BAC Information

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BAC

Clone NameB6Ng01-115P22
Chromosome3 (Build37)
Map Location 18,029,131 - 18,029,976
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115P22.bB6Ng01-115P22.g
ACCDH921109DH921110
length1,166848
definitionDH921109|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P22, 5' end.DH921110|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacacccctaagccccttaccccataaaaccccctagcttttga
gccttgtggcccggcatccgttatctcctgtgtgggatacatgtcggtcc
agagctccgtaattaaacgtcctcatgtaattacagcaagttgggtcctc
gtgtttcttttggtgctctcacactcccgagactagagtgggggtccccg
aaagggggtcttacaacacattcacactttggtcttcctactttttgagc
ttcatgtggtctgtgactagtatcatgggctttccaagcttttttcgtaa
tatccacttatcagtgagtgcataccatgtgtgttattttatgactggat
tacctcactcaggatgatattttctagttccatctatttgcctaagaatt
tcatgaagtcattaattttaatagctgagtagtactccattgtataaatg
taccacaattatctaatccattcctctcttgagggacatctggtttgtct
ccagcttctggctattataaataaggctgcaataaacatagtgaagcatg
tgcccttgtgatatgttggagagtcttctgggtacatgcccaggagtggt
atagatgggtcctcaggtagtactatgtcaaattttctaaggaaatgcca
gactgatttgcagagtggttgtacctgcttgcaatcccaccaccaatgaa
agagtgttcctctttctctacatccttgccagcatctgctgttaccttag
tttttgatcttagcccttctgactggtgtgaggtggaatctcagggttgt
tttgatttgcatttccctgatgtctaaggatgttgaacattttccttagg
tgcttctcatctattacggattttctcagttcagaattctttgtttagct
ctgtatcccatttttaatagagttgattctctgaagtctatatattgggt
attagccctctatctgatgtaggttgatagggatcatttccaatctgtgg
tttcgtatttgtcctattgatagagtcctttcttacagaggccttgcaat
tttattacttcaattgtctatttgtaatctcaagagcataaggcaatgga
gttcctgtctaagattttcccttggccaatgtcagccttcctcactttct
tcttataagttaatgt
gaattctatgacaatgagggaattagaactcactctcttacagagcttta
agttagtaaatgaaataaattcatatgctagggtgcacacatttcatttg
aaatttcgagactagaaatgaatgctacataataaggggtgtgtagcggg
actagctaacaacatgtgctgttcaccgttgtgcacatcattactttagc
aagccaactaaccatactgctgcgtagcaatgacactcagcatcagctca
tggccctggttgcagggattgctggtatgttagagaagcctactattacg
atcaaagttcaaaatgtcagggtagctctccaagctgtctctccgaagct
gactctcggaggttctttctgtcatactcacagctttcctaatcctgctt
actgattctgctcctgatgcccctgtaaaaagggagcgccatcctgatga
accaaccccaaggcatgagaccgggagagccaatgggctgactacttaga
tacatattagagtcagactcagggatttaaatttgcccaccccaacatct
aacctgttaatgaactgctaaagtacatgaagtggcaggtcctacaaatc
caaaattaaaagatctccatgacacagggcaagaacaggaaatctaagag
gagtcccagtgaggttccaatattgatggagtagcaaaagccagagaggc
cttataccagaccaatgagtcatttcaataaacatctgcaagcaaagaag
tgtggacagaagggtatactgtgtgacatgctatgacacagtacagcttc
cacaatgagttttttgtctctgttgggggcggggggaggggggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18029131_18029976
seq2: B6Ng01-115P22.g_68_915 (reverse)

seq1  CACCTCCCCC--TCCCCCGCCCCCAACAGAGACAAAAAACTCATTGTGGA  48
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCCCCTCCCCCCGCCCCCAACAGAGACAAAAAACTCATTGTGGA  50

seq1  AGCTGTACTGTGTCATAGCATGTCACACAGTATACCCTTCTGTCCACACT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTACTGTGTCATAGCATGTCACACAGTATACCCTTCTGTCCACACT  100

seq1  TCTTTGCTTGCAGATGTTTATTGAAATGACTCATTGGTCTGGTATAAGGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTGCAGATGTTTATTGAAATGACTCATTGGTCTGGTATAAGGC  150

seq1  CTCTCTGGCTTTTGCTACTCCATCAATATTGGAACCTCACTGGGACTCCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGCTTTTGCTACTCCATCAATATTGGAACCTCACTGGGACTCCT  200

seq1  CTTAGATTTCCTGTTCTTGCCCTGTGTCATGGAGATCTTTTAATTTTGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATTTCCTGTTCTTGCCCTGTGTCATGGAGATCTTTTAATTTTGGA  250

seq1  TTTGTAGGACCTGCCACTTCATGTACTTTAGCAGTTCATTAACAGGTTAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGGACCTGCCACTTCATGTACTTTAGCAGTTCATTAACAGGTTAG  300

seq1  ATGTTGGGGTGGGCAAATTTAAATCCCTGAGTCTGACTCTAATATGTATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGGTGGGCAAATTTAAATCCCTGAGTCTGACTCTAATATGTATC  350

seq1  TAAGTAGTCAGCCCATTGGCTCTCCCGGTCTCATGCCTTGGGGTTGGTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGTCAGCCCATTGGCTCTCCCGGTCTCATGCCTTGGGGTTGGTTC  400

seq1  ATCAGGATGGCGCTCCCTTTTTACAGGGGCATCAGGAGCAGAATCAGTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATGGCGCTCCCTTTTTACAGGGGCATCAGGAGCAGAATCAGTAA  450

seq1  GCAGGATTAGGAAAGCTGTGAGTATGACAGAAAGAACCTCCGAGAGTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATTAGGAAAGCTGTGAGTATGACAGAAAGAACCTCCGAGAGTCAG  500

seq1  CTTCGGAGAGACAGCTTGGAGAGCTACCCTGACATTTTGAACTTTGATCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGAGAGACAGCTTGGAGAGCTACCCTGACATTTTGAACTTTGATCG  550

seq1  TAATAGTAGGCTTCTCTAACATACCAGCAATCCCTGCAACCAGGGCCATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTAGGCTTCTCTAACATACCAGCAATCCCTGCAACCAGGGCCATG  600

seq1  AGCTGATGCTGAGTGTCATTGCTACGCAGCAGTATGGTTAGTTGGCTTGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGCTGAGTGTCATTGCTACGCAGCAGTATGGTTAGTTGGCTTGC  650

seq1  TAAAGTAATGATGTGCACAACGGTGAACAGCACATGTTGTTAGCTAGTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAATGATGTGCACAACGGTGAACAGCACATGTTGTTAGCTAGTCC  700

seq1  CGCTACACACCCCTTATTATGTAGCATTCATTTCTAGTCTCGAAATTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTACACACCCCTTATTATGTAGCATTCATTTCTAGTCTCGAAATTTCA  750

seq1  AATGAAATGTGTGCACCCTAGCATATGAATTTATTTCATTTACTAACTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGTGTGCACCCTAGCATATGAATTTATTTCATTTACTAACTTA  800

seq1  AAGCTCTGTAAGAGAGTGAGTTCTAATTCCCTCATTGTCATAGAATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGTAAGAGAGTGAGTTCTAATTCCCTCATTGTCATAGAATTC  848