BAC Information

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BAC

Clone NameB6Ng01-115C06
Chromosome3 (Build37)
Map Location 71,665,141 - 71,665,665
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667377, LOC667385
Downstream geneLOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115C06.bB6Ng01-115C06.g
ACCDH920482DH920483
length9931,186
definitionDH920482|Mus musculus domesticus DNA, BAC clone: B6Ng01-115C06, 5' end.DH920483|Mus musculus domesticus DNA, BAC clone: B6Ng01-115C06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccgagacttttatcatgaattggtgttggattttg
tcaaatgctttctccacatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgaaggattttcgtatattaaact
atccctgcatccctggaataaaacctacttggtcaggatgcatgattgtt
ttgatgtgttcttggattcggttagcaagaattttattgagtatttttgc
atcgatattcattagggaaattggtctgaagttctgtacctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
gggacagtaccttctacttctattttgtggaatagtttgtgcagaactgg
gaatagatcttctttgaagttctgatagaactatgcactaaacccatctg
gtcctgggctttttttttttggttcggagacaattattgactgcttctat
ttctttaggagatatgggactgtttagattgttaacttgatcctggttta
actttggtacctggtatctgtctagaaatttgtccattttttccgggttt
tccagttctgttgagtatatctttttgtagaaggatctgatggtgttttg
gatttcttcagggtttgttgttatgtctcccttttcatttctgattttgt
taattaggatgctgtccttgtgccctctagtgagtctggctaagggttta
tctatcttgttgattttctcaaagaaccagctccttgtttgtttgattct
ttgaatagttcttcttgtttccacttggttgatttcgcccctgagtttga
ttatttcctggcctctacttctctacgtgaatttgcttccattttttcta
gagctttaagtgtattgtcaagctgctagtgtgtgctctctctagtttct
ttttggaggcactcagagctatgagttttctcttagaatgctt
gaattcttctgatctaaaggatatacaggtacaaaaatggagcagaaact
aaaggaaaggccatccagacaccacttcatctagggatcccttctaccta
aaaacacaaagccctgacactgttgggaaggccaagaagtatttgctgaa
aggagccaagtatagctgttccctgagaggctctgctagcacctgacaaa
tacagatgcagatactcacagccaaccatcagattgattccaggaaccac
aaaggaataataaggggaagaactgaagaactgcaacaccaaagaaagat
caacaatatcagttacttggacaacccagagctcctagagatagatccac
caaagagtacacatgcagggatccatggcttgagctatatttttagctga
gaattaccttatctggcattaatgagatgggaggacctatgtcatgtgga
ggctataccctagcatgaggggacactagagtgatgagataggaatgcag
agtgggtaggaagcacccttaaagaggcaaagtggaggaggtgtaatggg
ggaaattatggaggctaaaccagggaggaggataacattggaaatgtaaa
tagacaaagtaaccaattaaaaaataaaaaacttttttttcagaccatgg
aatctatcataagctatgcataaccaaaaaaaggaagaaaaacagagaaa
aagaaaagaaaacaaaaacagagccaattctaggaacatataaatcctag
gaaatcacaggaattgccagaaataagcatcactgacataatacaaagat
agatagatagatagatagatagatagatagatagatagatagatagatag
attagattagataaataaataaataaaataaaaagggagagagaattcca
ggcatagaagatttgaaagaagaaattgatgcatcagttttaaaaatgct
aaatctaaaagttcatgacattaaaaaaatggggacacacaaaagaccaa
actaagagtcatcattgtacttcccagcagaggaaaggagtctgctgtcc
agagcgctttgcttgacattgcagagatattctggttcagacccaccgag
tttattccaacaagcgactgcactttcatgcaagaaagggattctgctgt
gcggaacattgctgaactatcgtagacgacatcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71665141_71665665
seq2: B6Ng01-115C06.b_46_574 (reverse)

seq1  ATCTAAACAGTCCCATATCACCAAAAGAAATAGAAGCAGTTATTAATAGT  50
      ||||||||||||||||||| || ||||||||||||||||| | |||| ||
seq2  ATCTAAACAGTCCCATATCTCCTAAAGAAATAGAAGCAGTCAATAATTGT  50

seq1  CTCCCAACC----AAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGT  96
      |||| ||||    ||||||||||||||||||||||||||||||||| |||
seq2  CTCCGAACCAAAAAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCATAGT  100

seq1  TCTATCAGACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTT  146
      ||||||||| |||||||||||||||| | ||| |||||||||||||||| 
seq2  TCTATCAGAACTTCAAAGAAGATCTATTCCCAGTTCTGCACAAACTATTC  150

seq1  CACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCAC  196
      |||||||||||||||||||||||| | ||||||||||| |||||||||||
seq2  CACAAAATAGAAGTAGAAGGTACTGTCCCCAACTCATTCTATGAAGCCAC  200

seq1  TATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACT  246
       ||||||||||||||||||||||||||||||||||||||| || ||||||
seq2  AATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGGTACAGAACT  250

seq1  TCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATT  296
      ||||||||||||| || |||||||||||||||||||| ||||||||||||
seq2  TCAGACCAATTTCCCTAATGAATATCGATGCAAAAATACTCAATAAAATT  300

seq1  CTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCA  346
      || ||||||||||||||||||||||| ||| ||||||| |||||||||||
seq2  CTTGCTAACCGAATCCAAGAACACATCAAAACAATCATGCATCCTGACCA  350

seq1  AGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCA  396
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  AGTAGGTTTTATTCCAGGGATGCAGGGATAGTTTAATATACGAAAATCCT  400

seq1  TCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATC  446
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATC  450

seq1  ATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCAT  496
      |||||||||||||  || |||||||||||||| |||||||||| ||||||
seq2  ATCTCGTTAGATGTGGAGAAAGCATTTGACAAAATCCAACACCAATTCAT  500

seq1  GATAAAAGTTTTGGAAAGATCAGGAATTC  525
      ||||||||| | |||||||||||||||||
seq2  GATAAAAGTCTCGGAAAGATCAGGAATTC  529