1  TTAGAAGGTCTGAAAAGATATTCTCTGCTCTGCCATATGCATTCTGACTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGTCTGAAAAGATATTCTCTGCTCTGCCATATGCATTCTGACTC  995

seq1  TCTTCAGCGACTCTGTCATACTTTCTCTCTGGAGCAAGGACCTGAATTC  1047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCGACTCTGTCATACTTTCTCTCTGGAGCAAGGACCTGAATTC  1044