BAC Information

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BAC

Clone NameB6Ng01-116H24
Chromosome3 (Build37)
Map Location 119,937,667 - 119,938,761
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116H24.g
ACCDH921482
length1,091
definitionDH921482|Mus musculus domesticus DNA, BAC clone: B6Ng01-116H24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagcagtcccacttgcccctccatgcaacaacactgaacagcc
aattggaatccctggcctcagcccttcattgcatcatcatggtttatagt
ccataacgaggaaaatatagaaaagagccataatgacctgctatgtctga
cctaccatctctccttccagggctttgcctaatgagtttgcttcttctct
acatggggcaaaagcaaagagagcacgctctggagttgccctcctaaggc
ctgaccccaggtccccagtccataccatgtcctagccatcaccacagtag
gcagccctctcttgtaggataagcagtcatttctgtaaggtctcccacaa
acaaggcttgttgatgtcagcccaaaagtggcttcccactgtggtgagac
atcccagtagcttttataaagcattactgtcttccttcctggagctgaca
ggtaacttgggccctggaaagagtctgataaattaaagggtactaaatgg
ggaaaagttgttgtgaaggaggggttttgttcccagtttgcagaaatgga
ttgtctttctctcagattgttcataatcctggggaatttgataatcaatt
tccatttccttcacataactaatccccatcaaagtcaaattaagtgatta
ttggaaagtgttgtatggtattttttgtttttgtttttcattttttttgt
ttttttttatttctactatcctctcatcttttcgactataatcaaacatg
tggcatttataatatacctttacctatattttaatgaataaaccaagcaa
atatactgctacatttttaacaaattgcctttgagattggcatgccaaga
aaatctactacatacctcacacgttatttgtttcttgagggcacttactt
attttgttaataaccaaattagagtgaaaaatacagtcccttaaagagtt
agggttaaggttcttagaaagactgttctaatgcactgataagggtctga
cagaatggctgaccaggttcagtcctgtcaaagcatgaaacttgatctgg
tatctttgaagtcgtgtagagccggtggtagaattcactct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119937667_119938761
seq2: B6Ng01-116H24.g_65_1155 (reverse)

seq1  AGAGTGAATTCTTCCCACCCGCTCTTACACGGCCTCCAAAGATA-CAGAT  49
      ||||||||||| | ||||| |||| ||||| | || |||||||| |||||
seq2  AGAGTGAATTC-TACCACCGGCTC-TACAC-GACTTCAAAGATACCAGAT  47

seq1  CAGGTTTTCATGCTTTGACAGGACTGACCCTTGTTCAGCCATCTTGTCAG  99
      || | |||||||||||||||||||||| || || ||||||||  ||||||
seq2  CAAG-TTTCATGCTTTGACAGGACTGAACC-TGGTCAGCCATTCTGTCAG  95

seq1  CCCCTTTTCAGTGCATTTGAAACAGTCTTTCTTAGAACCTTAA-CCTAAC  148
       ||||| |||||||||| | |||||||||||| |||||||||| ||||||
seq2  ACCCTTATCAGTGCATTAG-AACAGTCTTTCTAAGAACCTTAACCCTAAC  144

seq1  TCTTTAAGGGACTGTATTTTTCACTCTTAATTTGTTATTAACAAAATAAG  198
      ||||||||||||||||||||||||||| | || |||||||||||||||||
seq2  TCTTTAAGGGACTGTATTTTTCACTCTAATTTGGTTATTAACAAAATAAG  194

seq1  TAAGTGCCCTCAAG-AACAAATAACGTTGTGAGGTATGTAGTAGA-TTTC  246
      |||||||||||||| ||||||||||| |||||||||||||||||| ||||
seq2  TAAGTGCCCTCAAGAAACAAATAACG-TGTGAGGTATGTAGTAGATTTTC  243

seq1  TTGGCATGCCAATCTCAAAGGCAATTTGTTTAAAAATGTAGCAGTATATT  296
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGGCATGCCAATCTCAAAGGCAATTTG-TTAAAAATGTAGCAGTATATT  292

seq1  TGCTTGGTTTATTCATTAAAATATAGGTAAAGGTATATTATAAATGCCAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGTTTATTCATTAAAATATAGGTAAAGGTATATTATAAATGCCAC  342

seq1  ATGTTTGATTATAGTCGAAAAGATGAGAGGATAGTAGAAATAAAAAAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGATTATAGTCGAAAAGATGAGAGGATAGTAGAAATAAAAAAAAA  392

seq1  CAAAAAAAATGAAAAACAAAAACAAAAAATACCATACAACACTTTCCAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAATGAAAAACAAAAACAAAAAATACCATACAACACTTTCCAAT  442

seq1  AATCACTTAATTTGACTTTGATGGGGATTAGTTATGTGAAGGAAATGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTAATTTGACTTTGATGGGGATTAGTTATGTGAAGGAAATGGAA  492

seq1  ATTGATTATCAAATTCCCCAGGATTATGAACAATCTGAGAGAAAGACAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATCAAATTCCCCAGGATTATGAACAATCTGAGAGAAAGACAAT  542

seq1  CCATTTCTGCAAACTGGGAACAAAACCCCTCCTTCACAACAACTTTTCCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTGCAAACTGGGAACAAAACCCCTCCTTCACAACAACTTTTCCC  592

seq1  CATTTAGTACCCTTTAATTTATCAGACTCTTTCCAGGGCCCAAGTTACCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGTACCCTTTAATTTATCAGACTCTTTCCAGGGCCCAAGTTACCT  642

seq1  GTCAGCTCCAGGAAGGAAGACAGTAATGCTTTATAAAAGCTACTGGGATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTCCAGGAAGGAAGACAGTAATGCTTTATAAAAGCTACTGGGATG  692

seq1  TCTCACCACAGTGGGAAGCCACTTTTGGGCTGACATCAACAAGCCTTGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCACAGTGGGAAGCCACTTTTGGGCTGACATCAACAAGCCTTGTT  742

seq1  TGTGGGAGACCTTACAGAAATGACTGCTTATCCTACAAGAGAGGGCTGCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGACCTTACAGAAATGACTGCTTATCCTACAAGAGAGGGCTGCC  792

seq1  TACTGTGGTGATGGCTAGGACATGGTATGGACTGGGGACCTGGGGTCAGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGTGATGGCTAGGACATGGTATGGACTGGGGACCTGGGGTCAGG  842

seq1  CCTTAGGAGGGCAACTCCAGAGCGTGCTCTCTTTGCTTTTGCCCCATGTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGAGGGCAACTCCAGAGCGTGCTCTCTTTGCTTTTGCCCCATGTA  892

seq1  GAGAAGAAGCAAACTCATTAGGCAAAGCCCTGGAAGGAGAGATGGTAGGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGCAAACTCATTAGGCAAAGCCCTGGAAGGAGAGATGGTAGGT  942

seq1  CAGACATAGCAGGTCATTATGGCTCTTTTCTATATTTTCCTCGTTATGGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATAGCAGGTCATTATGGCTCTTTTCTATATTTTCCTCGTTATGGA  992

seq1  CTATAAACCATGATGATGCAATGAAGGGCTGAGGCCAGGGATTCCAATTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACCATGATGATGCAATGAAGGGCTGAGGCCAGGGATTCCAATTG  1042

seq1  GCTGTTCAGTGTTGTTGCATGGAGGGGCAAGTGGGACTGCTATGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCAGTGTTGTTGCATGGAGGGGCAAGTGGGACTGCTATGAATTC  1091