BAC Information

Click to search

BAC

Clone NameB6Ng01-116H03
Chromosome3 (Build37)
Map Location 76,792,670 - 76,793,697
singlet/doubletsinglet
Overlap geneLOC100041635
Upstream geneFstl5, LOC100041625
Downstream geneDnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116H03.bB6Ng01-116H03.g
ACCDH921442DH921443
length1,0191,096
definitionDH921442|Mus musculus domesticus DNA, BAC clone: B6Ng01-116H03, 5' end.DH921443|Mus musculus domesticus DNA, BAC clone: B6Ng01-116H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattaatccc
ctatctgatttaggataggtaaagatcctttaccaatctgttggtggttt
ttttttttttttttttatcttattgatggtgtcttttgccttgcagaagc
tttgcagtttcatgaggtcccatttgtcaattctcggtcttacagcgcaa
ttttttttatgacagtagaaactctactcatactaaattattttctttct
ttttgtattcctcaatggtatcacatacaatgaaactgtttatttcagta
attttcttcatatgaacaaaagaagtgcaactcagacgaagatggaccaa
ttattgtaaagaataccaaatttgaaacataaaaagtctttaatttatac
tttcatttactgaaaggcacactgatgttatttttcttaaattcttactt
tttgttcaaactcttagttgaaaataaatgcaggggtaggttataaaaaa
tattgtataacagattatgccacacaagacaggagaattaaagacttata
taaaaaaatcttatgagcaagagctcaggtttagaaaataccaatatagt
gttgatagatagaactatgttaaatctcttttctttgaaaatatattttg
gtaaggttcataaatcaacataaggaaaaatattaaaaatagatctcact
tttaatgtagtcaccaaattagtataaaatgggcatgtttgaattgcagg
aggaaatttgacatatggacttgaaaatagagaaatagaaaagacataaa
ttaaaaatttaaacagtatctatgaagatatcctaaaataaagatagtat
ggaaccataactggcccaaatacatccactaaagattataaacttttgaa
agcttttagtacatggtagatggagttctgtcttgtgatggatgaatgag
attgtcagacccagagaag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctcttaaaaagaacgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctatggatggatcacagggctcccaa
tggaggagctagagaaagtacccaggagctaaagggatctgcaaccctat
agtggatcaacattatgtactaccagtacccggagctcttgactctagct
gcatattatcaaaagatggcctaatccgcctacatgggaaagagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76792670_76793697
seq2: B6Ng01-116H03.b_43_1061

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAATCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTACCAATCTGTTGGTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTACCAATCTGTTGGTGGTTT  150

seq1  TTTTTTTTTTTTTTTTATCTTATTGATGGTGTCTTTTGCCTTGCAGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTATCTTATTGATGGTGTCTTTTGCCTTGCAGAAGC  200

seq1  TTTGCAGTTTCATGAGGTCCCATTTGTCAATTCTCGGTCTTACAGCGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTTTCATGAGGTCCCATTTGTCAATTCTCGGTCTTACAGCGCAA  250

seq1  TTTTTTTTATGACAGTAGAAACTCTACTCATACTAAATTATTTTCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATGACAGTAGAAACTCTACTCATACTAAATTATTTTCTTTCT  300

seq1  TTTTGTATTCCTCAATGGTATCACATACAATGAAACTGTTTATTTCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTCCTCAATGGTATCACATACAATGAAACTGTTTATTTCAGTA  350

seq1  ATTTTCTTCATATGAACAAAAGAAGTGCAACTCAGACGAAGATGGACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCATATGAACAAAAGAAGTGCAACTCAGACGAAGATGGACCAA  400

seq1  TTATTGTAAAGAATACCAAATTTGAAACATAAAAAGTCTTTAATTTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTAAAGAATACCAAATTTGAAACATAAAAAGTCTTTAATTTATAC  450

seq1  TTTCATTTACTGAAAGGCACACTGATGTTATTTTTCTTAAATTCTTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTACTGAAAGGCACACTGATGTTATTTTTCTTAAATTCTTACTT  500

seq1  TTTGTTCAAACTCTTAGTTGAAAATAAATGCAGGGGTAGGTTATAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAAACTCTTAGTTGAAAATAAATGCAGGGGTAGGTTATAAAAAA  550

seq1  TATTGTATAACAGATTATGCCACACAAGACAGGAGAATTAAAGACTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATAACAGATTATGCCACACAAGACAGGAGAATTAAAGACTTATA  600

seq1  TAAAAAAATCTTATGAGCAAGAGCTCAGGTTTAGAAAATACCAATATAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATCTTATGAGCAAGAGCTCAGGTTTAGAAAATACCAATATAGT  650

seq1  GTTGATAGATAGAACTATGTTAAATCTCTTTTCTTTGAAAATATATTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAGATAGAACTATGTTAAATCTCTTTTCTTTGAAAATATATTTTG  700

seq1  GTAAGGTTCATAAATCAACATAAGGAAAAATATTAAAAATAGATCTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTTCATAAATCAACATAAGGAAAAATATTAAAAATAGATCTCACT  750

seq1  TTTAATGTAGTCACCAAATTAGTATAAAATGGGCATGTTTGAATTGCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTAGTCACCAAATTAGTATAAAATGGGCATGTTTGAATTGCAGG  800

seq1  AGGAAATTTGACATATGGACTTGAAAATAGAGAAATAGAAAAGACATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTTGACATATGGACTTGAAAATAGAGAAATAGAAAAGACATAAA  850

seq1  TTAAAAATTTAAAACAGTATCTATGAAGATATCCTAAAATAAAGATAGTA  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTT-AAACAGTATCTATGAAGATATCCTAAAATAAAGATAGTA  899

seq1  TGGAACCATAACTGGCCCAAATACATCCACTAAAAGATTATAAACTTTTG  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGAACCATAACTGGCCCAAATACATCCACT-AAAGATTATAAACTTTTG  948

seq1  AAAAGCTTTTAGGTACAATGGTAGAATGGAAGTTCTGTCTTGTGATGGAT  1000
       |||||||||| |||| ||||||| |||| ||||||||||||||||||||
seq2  -AAAGCTTTTA-GTAC-ATGGTAG-ATGG-AGTTCTGTCTTGTGATGGAT  993

seq1  GAAATGAGAATTGTCAGGACCCCAGAAG  1028
      | |||||| ||||||||  ||  |||||
seq2  G-AATGAG-ATTGTCAGACCCAGAGAAG  1019